RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 FOXP3Q9BZS1 431 aa10.4□□□□□ -0.74
VPS4B-207ENST00000591519 DPEP2Q9H4A9 486 aa10.4□□□□□ -0.74
VPS4B-207ENST00000591519 WDR26Q9H7D7 661 aa10.4□□□□□ -0.74
VPS4B-207ENST00000591519 NOD2Q9HC29 1040 aa10.4□□□□□ -0.74
VPS4B-207ENST00000591519 EPB41L5Q9HCM4 733 aa10.4□□□□□ -0.74
VPS4B-207ENST00000591519 CYP4F12Q9HCS2 524 aa10.4□□□□□ -0.74
VPS4B-207ENST00000591519 ETNK2Q9NVF9 386 aa10.4□□□□□ -0.74
VPS4B-207ENST00000591519 TRNAU1APQ9NX07 287 aaKnown RBP10.4□□□□□ -0.74
VPS4B-207ENST00000591519 ATXN7L1Q9ULK2 861 aaPredicted RBP10.4□□□□□ -0.74
VPS4B-207ENST00000591519 BZW2Q9Y6E2 419 aaKnown RBP10.4□□□□□ -0.74
VPS4B-207ENST00000591519 RNF215Q9Y6U7 377 aa10.4□□□□□ -0.74
VPS4B-207ENST00000591519 ZNF462Q96JM2 2506 aa10.4□□□□□ -0.75
VPS4B-207ENST00000591519 AHCTF1Q8WYP5 2266 aa10.4□□□□□ -0.75
VPS4B-207ENST00000591519 A8MX80 341 aa10.39□□□□□ -0.75
VPS4B-207ENST00000591519 B4GAT1O43505 415 aa10.39□□□□□ -0.75
VPS4B-207ENST00000591519 RARAP10276 462 aa10.39□□□□□ -0.75
VPS4B-207ENST00000591519 CYP2A6P11509 494 aaPredicted RBP10.39□□□□□ -0.75
VPS4B-207ENST00000591519 CCNB1P14635 433 aa10.39□□□□□ -0.75
VPS4B-207ENST00000591519 IL4RP24394 825 aa10.39□□□□□ -0.75
VPS4B-207ENST00000591519 CDH6P55285 790 aa10.39□□□□□ -0.75
VPS4B-207ENST00000591519 DPTQ07507 201 aa10.39□□□□□ -0.75
VPS4B-207ENST00000591519 SQSTM1Q13501 440 aa10.39□□□□□ -0.75
VPS4B-207ENST00000591519 TRIM14Q14142 442 aa10.39□□□□□ -0.75
VPS4B-207ENST00000591519 ARHGEF7Q14155 803 aa10.39□□□□□ -0.75
VPS4B-207ENST00000591519 TCEA2Q15560 299 aa10.39□□□□□ -0.75
VPS4B-207ENST00000591519 CNGA3Q16281 694 aa10.39□□□□□ -0.75
VPS4B-207ENST00000591519 MARC1Q5VT66 337 aa10.39□□□□□ -0.75
VPS4B-207ENST00000591519 ZNF438Q7Z4V0 828 aa10.39□□□□□ -0.75
VPS4B-207ENST00000591519 HSD11B1LQ7Z5J1 315 aa10.39□□□□□ -0.75
VPS4B-207ENST00000591519 TECPR1Q7Z6L1 1165 aa10.39□□□□□ -0.75
VPS4B-207ENST00000591519 SLITRK4Q8IW52 837 aa10.39□□□□□ -0.75
VPS4B-207ENST00000591519 SFTPA2Q8IWL1 248 aa10.39□□□□□ -0.75
VPS4B-207ENST00000591519 RAVER1Q8IY67 606 aaKnown RBP10.39□□□□□ -0.75
VPS4B-207ENST00000591519 BBS5Q8N3I7 341 aa10.39□□□□□ -0.75
VPS4B-207ENST00000591519 PAF1Q8N7H5 531 aa10.39□□□□□ -0.75
VPS4B-207ENST00000591519 Q8N9G6 341 aaPredicted RBP10.39□□□□□ -0.75
VPS4B-207ENST00000591519 FAM71BQ8TC56 605 aa10.39□□□□□ -0.75
VPS4B-207ENST00000591519 KIAA1524Q8TCG1 905 aa10.39□□□□□ -0.75
VPS4B-207ENST00000591519 PIH1D2Q8WWB5 315 aa10.39□□□□□ -0.75
VPS4B-207ENST00000591519 SYN2Q92777 582 aaPredicted RBP10.39□□□□□ -0.75
VPS4B-207ENST00000591519 IQCDQ96DY2 449 aa10.39□□□□□ -0.75
VPS4B-207ENST00000591519 NUS1Q96E22 293 aa10.39□□□□□ -0.75
VPS4B-207ENST00000591519 DTD2Q96FN9 168 aa10.39□□□□□ -0.75
VPS4B-207ENST00000591519 MED8Q96G25 268 aa10.39□□□□□ -0.75
VPS4B-207ENST00000591519 CMKLR1Q99788 373 aa10.39□□□□□ -0.75
VPS4B-207ENST00000591519 GSDMCQ9BYG8 508 aa10.39□□□□□ -0.75
VPS4B-207ENST00000591519 FRMD8Q9BZ67 464 aaPredicted RBP10.39□□□□□ -0.75
VPS4B-207ENST00000591519 SYNDIG1Q9H7V2 258 aa10.39□□□□□ -0.75
VPS4B-207ENST00000591519 PHPT1Q9NRX4 125 aaPredicted RBP10.39□□□□□ -0.75
VPS4B-207ENST00000591519 SPATS2LQ9NUQ6 558 aaKnown RBP10.39□□□□□ -0.75
VPS4B-207ENST00000591519 SLC17A4Q9Y2C5 497 aa10.39□□□□□ -0.75
VPS4B-207ENST00000591519 B8ZZF3 427 aa10.38□□□□□ -0.75
VPS4B-207ENST00000591519 FZD6O60353 706 aa10.38□□□□□ -0.75
VPS4B-207ENST00000591519 PGLSO95336 258 aa10.38□□□□□ -0.75
VPS4B-207ENST00000591519 CPNE6O95741 557 aa10.38□□□□□ -0.75
VPS4B-207ENST00000591519 CPP00450 1065 aa10.38□□□□□ -0.75
VPS4B-207ENST00000591519 IVLP07476 585 aa10.38□□□□□ -0.75
VPS4B-207ENST00000591519 JMJD7P0C870 316 aa10.38□□□□□ -0.75
VPS4B-207ENST00000591519 LIPCP11150 499 aa10.38□□□□□ -0.75
VPS4B-207ENST00000591519 TCF4P15884 667 aa10.38□□□□□ -0.75
VPS4B-207ENST00000591519 LHCGRP22888 699 aa10.38□□□□□ -0.75
VPS4B-207ENST00000591519 GPR3P46089 330 aa10.38□□□□□ -0.75
VPS4B-207ENST00000591519 ZNF75DP51815 510 aa10.38□□□□□ -0.75
VPS4B-207ENST00000591519 CDK3Q00526 305 aa10.38□□□□□ -0.75
VPS4B-207ENST00000591519 TRAF2Q12933 501 aa10.38□□□□□ -0.75
VPS4B-207ENST00000591519 PEX6Q13608 980 aa10.38□□□□□ -0.75
VPS4B-207ENST00000591519 ZNF235Q14590 738 aa10.38□□□□□ -0.75
VPS4B-207ENST00000591519 TXNRD3NBQ6F5E7 133 aa10.38□□□□□ -0.75
VPS4B-207ENST00000591519 SARM1Q6SZW1 724 aa10.38□□□□□ -0.75
VPS4B-207ENST00000591519 Q6ZVL8 140 aa10.38□□□□□ -0.75
VPS4B-207ENST00000591519 TMPRSS9Q7Z410 1059 aa10.38□□□□□ -0.75
VPS4B-207ENST00000591519 PIM3Q86V86 326 aa10.38□□□□□ -0.75
VPS4B-207ENST00000591519 HEATR4Q86WZ0 1026 aa10.38□□□□□ -0.75
VPS4B-207ENST00000591519 DTX1Q86Y01 620 aa10.38□□□□□ -0.75
VPS4B-207ENST00000591519 OR8K1Q8NGG5 319 aa10.38□□□□□ -0.75
VPS4B-207ENST00000591519 FATE1Q969F0 183 aa10.38□□□□□ -0.75
VPS4B-207ENST00000591519 SEMA4CQ9C0C4 833 aa10.38□□□□□ -0.75
VPS4B-207ENST00000591519 DEF6Q9H4E7 631 aa10.38□□□□□ -0.75
VPS4B-207ENST00000591519 CARS2Q9HA77 564 aaKnown RBP10.38□□□□□ -0.75
VPS4B-207ENST00000591519 PCDH18Q9HCL0 1135 aa10.38□□□□□ -0.75
VPS4B-207ENST00000591519 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.38□□□□□ -0.75
VPS4B-207ENST00000591519 ZNHIT6Q9NWK9 470 aaKnown RBP10.38□□□□□ -0.75
VPS4B-207ENST00000591519 TAAR2Q9P1P5 351 aa10.38□□□□□ -0.75
VPS4B-207ENST00000591519 RCOR3Q9P2K3 495 aaPredicted RBP10.38□□□□□ -0.75
VPS4B-207ENST00000591519 LOXL2Q9Y4K0 774 aa10.38□□□□□ -0.75
VPS4B-207ENST00000591519 ST14Q9Y5Y6 855 aa10.38□□□□□ -0.75
VPS4B-207ENST00000591519 A0A087X0T9 212 aa10.37□□□□□ -0.75
VPS4B-207ENST00000591519 NPIPB15A6NHN6 443 aaPredicted RBP10.37□□□□□ -0.75
VPS4B-207ENST00000591519 B4DGG1 531 aa10.37□□□□□ -0.75
VPS4B-207ENST00000591519 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.37□□□□□ -0.75
VPS4B-207ENST00000591519 ZW10O43264 779 aa10.37□□□□□ -0.75
VPS4B-207ENST00000591519 MFAP3LO75121 409 aa10.37□□□□□ -0.75
VPS4B-207ENST00000591519 FAM228BP0C875 321 aa10.37□□□□□ -0.75
VPS4B-207ENST00000591519 HGFP14210 728 aa10.37□□□□□ -0.75
VPS4B-207ENST00000591519 CES1P23141 567 aa10.37□□□□□ -0.75
VPS4B-207ENST00000591519 VARSP26640 1264 aaKnown RBP10.37□□□□□ -0.75
VPS4B-207ENST00000591519 CD1CP29017 333 aa10.37□□□□□ -0.75
VPS4B-207ENST00000591519 SERPINB6P35237 376 aa10.37□□□□□ -0.75
VPS4B-207ENST00000591519 ETV3P41162 512 aa10.37□□□□□ -0.75
VPS4B-207ENST00000591519 MMP13P45452 471 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms