RNA–Protein interactions for RNA: ENST00000590407.1

PDE4A-207, Transcript of phosphodiesterase 4A, humanhuman

TSL 1 (best)

Gene PDE4A, Length 1,770 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4A-207ENST00000590407 ST3GAL5Q9UNP4 418 aa12.36□□□□□ -0.43
PDE4A-207ENST00000590407 GPR45Q9Y5Y3 372 aa12.36□□□□□ -0.43
PDE4A-207ENST00000590407 CCL15-CCL14A0A0B4J2E2 113 aa12.35□□□□□ -0.43
PDE4A-207ENST00000590407 TCRBV5S2A0A599 114 aa12.35□□□□□ -0.43
PDE4A-207ENST00000590407 MOXD2PA6NHM9 499 aa12.35□□□□□ -0.43
PDE4A-207ENST00000590407 PIP5K1BO14986 540 aa12.35□□□□□ -0.43
PDE4A-207ENST00000590407 ARPC2O15144 300 aa12.35□□□□□ -0.43
PDE4A-207ENST00000590407 ACOX3O15254 700 aa12.35□□□□□ -0.43
PDE4A-207ENST00000590407 SNAP91O60641 907 aa12.35□□□□□ -0.43
PDE4A-207ENST00000590407 NPPAP01160 153 aa12.35□□□□□ -0.43
PDE4A-207ENST00000590407 RPLP2P05387 115 aaKnown RBP12.35□□□□□ -0.43
PDE4A-207ENST00000590407 PYGLP06737 847 aa12.35□□□□□ -0.43
PDE4A-207ENST00000590407 ZNF37AP17032 561 aaPredicted RBP12.35□□□□□ -0.43
PDE4A-207ENST00000590407 HLA-DPA1P20036 260 aa12.35□□□□□ -0.43
PDE4A-207ENST00000590407 CD86P42081 329 aa12.35□□□□□ -0.43
PDE4A-207ENST00000590407 SCNN1GP51170 649 aa12.35□□□□□ -0.43
PDE4A-207ENST00000590407 AFF1P51825 1210 aaKnown RBP12.35□□□□□ -0.43
PDE4A-207ENST00000590407 SLC5A3P53794 718 aa12.35□□□□□ -0.43
PDE4A-207ENST00000590407 TSPY1Q01534 308 aa12.35□□□□□ -0.43
PDE4A-207ENST00000590407 LCP2Q13094 533 aa12.35□□□□□ -0.43
PDE4A-207ENST00000590407 PCSK7Q16549 785 aa12.35□□□□□ -0.43
PDE4A-207ENST00000590407 CCL15Q16663 113 aa12.35□□□□□ -0.43
PDE4A-207ENST00000590407 SIRPB2Q5JXA9 342 aa12.35□□□□□ -0.43
PDE4A-207ENST00000590407 MORN1Q5T089 497 aa12.35□□□□□ -0.43
PDE4A-207ENST00000590407 MRNIPQ6NTE8 343 aa12.35□□□□□ -0.43
PDE4A-207ENST00000590407 ZNF549Q6P9A3 640 aa12.35□□□□□ -0.43
PDE4A-207ENST00000590407 PRR23BQ6ZRT6 265 aa12.35□□□□□ -0.43
PDE4A-207ENST00000590407 THEM5Q8N1Q8 247 aa12.35□□□□□ -0.43
PDE4A-207ENST00000590407 OR6P1Q8NGX9 317 aa12.35□□□□□ -0.43
PDE4A-207ENST00000590407 SCAMP5Q8TAC9 235 aa12.35□□□□□ -0.43
PDE4A-207ENST00000590407 ARRDC2Q8TBH0 407 aa12.35□□□□□ -0.43
PDE4A-207ENST00000590407 FNDC8Q8TC99 324 aa12.35□□□□□ -0.43
PDE4A-207ENST00000590407 PNPT1Q8TCS8 783 aaKnown RBP12.35□□□□□ -0.43
PDE4A-207ENST00000590407 BRI3BPQ8WY22 251 aa12.35□□□□□ -0.43
PDE4A-207ENST00000590407 TMEM125Q96AQ2 219 aa12.35□□□□□ -0.43
PDE4A-207ENST00000590407 ISOC1Q96CN7 298 aa12.35□□□□□ -0.43
PDE4A-207ENST00000590407 UROC1Q96N76 676 aa12.35□□□□□ -0.43
PDE4A-207ENST00000590407 PARK7Q99497 189 aaKnown RBP12.35□□□□□ -0.43
PDE4A-207ENST00000590407 SLC39A3Q9BRY0 314 aa12.35□□□□□ -0.43
PDE4A-207ENST00000590407 TMEM9Q9P0T7 183 aa12.35□□□□□ -0.43
PDE4A-207ENST00000590407 ATP6AP2A0A1C7CYW4 349 aa12.35□□□□□ -0.43
PDE4A-207ENST00000590407 A0A1W2PP18 115 aa12.35□□□□□ -0.43
PDE4A-207ENST00000590407 SH3PXD2BA1X283 911 aa12.35□□□□□ -0.43
PDE4A-207ENST00000590407 SAC3D1A6NKF1 404 aa12.35□□□□□ -0.43
PDE4A-207ENST00000590407 MSI1O43347 362 aaKnown RBP12.35□□□□□ -0.43
PDE4A-207ENST00000590407 KERAO60938 352 aa12.35□□□□□ -0.43
PDE4A-207ENST00000590407 ATP6AP2O75787 350 aa12.35□□□□□ -0.43
PDE4A-207ENST00000590407 FGF1P05230 155 aa12.35□□□□□ -0.43
PDE4A-207ENST00000590407 PSMA3P25788 255 aa12.35□□□□□ -0.43
PDE4A-207ENST00000590407 DCKP27707 260 aa12.35□□□□□ -0.43
PDE4A-207ENST00000590407 RFC2P35250 354 aa12.35□□□□□ -0.43
PDE4A-207ENST00000590407 PLOD1Q02809 727 aaPredicted RBP12.35□□□□□ -0.43
PDE4A-207ENST00000590407 RCAN2Q14206 197 aa12.35□□□□□ -0.43
PDE4A-207ENST00000590407 TYSND1Q2T9J0 566 aa12.35□□□□□ -0.43
PDE4A-207ENST00000590407 AASDHQ4L235 1098 aaPredicted RBP12.35□□□□□ -0.43
PDE4A-207ENST00000590407 PIK3R6Q5UE93 754 aa12.35□□□□□ -0.43
PDE4A-207ENST00000590407 USP51Q70EK9 711 aa12.35□□□□□ -0.43
PDE4A-207ENST00000590407 PATL1Q86TB9 770 aaKnown RBP12.35□□□□□ -0.43
PDE4A-207ENST00000590407 LRRTM3Q86VH5 581 aa12.35□□□□□ -0.43
PDE4A-207ENST00000590407 CMTR2Q8IYT2 770 aaKnown RBP12.35□□□□□ -0.43
PDE4A-207ENST00000590407 OR10T2Q8NGX3 314 aa12.35□□□□□ -0.43
PDE4A-207ENST00000590407 GRIN3AQ8TCU5 1115 aa12.35□□□□□ -0.43
PDE4A-207ENST00000590407 PPP1R13LQ8WUF5 828 aa12.35□□□□□ -0.43
PDE4A-207ENST00000590407 KIAA1191Q96A73 305 aa12.35□□□□□ -0.43
PDE4A-207ENST00000590407 HMCESQ96FZ2 354 aa12.35□□□□□ -0.43
PDE4A-207ENST00000590407 SUSD3Q96L08 255 aa12.35□□□□□ -0.43
PDE4A-207ENST00000590407 TUBA1CQ9BQE3 449 aa12.35□□□□□ -0.43
PDE4A-207ENST00000590407 AARSD1Q9BTE6 412 aaKnown RBP12.35□□□□□ -0.43
PDE4A-207ENST00000590407 BRINP2Q9C0B6 783 aa12.35□□□□□ -0.43
PDE4A-207ENST00000590407 ZYG11BQ9C0D3 744 aa12.35□□□□□ -0.43
PDE4A-207ENST00000590407 DERL2Q9GZP9 239 aa12.35□□□□□ -0.43
PDE4A-207ENST00000590407 AP5M1Q9H0R1 490 aa12.35□□□□□ -0.43
PDE4A-207ENST00000590407 TUBB1Q9H4B7 451 aa12.35□□□□□ -0.43
PDE4A-207ENST00000590407 MID1IP1Q9NPA3 183 aa12.35□□□□□ -0.43
PDE4A-207ENST00000590407 PFDN4Q9NQP4 134 aa12.35□□□□□ -0.43
PDE4A-207ENST00000590407 INTS10Q9NVR2 710 aaKnown RBP12.35□□□□□ -0.43
PDE4A-207ENST00000590407 MPP6Q9NZW5 540 aa12.35□□□□□ -0.43
PDE4A-207ENST00000590407 SFMBT1Q9UHJ3 866 aa12.35□□□□□ -0.43
PDE4A-207ENST00000590407 POLG2Q9UHN1 485 aa12.35□□□□□ -0.43
PDE4A-207ENST00000590407 DOCK4Q8N1I0 1966 aa12.34□□□□□ -0.43
PDE4A-207ENST00000590407 CASTOR2A6NHX0 329 aa12.34□□□□□ -0.43
PDE4A-207ENST00000590407 H0YAE9 185 aa12.34□□□□□ -0.43
PDE4A-207ENST00000590407 STX16O14662 325 aa12.34□□□□□ -0.43
PDE4A-207ENST00000590407 KPNA6O60684 536 aa12.34□□□□□ -0.43
PDE4A-207ENST00000590407 PFDN1O60925 122 aa12.34□□□□□ -0.43
PDE4A-207ENST00000590407 EEDO75530 441 aaKnown RBP12.34□□□□□ -0.43
PDE4A-207ENST00000590407 RPP40O75818 363 aaKnown RBP12.34□□□□□ -0.43
PDE4A-207ENST00000590407 GLP2RO95838 553 aa12.34□□□□□ -0.43
PDE4A-207ENST00000590407 HTR1EP28566 365 aa12.34□□□□□ -0.43
PDE4A-207ENST00000590407 CAPGP40121 348 aa12.34□□□□□ -0.43
PDE4A-207ENST00000590407 DSC2Q02487 901 aa12.34□□□□□ -0.43
PDE4A-207ENST00000590407 IL10RBQ08334 325 aa12.34□□□□□ -0.43
PDE4A-207ENST00000590407 SLC10A7Q0GE19 358 aa12.34□□□□□ -0.43
PDE4A-207ENST00000590407 GRSF1Q12849 480 aaKnown RBP eCLIP12.34□□□□□ -0.43
PDE4A-207ENST00000590407 MAP2K5Q13163 448 aa12.34□□□□□ -0.43
PDE4A-207ENST00000590407 GRB7Q14451 532 aa12.34□□□□□ -0.43
PDE4A-207ENST00000590407 IHHQ14623 411 aa12.34□□□□□ -0.43
PDE4A-207ENST00000590407 OR4D1Q15615 310 aa12.34□□□□□ -0.43
PDE4A-207ENST00000590407 VPS26BQ4G0F5 336 aa12.34□□□□□ -0.43
PDE4A-207ENST00000590407 PDCD4Q53EL6 469 aaKnown RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms