RNA–Protein interactions for RNA: ENST00000588917.2

CIRBP-220, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-220ENST00000588917 WHRNQ9P202 907 aa19.52■□□□□ 0.72
CIRBP-220ENST00000588917 NFKBIL1Q9UBC1 381 aaPredicted RBP19.52■□□□□ 0.72
CIRBP-220ENST00000588917 ANAPC5Q9UJX4 755 aa19.52■□□□□ 0.72
CIRBP-220ENST00000588917 RIMKLBQ9ULI2 386 aa19.52■□□□□ 0.72
CIRBP-220ENST00000588917 THADAQ6YHU6 1953 aa19.52■□□□□ 0.71
CIRBP-220ENST00000588917 A0A0U1RQS6 177 aa19.51■□□□□ 0.71
CIRBP-220ENST00000588917 TCRBV7S3A2A0A539 114 aa19.51■□□□□ 0.71
CIRBP-220ENST00000588917 KHNYNO15037 678 aaKnown RBP19.51■□□□□ 0.71
CIRBP-220ENST00000588917 RAD51BO15315 384 aa19.51■□□□□ 0.71
CIRBP-220ENST00000588917 SYPP08247 313 aa19.51■□□□□ 0.71
CIRBP-220ENST00000588917 HOXC4P09017 264 aaPredicted RBP19.51■□□□□ 0.71
CIRBP-220ENST00000588917 ZNF806P0C7X5 589 aa19.51■□□□□ 0.71
CIRBP-220ENST00000588917 GM2AP17900 193 aa19.51■□□□□ 0.71
CIRBP-220ENST00000588917 TUBB4BP68371 445 aa19.51■□□□□ 0.71
CIRBP-220ENST00000588917 CAV1Q03135 178 aa19.51■□□□□ 0.71
CIRBP-220ENST00000588917 PTK2BQ14289 1009 aa19.51■□□□□ 0.71
CIRBP-220ENST00000588917 INPP5AQ14642 412 aa19.51■□□□□ 0.71
CIRBP-220ENST00000588917 PCID2Q5JVF3 399 aa19.51■□□□□ 0.71
CIRBP-220ENST00000588917 PLA2G2CQ5R387 149 aa19.51■□□□□ 0.71
CIRBP-220ENST00000588917 PDPK2PQ6A1A2 396 aa19.51■□□□□ 0.71
CIRBP-220ENST00000588917 KYAT3Q6YP21 454 aaKnown RBP19.51■□□□□ 0.71
CIRBP-220ENST00000588917 PPHLN1Q8NEY8 458 aaKnown RBP19.51■□□□□ 0.71
CIRBP-220ENST00000588917 PTCD2Q8WV60 388 aaKnown RBP19.51■□□□□ 0.71
CIRBP-220ENST00000588917 PEX13Q92968 403 aa19.51■□□□□ 0.71
CIRBP-220ENST00000588917 EID2BQ96D98 161 aa19.51■□□□□ 0.71
CIRBP-220ENST00000588917 BMFQ96LC9 184 aa19.51■□□□□ 0.71
CIRBP-220ENST00000588917 LRRC1Q9BTT6 524 aa19.51■□□□□ 0.71
CIRBP-220ENST00000588917 ZSCAN5AQ9BUG6 496 aa19.51■□□□□ 0.71
CIRBP-220ENST00000588917 TRIM31Q9BZY9 425 aa19.51■□□□□ 0.71
CIRBP-220ENST00000588917 ZDHHC5Q9C0B5 715 aa19.51■□□□□ 0.71
CIRBP-220ENST00000588917 FZD3Q9NPG1 666 aa19.51■□□□□ 0.71
CIRBP-220ENST00000588917 MBNL1Q9NR56 388 aaKnown RBP19.51■□□□□ 0.71
CIRBP-220ENST00000588917 APPL1Q9UKG1 709 aa19.51■□□□□ 0.71
CIRBP-220ENST00000588917 ARL5AQ9Y689 179 aa19.51■□□□□ 0.71
CIRBP-220ENST00000588917 SPTBN2O15020 2390 aa19.5■□□□□ 0.71
CIRBP-220ENST00000588917 A0A1W2PR77 199 aa19.5■□□□□ 0.71
CIRBP-220ENST00000588917 SDR42E2A6NKP2 422 aa19.5■□□□□ 0.71
CIRBP-220ENST00000588917 GOLGA8CPA6NN73 597 aa19.5■□□□□ 0.71
CIRBP-220ENST00000588917 TLR4O00206 839 aa19.5■□□□□ 0.71
CIRBP-220ENST00000588917 LDB2O43679 373 aa19.5■□□□□ 0.71
CIRBP-220ENST00000588917 SEC31AO94979 1220 aaKnown RBP19.5■□□□□ 0.71
CIRBP-220ENST00000588917 SLC4A1P02730 911 aa19.5■□□□□ 0.71
CIRBP-220ENST00000588917 CFIP05156 583 aa19.5■□□□□ 0.71
CIRBP-220ENST00000588917 TRIM23P36406 574 aa19.5■□□□□ 0.71
CIRBP-220ENST00000588917 GPR1P46091 355 aa19.5■□□□□ 0.71
CIRBP-220ENST00000588917 SESN2P58004 480 aaPredicted RBP19.5■□□□□ 0.71
CIRBP-220ENST00000588917 PFN3P60673 137 aa19.5■□□□□ 0.71
CIRBP-220ENST00000588917 IRF4Q15306 451 aa19.5■□□□□ 0.71
CIRBP-220ENST00000588917 TRIM61Q5EBN2 209 aa19.5■□□□□ 0.71
CIRBP-220ENST00000588917 CERCAMQ5T4B2 595 aa19.5■□□□□ 0.71
CIRBP-220ENST00000588917 ANKRD22Q5VYY1 191 aa19.5■□□□□ 0.71
CIRBP-220ENST00000588917 DUPD1Q68J44 220 aa19.5■□□□□ 0.71
CIRBP-220ENST00000588917 HIBCHQ6NVY1 386 aaPredicted RBP19.5■□□□□ 0.71
CIRBP-220ENST00000588917 Q6ZSR6 202 aa19.5■□□□□ 0.71
CIRBP-220ENST00000588917 OR4K2Q8NGD2 314 aa19.5■□□□□ 0.71
CIRBP-220ENST00000588917 MYOCQ99972 504 aa19.5■□□□□ 0.71
CIRBP-220ENST00000588917 APOOQ9BUR5 198 aa19.5■□□□□ 0.71
CIRBP-220ENST00000588917 PIH1D1Q9NWS0 290 aaKnown RBP19.5■□□□□ 0.71
CIRBP-220ENST00000588917 SNX24Q9Y343 169 aa19.5■□□□□ 0.71
CIRBP-220ENST00000588917 ATXN2Q99700 1313 aaKnown RBP19.5■□□□□ 0.71
CIRBP-220ENST00000588917 ABCA7Q8IZY2 2146 aa19.49■□□□□ 0.71
CIRBP-220ENST00000588917 DCDC2BA2VCK2 349 aa19.49■□□□□ 0.71
CIRBP-220ENST00000588917 POM121BA6NF01 834 aa19.49■□□□□ 0.71
CIRBP-220ENST00000588917 MROH6A6NGR9 719 aa19.49■□□□□ 0.71
CIRBP-220ENST00000588917 PCCBP05166 539 aa19.49■□□□□ 0.71
CIRBP-220ENST00000588917 THEGLP0DJG4 465 aa19.49■□□□□ 0.71
CIRBP-220ENST00000588917 BPIP17213 487 aa19.49■□□□□ 0.71
CIRBP-220ENST00000588917 KELP23276 732 aa19.49■□□□□ 0.71
CIRBP-220ENST00000588917 HTR1BP28222 390 aa19.49■□□□□ 0.71
CIRBP-220ENST00000588917 SPAM1P38567 509 aa19.49■□□□□ 0.71
CIRBP-220ENST00000588917 RPL21P46778 160 aaKnown RBP19.49■□□□□ 0.71
CIRBP-220ENST00000588917 CSNK1EP49674 416 aaKnown RBP19.49■□□□□ 0.71
CIRBP-220ENST00000588917 THOP1P52888 689 aa19.49■□□□□ 0.71
CIRBP-220ENST00000588917 ITGA8P53708 1063 aa19.49■□□□□ 0.71
CIRBP-220ENST00000588917 CLDN2P57739 230 aa19.49■□□□□ 0.71
CIRBP-220ENST00000588917 SEPT6Q14141 434 aa19.49■□□□□ 0.71
CIRBP-220ENST00000588917 KCTD19Q17RG1 926 aaPredicted RBP19.49■□□□□ 0.71
CIRBP-220ENST00000588917 HENMT1Q5T8I9 393 aaKnown RBP19.49■□□□□ 0.71
CIRBP-220ENST00000588917 RAET1GQ6H3X3 334 aa19.49■□□□□ 0.71
CIRBP-220ENST00000588917 IL27RAQ6UWB1 636 aa19.49■□□□□ 0.71
CIRBP-220ENST00000588917 GCNT7Q6ZNI0 430 aa19.49■□□□□ 0.71
CIRBP-220ENST00000588917 CAND1Q86VP6 1230 aaKnown RBP19.49■□□□□ 0.71
CIRBP-220ENST00000588917 PDIK1LQ8N165 341 aa19.49■□□□□ 0.71
CIRBP-220ENST00000588917 TRAM1L1Q8N609 369 aa19.49■□□□□ 0.71
CIRBP-220ENST00000588917 GPR26Q8NDV2 337 aa19.49■□□□□ 0.71
CIRBP-220ENST00000588917 SCAMP4Q969E2 229 aa19.49■□□□□ 0.71
CIRBP-220ENST00000588917 SERPINB12Q96P63 405 aa19.49■□□□□ 0.71
CIRBP-220ENST00000588917 RIOK2Q9BVS4 552 aaKnown RBP19.49■□□□□ 0.71
CIRBP-220ENST00000588917 BPIFA1Q9NP55 256 aa19.49■□□□□ 0.71
CIRBP-220ENST00000588917 SEMA4GQ9NTN9 838 aa19.49■□□□□ 0.71
CIRBP-220ENST00000588917 NLE1Q9NVX2 485 aaPredicted RBP19.49■□□□□ 0.71
CIRBP-220ENST00000588917 SAMD15Q9P1V8 674 aa19.49■□□□□ 0.71
CIRBP-220ENST00000588917 CD84Q9UIB8 345 aa19.49■□□□□ 0.71
CIRBP-220ENST00000588917 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.49■□□□□ 0.71
CIRBP-220ENST00000588917 NUMA1Q14980 2115 aa19.48■□□□□ 0.71
CIRBP-220ENST00000588917 GOLGA8MH3BSY2 632 aa19.48■□□□□ 0.71
CIRBP-220ENST00000588917 CACNB4O00305 520 aaPredicted RBP19.48■□□□□ 0.71
CIRBP-220ENST00000588917 DFNA5O60443 496 aa19.48■□□□□ 0.71
CIRBP-220ENST00000588917 TMEM63AO94886 807 aa19.48■□□□□ 0.71
CIRBP-220ENST00000588917 IGFALSP35858 605 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms