RNA–Protein interactions for RNA: ENST00000589445.1

R3HDM4-205, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 705 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-205ENST00000589445 HMGCLP35914 325 aa22.37■■□□□ 1.17
R3HDM4-205ENST00000589445 MAGEA6P43360 314 aa22.37■■□□□ 1.17
R3HDM4-205ENST00000589445 GPR1P46091 355 aa22.37■■□□□ 1.17
R3HDM4-205ENST00000589445 RABIFP47224 123 aa22.37■■□□□ 1.17
R3HDM4-205ENST00000589445 THOP1P52888 689 aa22.37■■□□□ 1.17
R3HDM4-205ENST00000589445 TMPRSS15P98073 1019 aa22.37■■□□□ 1.17
R3HDM4-205ENST00000589445 INPP5AQ14642 412 aa22.37■■□□□ 1.17
R3HDM4-205ENST00000589445 PTPRCAPQ14761 206 aa22.37■■□□□ 1.17
R3HDM4-205ENST00000589445 RNASEH2BQ5TBB1 312 aaKnown RBP22.37■■□□□ 1.17
R3HDM4-205ENST00000589445 Q6ZSR6 202 aa22.37■■□□□ 1.17
R3HDM4-205ENST00000589445 ZNF534Q76KX8 674 aa22.37■■□□□ 1.17
R3HDM4-205ENST00000589445 ZNF765Q7L2R6 523 aa22.37■■□□□ 1.17
R3HDM4-205ENST00000589445 PELI3Q8N2H9 469 aa22.37■■□□□ 1.17
R3HDM4-205ENST00000589445 PPHLN1Q8NEY8 458 aaKnown RBP22.37■■□□□ 1.17
R3HDM4-205ENST00000589445 BRSK1Q8TDC3 778 aa22.37■■□□□ 1.17
R3HDM4-205ENST00000589445 GTPBP2Q9BX10 602 aaKnown RBP22.37■■□□□ 1.17
R3HDM4-205ENST00000589445 CARD6Q9BX69 1037 aa22.37■■□□□ 1.17
R3HDM4-205ENST00000589445 SPATA16Q9BXB7 569 aa22.37■■□□□ 1.17
R3HDM4-205ENST00000589445 FAM83DQ9H4H8 585 aa22.37■■□□□ 1.17
R3HDM4-205ENST00000589445 PARD6AQ9NPB6 346 aa22.37■■□□□ 1.17
R3HDM4-205ENST00000589445 RAD18Q9NS91 495 aa22.37■■□□□ 1.17
R3HDM4-205ENST00000589445 KCTD3Q9Y597 815 aa22.37■■□□□ 1.17
R3HDM4-205ENST00000589445 LAMA1P25391 3075 aa22.36■■□□□ 1.17
R3HDM4-205ENST00000589445 VILLO15195 856 aa22.36■■□□□ 1.17
R3HDM4-205ENST00000589445 TSHRP16473 764 aa22.36■■□□□ 1.17
R3HDM4-205ENST00000589445 SPAM1P38567 509 aa22.36■■□□□ 1.17
R3HDM4-205ENST00000589445 ZNF140P52738 457 aaPredicted RBP22.36■■□□□ 1.17
R3HDM4-205ENST00000589445 DCDC1P59894 354 aa22.36■■□□□ 1.17
R3HDM4-205ENST00000589445 CRADDP78560 199 aa22.36■■□□□ 1.17
R3HDM4-205ENST00000589445 PDE1BQ01064 536 aa22.36■■□□□ 1.17
R3HDM4-205ENST00000589445 PDE1CQ14123 709 aaPredicted RBP22.36■■□□□ 1.17
R3HDM4-205ENST00000589445 SLC23A3Q6PIS1 610 aa22.36■■□□□ 1.17
R3HDM4-205ENST00000589445 FAM151BQ6UXP7 276 aa22.36■■□□□ 1.17
R3HDM4-205ENST00000589445 PCGF5Q86SE9 256 aa22.36■■□□□ 1.17
R3HDM4-205ENST00000589445 HEATR4Q86WZ0 1026 aa22.36■■□□□ 1.17
R3HDM4-205ENST00000589445 CBARPQ8N350 705 aaPredicted RBP22.36■■□□□ 1.17
R3HDM4-205ENST00000589445 CEP112Q8N8E3 955 aa22.36■■□□□ 1.17
R3HDM4-205ENST00000589445 NAT8LQ8N9F0 302 aa22.36■■□□□ 1.17
R3HDM4-205ENST00000589445 GPR26Q8NDV2 337 aa22.36■■□□□ 1.17
R3HDM4-205ENST00000589445 OR4K2Q8NGD2 314 aa22.36■■□□□ 1.17
R3HDM4-205ENST00000589445 BMFQ96LC9 184 aa22.36■■□□□ 1.17
R3HDM4-205ENST00000589445 CAPN10Q9HC96 672 aa22.36■■□□□ 1.17
R3HDM4-205ENST00000589445 ANKRD6Q9Y2G4 727 aa22.36■■□□□ 1.17
R3HDM4-205ENST00000589445 HS3ST3A1Q9Y663 406 aa22.36■■□□□ 1.17
R3HDM4-205ENST00000589445 CACNA1EQ15878 2313 aa22.36■■□□□ 1.17
R3HDM4-205ENST00000589445 PLXNB3Q9ULL4 1909 aa22.35■■□□□ 1.17
R3HDM4-205ENST00000589445 BPTFQ12830 3046 aa22.35■■□□□ 1.17
R3HDM4-205ENST00000589445 LNP1A1A4G5 178 aa22.35■■□□□ 1.17
R3HDM4-205ENST00000589445 AP3B1O00203 1094 aa22.35■■□□□ 1.17
R3HDM4-205ENST00000589445 TLR4O00206 839 aa22.35■■□□□ 1.17
R3HDM4-205ENST00000589445 CCL22O00626 93 aa22.35■■□□□ 1.17
R3HDM4-205ENST00000589445 INPP4BO15327 924 aa22.35■■□□□ 1.17
R3HDM4-205ENST00000589445 MAGEC1O60732 1142 aa22.35■■□□□ 1.17
R3HDM4-205ENST00000589445 LRP3O75074 770 aa22.35■■□□□ 1.17
R3HDM4-205ENST00000589445 KRT37O76014 449 aa22.35■■□□□ 1.17
R3HDM4-205ENST00000589445 MGAT1P26572 445 aa22.35■■□□□ 1.17
R3HDM4-205ENST00000589445 RPL21P46778 160 aaKnown RBP22.35■■□□□ 1.17
R3HDM4-205ENST00000589445 ATXN3P54252 364 aaPredicted RBP22.35■■□□□ 1.17
R3HDM4-205ENST00000589445 IRX4P78413 519 aa22.35■■□□□ 1.17
R3HDM4-205ENST00000589445 CSRP2Q16527 193 aa22.35■■□□□ 1.17
R3HDM4-205ENST00000589445 AASDHQ4L235 1098 aaPredicted RBP22.35■■□□□ 1.17
R3HDM4-205ENST00000589445 PNCKQ6P2M8 343 aa22.35■■□□□ 1.17
R3HDM4-205ENST00000589445 LRRC8BQ6P9F7 803 aa22.35■■□□□ 1.17
R3HDM4-205ENST00000589445 IQCHQ86VS3 1027 aa22.35■■□□□ 1.17
R3HDM4-205ENST00000589445 SLC22A18ASQ8N1D0 253 aa22.35■■□□□ 1.17
R3HDM4-205ENST00000589445 NOA1Q8NC60 698 aaKnown RBP22.35■■□□□ 1.17
R3HDM4-205ENST00000589445 OR13C4Q8NGS5 318 aa22.35■■□□□ 1.17
R3HDM4-205ENST00000589445 DNAJC1Q96KC8 554 aaKnown RBP22.35■■□□□ 1.17
R3HDM4-205ENST00000589445 EDEM2Q9BV94 578 aa22.35■■□□□ 1.17
R3HDM4-205ENST00000589445 RAB17Q9H0T7 212 aa22.35■■□□□ 1.17
R3HDM4-205ENST00000589445 XAB2Q9HCS7 855 aaKnown RBP22.35■■□□□ 1.17
R3HDM4-205ENST00000589445 GDF3Q9NR23 364 aa22.35■■□□□ 1.17
R3HDM4-205ENST00000589445 SYBUQ9NX95 663 aa22.35■■□□□ 1.17
R3HDM4-205ENST00000589445 IL17CQ9P0M4 197 aa22.35■■□□□ 1.17
R3HDM4-205ENST00000589445 FKBPLQ9UIM3 349 aa22.35■■□□□ 1.17
R3HDM4-205ENST00000589445 SNX24Q9Y343 169 aa22.35■■□□□ 1.17
R3HDM4-205ENST00000589445 UTP11Q9Y3A2 253 aaKnown RBP22.35■■□□□ 1.17
R3HDM4-205ENST00000589445 SNX11Q9Y5W9 270 aa22.35■■□□□ 1.17
R3HDM4-205ENST00000589445 HEATR9A2RTY3 570 aa22.34■■□□□ 1.17
R3HDM4-205ENST00000589445 RGSL1A5PLK6 1076 aa22.34■■□□□ 1.17
R3HDM4-205ENST00000589445 CACNB4O00305 520 aaPredicted RBP22.34■■□□□ 1.17
R3HDM4-205ENST00000589445 LDB2O43679 373 aa22.34■■□□□ 1.17
R3HDM4-205ENST00000589445 SYPP08247 313 aa22.34■■□□□ 1.17
R3HDM4-205ENST00000589445 ZNF806P0C7X5 589 aa22.34■■□□□ 1.17
R3HDM4-205ENST00000589445 ENGP17813 658 aa22.34■■□□□ 1.17
R3HDM4-205ENST00000589445 ITGA8P53708 1063 aa22.34■■□□□ 1.17
R3HDM4-205ENST00000589445 NXPH1P58417 271 aa22.34■■□□□ 1.17
R3HDM4-205ENST00000589445 PFN3P60673 137 aa22.34■■□□□ 1.17
R3HDM4-205ENST00000589445 OVGP1Q12889 678 aa22.34■■□□□ 1.17
R3HDM4-205ENST00000589445 KIF19Q2TAC6 998 aa22.34■■□□□ 1.17
R3HDM4-205ENST00000589445 HENMT1Q5T8I9 393 aaKnown RBP22.34■■□□□ 1.17
R3HDM4-205ENST00000589445 CASC4Q6P4E1 433 aa22.34■■□□□ 1.17
R3HDM4-205ENST00000589445 PRR23CQ6ZRP0 262 aa22.34■■□□□ 1.17
R3HDM4-205ENST00000589445 TRIM74Q86UV6 250 aa22.34■■□□□ 1.17
R3HDM4-205ENST00000589445 FAM174AQ8TBP5 190 aa22.34■■□□□ 1.17
R3HDM4-205ENST00000589445 SERPINB12Q96P63 405 aa22.34■■□□□ 1.17
R3HDM4-205ENST00000589445 PLEKHG4BQ96PX9 1271 aa22.34■■□□□ 1.17
R3HDM4-205ENST00000589445 AGAP2Q99490 1192 aa22.34■■□□□ 1.17
R3HDM4-205ENST00000589445 APOOQ9BUR5 198 aa22.34■■□□□ 1.17
R3HDM4-205ENST00000589445 PHPT1Q9NRX4 125 aaPredicted RBP22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms