RNA–Protein interactions for RNA: ENST00000590485.1

SAFB-208, Transcript of scaffold attachment factor B, human

TSL 3

Gene SAFB, Length 548 nt, Biotype retained intron, Subcellular localisation Exosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SAFB-208	ENST00000590485	BICC1	Q9H694	974 aa	Known RBP	4.65	□□□□□ -1.67
SAFB-208	ENST00000590485	MAP6D1	Q9H9H5	199 aa		4.65	□□□□□ -1.67
SAFB-208	ENST00000590485	POT1	Q9NUX5	634 aa		4.65	□□□□□ -1.67
SAFB-208	ENST00000590485	MORF4L1	Q9UBU8	362 aa		4.65	□□□□□ -1.67
SAFB-208	ENST00000590485	PLEKHB1	Q9UF11	243 aa	Predicted RBP	4.65	□□□□□ -1.67
SAFB-208	ENST00000590485	PTPRF	P10586	1907 aa		4.65	□□□□□ -1.67
SAFB-208	ENST00000590485	UTY	O14607	1347 aa		4.65	□□□□□ -1.67
SAFB-208	ENST00000590485	LY6G6E	A0A0G2JKS1	128 aa		4.64	□□□□□ -1.67
SAFB-208	ENST00000590485	IGLV5-39	A0A0G2JS06	123 aa		4.64	□□□□□ -1.67
SAFB-208	ENST00000590485	TEX13C	A0A0J9YWL9	993 aa		4.64	□□□□□ -1.67
SAFB-208	ENST00000590485	MBD3L2B	A0A1B0GVZ6	204 aa	Predicted RBP	4.64	□□□□□ -1.67
SAFB-208	ENST00000590485	SLC25A17	O43808	307 aa		4.64	□□□□□ -1.67
SAFB-208	ENST00000590485	MOSPD3	O75425	235 aa		4.64	□□□□□ -1.67
SAFB-208	ENST00000590485	MBD4	O95243	580 aa		4.64	□□□□□ -1.67
SAFB-208	ENST00000590485	F9	P00740	461 aa		4.64	□□□□□ -1.67
SAFB-208	ENST00000590485	UROD	P06132	367 aa		4.64	□□□□□ -1.67
SAFB-208	ENST00000590485	ATP1A3	P13637	1013 aa		4.64	□□□□□ -1.67
SAFB-208	ENST00000590485	COX7A2	P14406	83 aa		4.64	□□□□□ -1.67
SAFB-208	ENST00000590485	TBXAS1	P24557	533 aa	Predicted RBP	4.64	□□□□□ -1.67
SAFB-208	ENST00000590485	POU1F1	P28069	291 aa		4.64	□□□□□ -1.67
SAFB-208	ENST00000590485	CCND3	P30281	292 aa	Predicted RBP	4.64	□□□□□ -1.67
SAFB-208	ENST00000590485	MAPK4	P31152	587 aa		4.64	□□□□□ -1.67
SAFB-208	ENST00000590485	PTGER1	P34995	402 aa		4.64	□□□□□ -1.67
SAFB-208	ENST00000590485	RGS2	P41220	211 aa		4.64	□□□□□ -1.67
SAFB-208	ENST00000590485	HMGCS2	P54868	508 aa		4.64	□□□□□ -1.67
SAFB-208	ENST00000590485	IRX3	P78415	501 aa	Predicted RBP	4.64	□□□□□ -1.67
SAFB-208	ENST00000590485	PKP1	Q13835	747 aa		4.64	□□□□□ -1.67
SAFB-208	ENST00000590485	PTGR1	Q14914	329 aa		4.64	□□□□□ -1.67
SAFB-208	ENST00000590485	SHH	Q15465	462 aa		4.64	□□□□□ -1.67
SAFB-208	ENST00000590485	PRTG	Q2VWP7	1150 aa		4.64	□□□□□ -1.67
SAFB-208	ENST00000590485	ASPHD1	Q5U4P2	390 aa		4.64	□□□□□ -1.67
SAFB-208	ENST00000590485	HEPHL1	Q6MZM0	1159 aa		4.64	□□□□□ -1.67
SAFB-208	ENST00000590485	TMEM81	Q6P7N7	255 aa		4.64	□□□□□ -1.67
SAFB-208	ENST00000590485	TRIM74	Q86UV6	250 aa		4.64	□□□□□ -1.67
SAFB-208	ENST00000590485	TRIM73	Q86UV7	250 aa		4.64	□□□□□ -1.67
SAFB-208	ENST00000590485	PIM3	Q86V86	326 aa		4.64	□□□□□ -1.67
SAFB-208	ENST00000590485	FAM160B2	Q86V87	743 aa		4.64	□□□□□ -1.67
SAFB-208	ENST00000590485	NRAC	Q8N912	160 aa		4.64	□□□□□ -1.67
SAFB-208	ENST00000590485	C11orf65	Q8NCR3	313 aa		4.64	□□□□□ -1.67
SAFB-208	ENST00000590485	GPRC5A	Q8NFJ5	357 aa		4.64	□□□□□ -1.67
SAFB-208	ENST00000590485	NFKBID	Q8NI38	313 aa		4.64	□□□□□ -1.67
SAFB-208	ENST00000590485	BICD2	Q8TD16	824 aa		4.64	□□□□□ -1.67
SAFB-208	ENST00000590485	TMEM170A	Q8WVE7	144 aa		4.64	□□□□□ -1.67
SAFB-208	ENST00000590485	SLC25A28	Q96A46	364 aa		4.64	□□□□□ -1.67
SAFB-208	ENST00000590485	HMCES	Q96FZ2	354 aa		4.64	□□□□□ -1.67
SAFB-208	ENST00000590485	SLC25A18	Q9H1K4	315 aa		4.64	□□□□□ -1.67
SAFB-208	ENST00000590485	ZHX3	Q9H4I2	956 aa		4.64	□□□□□ -1.67
SAFB-208	ENST00000590485	PRKRIP1	Q9H875	184 aa	Predicted RBP	4.64	□□□□□ -1.67
SAFB-208	ENST00000590485	MPP6	Q9NZW5	540 aa		4.64	□□□□□ -1.67
SAFB-208	ENST00000590485	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	4.64	□□□□□ -1.67
SAFB-208	ENST00000590485	PCDHGB5	Q9Y5G0	923 aa		4.64	□□□□□ -1.67
SAFB-208	ENST00000590485	PHIP	Q8WWQ0	1821 aa		4.64	□□□□□ -1.67
SAFB-208	ENST00000590485	DOCK2	Q92608	1830 aa		4.64	□□□□□ -1.67
SAFB-208	ENST00000590485	GAK	O14976	1311 aa		4.64	□□□□□ -1.67
SAFB-208	ENST00000590485	SALL1	Q9NSC2	1324 aa		4.64	□□□□□ -1.67
SAFB-208	ENST00000590485	FANCI	Q9NVI1	1328 aa		4.64	□□□□□ -1.67
SAFB-208	ENST00000590485	DOCK1	Q14185	1865 aa		4.64	□□□□□ -1.67
SAFB-208	ENST00000590485	PLXNB2	O15031	1838 aa		4.63	□□□□□ -1.67
SAFB-208	ENST00000590485	PABPN1L	A6NDY0	278 aa	Known RBP	4.63	□□□□□ -1.67
SAFB-208	ENST00000590485	STMND1	H3BQB6	276 aa		4.63	□□□□□ -1.67
SAFB-208	ENST00000590485	HSPB6	O14558	160 aa		4.63	□□□□□ -1.67
SAFB-208	ENST00000590485	EPN2	O95208	641 aa		4.63	□□□□□ -1.67
SAFB-208	ENST00000590485	ENO3	P13929	434 aa	Predicted RBP	4.63	□□□□□ -1.67
SAFB-208	ENST00000590485	SLC2A4	P14672	509 aa		4.63	□□□□□ -1.67
SAFB-208	ENST00000590485	FOSL2	P15408	326 aa		4.63	□□□□□ -1.67
SAFB-208	ENST00000590485	AVPR1A	P37288	418 aa		4.63	□□□□□ -1.67
SAFB-208	ENST00000590485	CASP6	P55212	293 aa		4.63	□□□□□ -1.67
SAFB-208	ENST00000590485	UFM1	P61960	85 aa		4.63	□□□□□ -1.67
SAFB-208	ENST00000590485	MPP1	Q00013	466 aa		4.63	□□□□□ -1.67
SAFB-208	ENST00000590485	SLC18A2	Q05940	514 aa		4.63	□□□□□ -1.67
SAFB-208	ENST00000590485	RUNX2	Q13950	521 aa		4.63	□□□□□ -1.67
SAFB-208	ENST00000590485	CCL14	Q16627	93 aa		4.63	□□□□□ -1.67
SAFB-208	ENST00000590485	PRICKLE4	Q2TBC4	344 aa		4.63	□□□□□ -1.67
SAFB-208	ENST00000590485	SERTAD4-AS1	Q5TG53	156 aa		4.63	□□□□□ -1.67
SAFB-208	ENST00000590485	NUGGC	Q68CJ6	796 aa		4.63	□□□□□ -1.67
SAFB-208	ENST00000590485	FAAH2	Q6GMR7	532 aa		4.63	□□□□□ -1.67
SAFB-208	ENST00000590485	C11orf87	Q6NUJ2	197 aa		4.63	□□□□□ -1.67
SAFB-208	ENST00000590485	PARM1	Q6UWI2	310 aa		4.63	□□□□□ -1.67
SAFB-208	ENST00000590485	COLCA1	Q6ZS62	124 aa		4.63	□□□□□ -1.67
SAFB-208	ENST00000590485	MOB3C	Q70IA8	216 aa		4.63	□□□□□ -1.67
SAFB-208	ENST00000590485	MAATS1	Q7Z4T9	603 aa		4.63	□□□□□ -1.67
SAFB-208	ENST00000590485	TADA2B	Q86TJ2	420 aa		4.63	□□□□□ -1.67
SAFB-208	ENST00000590485	DZIP1	Q86YF9	867 aa	Known RBP	4.63	□□□□□ -1.67
SAFB-208	ENST00000590485	GPSM1	Q86YR5	675 aa		4.63	□□□□□ -1.67
SAFB-208	ENST00000590485	WDR63	Q8IWG1	891 aa		4.63	□□□□□ -1.67
SAFB-208	ENST00000590485	KDM1B	Q8NB78	822 aa		4.63	□□□□□ -1.67
SAFB-208	ENST00000590485	ZMIZ2	Q8NF64	920 aa		4.63	□□□□□ -1.67
SAFB-208	ENST00000590485	OR4N2	Q8NGD1	307 aa		4.63	□□□□□ -1.67
SAFB-208	ENST00000590485	RASSF8	Q8NHQ8	419 aa		4.63	□□□□□ -1.67
SAFB-208	ENST00000590485	USP6NL	Q92738	828 aa		4.63	□□□□□ -1.67
SAFB-208	ENST00000590485	KLHL29	Q96CT2	875 aa		4.63	□□□□□ -1.67
SAFB-208	ENST00000590485	SAAL1	Q96ER3	474 aa		4.63	□□□□□ -1.67
SAFB-208	ENST00000590485	ZNF778	Q96MU6	729 aa		4.63	□□□□□ -1.67
SAFB-208	ENST00000590485	C1QTNF7	Q9BXJ2	289 aa		4.63	□□□□□ -1.67
SAFB-208	ENST00000590485	PDCL3	Q9H2J4	239 aa		4.63	□□□□□ -1.67
SAFB-208	ENST00000590485	KLHL31	Q9H511	634 aa		4.63	□□□□□ -1.67
SAFB-208	ENST00000590485	WDR6	Q9NNW5	1121 aa	Known RBP	4.63	□□□□□ -1.67
SAFB-208	ENST00000590485	DDX4	Q9NQI0	724 aa	Known RBP	4.63	□□□□□ -1.67
SAFB-208	ENST00000590485	SNTG1	Q9NSN8	517 aa		4.63	□□□□□ -1.67
SAFB-208	ENST00000590485	KCND2	Q9NZV8	630 aa		4.63	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms