RNA–Protein interactions for RNA: ENST00000592741.5

PRKCSH-217, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKCSH, Length 2,100 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-217ENST00000592741 RARS2Q5T160 578 aaKnown RBP16.53■□□□□ 0.24
PRKCSH-217ENST00000592741 LPCAT1Q8NF37 534 aa16.53■□□□□ 0.24
PRKCSH-217ENST00000592741 NSMCE3Q96MG7 304 aa16.53■□□□□ 0.24
PRKCSH-217ENST00000592741 UNC93B1Q9H1C4 597 aa16.53■□□□□ 0.24
PRKCSH-217ENST00000592741 CWH43Q9H720 699 aa16.53■□□□□ 0.24
PRKCSH-217ENST00000592741 MID1IP1Q9NPA3 183 aa16.53■□□□□ 0.24
PRKCSH-217ENST00000592741 EPS15L1Q9UBC2 864 aa16.53■□□□□ 0.24
PRKCSH-217ENST00000592741 SUCOQ9UBS9 1254 aaKnown RBP16.53■□□□□ 0.24
PRKCSH-217ENST00000592741 SARDHQ9UL12 918 aa16.53■□□□□ 0.24
PRKCSH-217ENST00000592741 VPS9D1Q9Y2B5 631 aa16.53■□□□□ 0.24
PRKCSH-217ENST00000592741 CEP350Q5VT06 3117 aa16.53■□□□□ 0.24
PRKCSH-217ENST00000592741 SUPT3HB4E1H0 165 aa16.52■□□□□ 0.24
PRKCSH-217ENST00000592741 CBX4O00257 560 aa16.52■□□□□ 0.24
PRKCSH-217ENST00000592741 SUPT3HO75486 399 aa16.52■□□□□ 0.24
PRKCSH-217ENST00000592741 CDK14O94921 469 aa16.52■□□□□ 0.24
PRKCSH-217ENST00000592741 KLKB1P03952 638 aa16.52■□□□□ 0.24
PRKCSH-217ENST00000592741 FGF4P08620 206 aa16.52■□□□□ 0.24
PRKCSH-217ENST00000592741 MTHFD2P13995 350 aa16.52■□□□□ 0.24
PRKCSH-217ENST00000592741 PSMD8P48556 350 aa16.52■□□□□ 0.24
PRKCSH-217ENST00000592741 ALDH7A1P49419 539 aaKnown RBP16.52■□□□□ 0.24
PRKCSH-217ENST00000592741 ATP6V0D1P61421 351 aa16.52■□□□□ 0.24
PRKCSH-217ENST00000592741 SH3BP2P78314 561 aa16.52■□□□□ 0.24
PRKCSH-217ENST00000592741 ADGRE1Q14246 886 aa16.52■□□□□ 0.24
PRKCSH-217ENST00000592741 EML3Q32P44 896 aa16.52■□□□□ 0.24
PRKCSH-217ENST00000592741 UGT3A2Q3SY77 523 aa16.52■□□□□ 0.24
PRKCSH-217ENST00000592741 PCDH20Q8N6Y1 951 aaKnown RBP16.52■□□□□ 0.24
PRKCSH-217ENST00000592741 SLAIN1Q8ND83 568 aa16.52■□□□□ 0.24
PRKCSH-217ENST00000592741 CATSPER1Q8NEC5 780 aa16.52■□□□□ 0.24
PRKCSH-217ENST00000592741 MDGA1Q8NFP4 955 aa16.52■□□□□ 0.24
PRKCSH-217ENST00000592741 STAG3L4Q8TBR4 150 aa16.52■□□□□ 0.24
PRKCSH-217ENST00000592741 KIAA1191Q96A73 305 aa16.52■□□□□ 0.24
PRKCSH-217ENST00000592741 BTBD9Q96Q07 612 aa16.52■□□□□ 0.24
PRKCSH-217ENST00000592741 MUC3BQ9H195 1237 aa16.52■□□□□ 0.24
PRKCSH-217ENST00000592741 RNF112Q9ULX5 631 aa16.52■□□□□ 0.24
PRKCSH-217ENST00000592741 RAI2Q9Y5P3 530 aa16.52■□□□□ 0.24
PRKCSH-217ENST00000592741 FBP2O00757 339 aa16.52■□□□□ 0.23
PRKCSH-217ENST00000592741 ACOT8O14734 319 aa16.52■□□□□ 0.23
PRKCSH-217ENST00000592741 MRASO14807 208 aa16.52■□□□□ 0.23
PRKCSH-217ENST00000592741 AZIN1O14977 448 aa16.52■□□□□ 0.23
PRKCSH-217ENST00000592741 PFDN6O15212 129 aa16.52■□□□□ 0.23
PRKCSH-217ENST00000592741 SIX3O95343 332 aaPredicted RBP16.52■□□□□ 0.23
PRKCSH-217ENST00000592741 MT-CO1P00395 513 aa16.52■□□□□ 0.23
PRKCSH-217ENST00000592741 GNRH1P01148 92 aa16.52■□□□□ 0.23
PRKCSH-217ENST00000592741 IRF1P10914 325 aa16.52■□□□□ 0.23
PRKCSH-217ENST00000592741 LPOP22079 712 aaPredicted RBP16.52■□□□□ 0.23
PRKCSH-217ENST00000592741 PSMA3P25788 255 aa16.52■□□□□ 0.23
PRKCSH-217ENST00000592741 ACADVLP49748 655 aa16.52■□□□□ 0.23
PRKCSH-217ENST00000592741 PAQR3Q6TCH7 311 aa16.52■□□□□ 0.23
PRKCSH-217ENST00000592741 CYHR1Q6ZMK1 362 aa16.52■□□□□ 0.23
PRKCSH-217ENST00000592741 SPATA24Q86W54 205 aa16.52■□□□□ 0.23
PRKCSH-217ENST00000592741 ASB9Q96DX5 294 aa16.52■□□□□ 0.23
PRKCSH-217ENST00000592741 DDX50Q9BQ39 737 aaKnown RBP16.52■□□□□ 0.23
PRKCSH-217ENST00000592741 ADGRE3Q9BY15 652 aa16.52■□□□□ 0.23
PRKCSH-217ENST00000592741 GKN1Q9NS71 199 aa16.52■□□□□ 0.23
PRKCSH-217ENST00000592741 AFF4Q9UHB7 1163 aaKnown RBP16.52■□□□□ 0.23
PRKCSH-217ENST00000592741 FAM50BQ9Y247 325 aa16.52■□□□□ 0.23
PRKCSH-217ENST00000592741 ATP6AP2A0A1C7CYW4 349 aa16.51■□□□□ 0.23
PRKCSH-217ENST00000592741 LCHNA4D1U4 455 aa16.51■□□□□ 0.23
PRKCSH-217ENST00000592741 TSPAN3O60637 253 aa16.51■□□□□ 0.23
PRKCSH-217ENST00000592741 RNASEH1O60930 286 aaKnown RBP16.51■□□□□ 0.23
PRKCSH-217ENST00000592741 ATP6AP2O75787 350 aa16.51■□□□□ 0.23
PRKCSH-217ENST00000592741 PRLP01236 227 aa16.51■□□□□ 0.23
PRKCSH-217ENST00000592741 PYGLP06737 847 aa16.51■□□□□ 0.23
PRKCSH-217ENST00000592741 HMGA1P17096 107 aaKnown RBP16.51■□□□□ 0.23
PRKCSH-217ENST00000592741 TCN1P20061 433 aaPredicted RBP16.51■□□□□ 0.23
PRKCSH-217ENST00000592741 TAF12Q16514 161 aa16.51■□□□□ 0.23
PRKCSH-217ENST00000592741 ADGRF1Q5T601 910 aa16.51■□□□□ 0.23
PRKCSH-217ENST00000592741 RNF219Q5W0B1 726 aaPredicted RBP16.51■□□□□ 0.23
PRKCSH-217ENST00000592741 KANK2Q63ZY3 851 aa16.51■□□□□ 0.23
PRKCSH-217ENST00000592741 KIAA1841Q6NSI8 718 aa16.51■□□□□ 0.23
PRKCSH-217ENST00000592741 C16orf59Q7L2K0 433 aa16.51■□□□□ 0.23
PRKCSH-217ENST00000592741 FBXO39Q8N4B4 442 aa16.51■□□□□ 0.23
PRKCSH-217ENST00000592741 TWIST2Q8WVJ9 160 aa16.51■□□□□ 0.23
PRKCSH-217ENST00000592741 C3orf30Q96M34 536 aa16.51■□□□□ 0.23
PRKCSH-217ENST00000592741 TUBGCP5Q96RT8 1024 aa16.51■□□□□ 0.23
PRKCSH-217ENST00000592741 YIPF3Q9GZM5 350 aa16.51■□□□□ 0.23
PRKCSH-217ENST00000592741 HACD3Q9P035 362 aa16.51■□□□□ 0.23
PRKCSH-217ENST00000592741 TBC1D30Q9Y2I9 924 aa16.51■□□□□ 0.23
PRKCSH-217ENST00000592741 DNAJC15Q9Y5T4 150 aa16.51■□□□□ 0.23
PRKCSH-217ENST00000592741 SYCE1LA8MT33 242 aa16.51■□□□□ 0.23
PRKCSH-217ENST00000592741 E7ENX8 843 aa16.51■□□□□ 0.23
PRKCSH-217ENST00000592741 NRP2O60462 931 aa16.51■□□□□ 0.23
PRKCSH-217ENST00000592741 SEC24AO95486 1093 aa16.51■□□□□ 0.23
PRKCSH-217ENST00000592741 ZCCHC18P0CG32 403 aa16.51■□□□□ 0.23
PRKCSH-217ENST00000592741 VCLP18206 1134 aa16.51■□□□□ 0.23
PRKCSH-217ENST00000592741 ATXN3P54252 364 aaPredicted RBP16.51■□□□□ 0.23
PRKCSH-217ENST00000592741 KIF19Q2TAC6 998 aa16.51■□□□□ 0.23
PRKCSH-217ENST00000592741 HACD2Q6Y1H2 254 aa16.51■□□□□ 0.23
PRKCSH-217ENST00000592741 MFN1Q8IWA4 741 aa16.51■□□□□ 0.23
PRKCSH-217ENST00000592741 NKAPQ8N5F7 415 aaKnown RBP16.51■□□□□ 0.23
PRKCSH-217ENST00000592741 TOP1MTQ969P6 601 aa16.51■□□□□ 0.23
PRKCSH-217ENST00000592741 DCUN1D1Q96GG9 259 aa16.51■□□□□ 0.23
PRKCSH-217ENST00000592741 CAPNS2Q96L46 248 aa16.51■□□□□ 0.23
PRKCSH-217ENST00000592741 CFHR5Q9BXR6 569 aa16.51■□□□□ 0.23
PRKCSH-217ENST00000592741 AKTIPQ9H8T0 292 aa16.51■□□□□ 0.23
PRKCSH-217ENST00000592741 SPAG4Q9NPE6 437 aa16.51■□□□□ 0.23
PRKCSH-217ENST00000592741 RIMS3Q9UJD0 308 aa16.51■□□□□ 0.23
PRKCSH-217ENST00000592741 CROTQ9UKG9 612 aa16.51■□□□□ 0.23
PRKCSH-217ENST00000592741 LRRC14BA6NHZ5 514 aa16.5■□□□□ 0.23
PRKCSH-217ENST00000592741 CLASP2O75122 1294 aaKnown RBP16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms