RNA–Protein interactions for RNA: ENST00000588885.1

RFX1-204, Transcript of regulatory factor X1, humanhuman

TSL 3

Gene RFX1, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-204ENST00000588885 GPR34Q9UPC5 381 aa11.55□□□□□ -0.56
RFX1-204ENST00000588885 PCDHB1Q9Y5F3 818 aa11.55□□□□□ -0.56
RFX1-204ENST00000588885 PCDHA3Q9Y5H8 950 aa11.55□□□□□ -0.56
RFX1-204ENST00000588885 SAR1BQ9Y6B6 198 aa11.55□□□□□ -0.56
RFX1-204ENST00000588885 ITPR1Q14643 2758 aa11.55□□□□□ -0.56
RFX1-204ENST00000588885 ANKRD36A6QL64 1941 aa11.54□□□□□ -0.56
RFX1-204ENST00000588885 TPP1O14773 563 aa11.54□□□□□ -0.56
RFX1-204ENST00000588885 APOL1O14791 398 aa11.54□□□□□ -0.56
RFX1-204ENST00000588885 TGM2P21980 687 aa11.54□□□□□ -0.56
RFX1-204ENST00000588885 CD86P42081 329 aa11.54□□□□□ -0.56
RFX1-204ENST00000588885 POLD2P49005 469 aa11.54□□□□□ -0.56
RFX1-204ENST00000588885 RWDD2BP57060 319 aa11.54□□□□□ -0.56
RFX1-204ENST00000588885 COL9A2Q14055 689 aaPredicted RBP11.54□□□□□ -0.56
RFX1-204ENST00000588885 RALGPS1Q5JS13 557 aa11.54□□□□□ -0.56
RFX1-204ENST00000588885 C6orf132Q5T0Z8 1188 aa11.54□□□□□ -0.56
RFX1-204ENST00000588885 SEL1L2Q5TEA6 688 aa11.54□□□□□ -0.56
RFX1-204ENST00000588885 LRRC38Q5VT99 294 aa11.54□□□□□ -0.56
RFX1-204ENST00000588885 KAZNQ674X7 775 aa11.54□□□□□ -0.56
RFX1-204ENST00000588885 ESRP1Q6NXG1 681 aaKnown RBP11.54□□□□□ -0.56
RFX1-204ENST00000588885 DOK6Q6PKX4 331 aa11.54□□□□□ -0.56
RFX1-204ENST00000588885 MFSD7Q6UXD7 560 aa11.54□□□□□ -0.56
RFX1-204ENST00000588885 USP45Q70EL2 814 aa11.54□□□□□ -0.56
RFX1-204ENST00000588885 TAF8Q7Z7C8 310 aa11.54□□□□□ -0.56
RFX1-204ENST00000588885 PDZD3Q86UT5 571 aa11.54□□□□□ -0.56
RFX1-204ENST00000588885 SFTPA2Q8IWL1 248 aa11.54□□□□□ -0.56
RFX1-204ENST00000588885 KATNAL2Q8IYT4 538 aa11.54□□□□□ -0.56
RFX1-204ENST00000588885 CBARPQ8N350 705 aaPredicted RBP11.54□□□□□ -0.56
RFX1-204ENST00000588885 FSTL5Q8N475 847 aaPredicted RBP11.54□□□□□ -0.56
RFX1-204ENST00000588885 DCBLD1Q8N8Z6 715 aa11.54□□□□□ -0.56
RFX1-204ENST00000588885 KYQ8NBH2 561 aa11.54□□□□□ -0.56
RFX1-204ENST00000588885 LPCAT1Q8NF37 534 aa11.54□□□□□ -0.56
RFX1-204ENST00000588885 ATL2Q8NHH9 583 aa11.54□□□□□ -0.56
RFX1-204ENST00000588885 ARRDC2Q8TBH0 407 aa11.54□□□□□ -0.56
RFX1-204ENST00000588885 SCG3Q8WXD2 468 aaKnown RBP11.54□□□□□ -0.56
RFX1-204ENST00000588885 GLMNQ92990 594 aa11.54□□□□□ -0.56
RFX1-204ENST00000588885 MS4A14Q96JA4 679 aa11.54□□□□□ -0.56
RFX1-204ENST00000588885 BOCQ9BWV1 1114 aa11.54□□□□□ -0.56
RFX1-204ENST00000588885 TMEM168Q9H0V1 697 aa11.54□□□□□ -0.56
RFX1-204ENST00000588885 CARD9Q9H257 536 aa11.54□□□□□ -0.56
RFX1-204ENST00000588885 USP29Q9HBJ7 922 aa11.54□□□□□ -0.56
RFX1-204ENST00000588885 EVA1BQ9NVM1 165 aa11.54□□□□□ -0.56
RFX1-204ENST00000588885 SAE1Q9UBE0 346 aaPredicted RBP11.54□□□□□ -0.56
RFX1-204ENST00000588885 CDC23Q9UJX2 597 aa11.54□□□□□ -0.56
RFX1-204ENST00000588885 PADI4Q9UM07 663 aa11.54□□□□□ -0.56
RFX1-204ENST00000588885 GPSM3Q9Y4H4 160 aa11.54□□□□□ -0.56
RFX1-204ENST00000588885 EME2A4GXA9 379 aaPredicted RBP11.53□□□□□ -0.56
RFX1-204ENST00000588885 CEP104O60308 925 aa11.53□□□□□ -0.56
RFX1-204ENST00000588885 FZD6O60353 706 aa11.53□□□□□ -0.56
RFX1-204ENST00000588885 CSO75390 466 aaKnown RBP11.53□□□□□ -0.56
RFX1-204ENST00000588885 PRLP01236 227 aa11.53□□□□□ -0.56
RFX1-204ENST00000588885 GP1BAP07359 652 aa11.53□□□□□ -0.56
RFX1-204ENST00000588885 PYGMP11217 842 aa11.53□□□□□ -0.56
RFX1-204ENST00000588885 KRT10P13645 584 aa11.53□□□□□ -0.56
RFX1-204ENST00000588885 CES1P23141 567 aa11.53□□□□□ -0.56
RFX1-204ENST00000588885 NFKBIAP25963 317 aa11.53□□□□□ -0.56
RFX1-204ENST00000588885 TRIM23P36406 574 aa11.53□□□□□ -0.56
RFX1-204ENST00000588885 RPIAP49247 311 aa11.53□□□□□ -0.56
RFX1-204ENST00000588885 KIAA1024LP59773 190 aa11.53□□□□□ -0.56
RFX1-204ENST00000588885 PTSQ03393 145 aa11.53□□□□□ -0.56
RFX1-204ENST00000588885 ZBTB17Q13105 803 aa11.53□□□□□ -0.56
RFX1-204ENST00000588885 PDK1Q15118 436 aa11.53□□□□□ -0.56
RFX1-204ENST00000588885 LRRC66Q68CR7 880 aa11.53□□□□□ -0.56
RFX1-204ENST00000588885 SLC9A4Q6AI14 798 aa11.53□□□□□ -0.56
RFX1-204ENST00000588885 RAET1GQ6H3X3 334 aa11.53□□□□□ -0.56
RFX1-204ENST00000588885 LRRC69Q6ZNQ3 347 aa11.53□□□□□ -0.56
RFX1-204ENST00000588885 HEATR4Q86WZ0 1026 aa11.53□□□□□ -0.56
RFX1-204ENST00000588885 GKN2Q86XP6 184 aa11.53□□□□□ -0.56
RFX1-204ENST00000588885 NDUFAF2Q8N183 169 aa11.53□□□□□ -0.56
RFX1-204ENST00000588885 CNTD1Q8N815 330 aa11.53□□□□□ -0.56
RFX1-204ENST00000588885 FAM46DQ8NEK8 389 aa11.53□□□□□ -0.56
RFX1-204ENST00000588885 CCL4L1Q8NHW4 92 aa11.53□□□□□ -0.56
RFX1-204ENST00000588885 PTCD2Q8WV60 388 aaKnown RBP11.53□□□□□ -0.56
RFX1-204ENST00000588885 SPOCK2Q92563 424 aa11.53□□□□□ -0.56
RFX1-204ENST00000588885 SCAMP4Q969E2 229 aa11.53□□□□□ -0.56
RFX1-204ENST00000588885 DTD2Q96FN9 168 aa11.53□□□□□ -0.56
RFX1-204ENST00000588885 AGAP3Q96P47 875 aa11.53□□□□□ -0.56
RFX1-204ENST00000588885 MCCC1Q96RQ3 725 aaPredicted RBP11.53□□□□□ -0.56
RFX1-204ENST00000588885 HERPUD2Q9BSE4 406 aa11.53□□□□□ -0.56
RFX1-204ENST00000588885 TDRD1Q9BXT4 1180 aaKnown RBP11.53□□□□□ -0.56
RFX1-204ENST00000588885 ABCG8Q9H221 673 aa11.53□□□□□ -0.56
RFX1-204ENST00000588885 L2HGDHQ9H9P8 463 aa11.53□□□□□ -0.56
RFX1-204ENST00000588885 CARS2Q9HA77 564 aaKnown RBP11.53□□□□□ -0.56
RFX1-204ENST00000588885 PCDH9Q9HC56 1237 aa11.53□□□□□ -0.56
RFX1-204ENST00000588885 PHPT1Q9NRX4 125 aaPredicted RBP11.53□□□□□ -0.56
RFX1-204ENST00000588885 DDX56Q9NY93 547 aaKnown RBP11.53□□□□□ -0.56
RFX1-204ENST00000588885 NCKIPSDQ9NZQ3 722 aa11.53□□□□□ -0.56
RFX1-204ENST00000588885 TMEM98Q9Y2Y6 226 aa11.53□□□□□ -0.56
RFX1-204ENST00000588885 A0A0J9YYE9 177 aa11.52□□□□□ -0.57
RFX1-204ENST00000588885 B4DGG1 531 aa11.52□□□□□ -0.57
RFX1-204ENST00000588885 PDE2AO00408 941 aaPredicted RBP11.52□□□□□ -0.57
RFX1-204ENST00000588885 CES2O00748 559 aa11.52□□□□□ -0.57
RFX1-204ENST00000588885 BRINP1O60477 761 aa11.52□□□□□ -0.57
RFX1-204ENST00000588885 USP12O75317 370 aa11.52□□□□□ -0.57
RFX1-204ENST00000588885 CLDN7O95471 211 aa11.52□□□□□ -0.57
RFX1-204ENST00000588885 TRBC1P01850 177 aa11.52□□□□□ -0.57
RFX1-204ENST00000588885 FUCA1P04066 466 aa11.52□□□□□ -0.57
RFX1-204ENST00000588885 MPOP05164 745 aa11.52□□□□□ -0.57
RFX1-204ENST00000588885 MMP2P08253 660 aa11.52□□□□□ -0.57
RFX1-204ENST00000588885 HOXC4P09017 264 aaPredicted RBP11.52□□□□□ -0.57
RFX1-204ENST00000588885 KELP23276 732 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms