RNA–Protein interactions for RNA: ENST00000588860.5

SMAD4-206, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-206ENST00000588860 HLA-FP30511 346 aa8.75□□□□□ -1.01
SMAD4-206ENST00000588860 GKP32189 559 aa8.75□□□□□ -1.01
SMAD4-206ENST00000588860 MC4RP32245 332 aa8.75□□□□□ -1.01
SMAD4-206ENST00000588860 STC1P52823 247 aa8.75□□□□□ -1.01
SMAD4-206ENST00000588860 PRKAA2P54646 552 aa8.75□□□□□ -1.01
SMAD4-206ENST00000588860 AQP5P55064 265 aa8.75□□□□□ -1.01
SMAD4-206ENST00000588860 RPL26P61254 145 aaKnown RBP8.75□□□□□ -1.01
SMAD4-206ENST00000588860 NCALDP61601 193 aa8.75□□□□□ -1.01
SMAD4-206ENST00000588860 SNRPD1P62314 119 aaKnown RBP8.75□□□□□ -1.01
SMAD4-206ENST00000588860 ASPHQ12797 758 aa8.75□□□□□ -1.01
SMAD4-206ENST00000588860 BNIP1Q12981 228 aa8.75□□□□□ -1.01
SMAD4-206ENST00000588860 FAM83EQ2M2I3 478 aa8.75□□□□□ -1.01
SMAD4-206ENST00000588860 TYSND1Q2T9J0 566 aa8.75□□□□□ -1.01
SMAD4-206ENST00000588860 ZRANB3Q5FWF4 1079 aa8.75□□□□□ -1.01
SMAD4-206ENST00000588860 DGKKQ5KSL6 1271 aa8.75□□□□□ -1.01
SMAD4-206ENST00000588860 LY6G5CQ5SRR4 150 aa8.75□□□□□ -1.01
SMAD4-206ENST00000588860 AGAP9Q5VTM2 703 aa8.75□□□□□ -1.01
SMAD4-206ENST00000588860 LIPMQ5VYY2 423 aa8.75□□□□□ -1.01
SMAD4-206ENST00000588860 ZNF549Q6P9A3 640 aa8.75□□□□□ -1.01
SMAD4-206ENST00000588860 NAPRTQ6XQN6 538 aa8.75□□□□□ -1.01
SMAD4-206ENST00000588860 LYSMD3Q7Z3D4 306 aa8.75□□□□□ -1.01
SMAD4-206ENST00000588860 MTDHQ86UE4 582 aaKnown RBP8.75□□□□□ -1.01
SMAD4-206ENST00000588860 PIM3Q86V86 326 aa8.75□□□□□ -1.01
SMAD4-206ENST00000588860 FSTL5Q8N475 847 aaPredicted RBP8.75□□□□□ -1.01
SMAD4-206ENST00000588860 C12orf76Q8N812 135 aaPredicted RBP8.75□□□□□ -1.01
SMAD4-206ENST00000588860 ITFG1Q8TB96 612 aa8.75□□□□□ -1.01
SMAD4-206ENST00000588860 PIH1D2Q8WWB5 315 aa8.75□□□□□ -1.01
SMAD4-206ENST00000588860 SGF29Q96ES7 293 aa8.75□□□□□ -1.01
SMAD4-206ENST00000588860 RPL10LQ96L21 214 aaKnown RBP8.75□□□□□ -1.01
SMAD4-206ENST00000588860 GPR78Q96P69 363 aa8.75□□□□□ -1.01
SMAD4-206ENST00000588860 MRPL57Q9BQC6 102 aaKnown RBP8.75□□□□□ -1.01
SMAD4-206ENST00000588860 AARSD1Q9BTE6 412 aaKnown RBP8.75□□□□□ -1.01
SMAD4-206ENST00000588860 WWP1Q9H0M0 922 aa8.75□□□□□ -1.01
SMAD4-206ENST00000588860 LINC00597Q9H2U6 94 aa8.75□□□□□ -1.01
SMAD4-206ENST00000588860 MRPL46Q9H2W6 279 aaKnown RBP8.75□□□□□ -1.01
SMAD4-206ENST00000588860 FAM96AQ9H5X1 160 aa8.75□□□□□ -1.01
SMAD4-206ENST00000588860 TLE6Q9H808 572 aa8.75□□□□□ -1.01
SMAD4-206ENST00000588860 PNPOQ9NVS9 261 aa8.75□□□□□ -1.01
SMAD4-206ENST00000588860 OXSMQ9NWU1 459 aa8.75□□□□□ -1.01
SMAD4-206ENST00000588860 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.75□□□□□ -1.01
SMAD4-206ENST00000588860 ZMYM5Q9UJ78 669 aa8.75□□□□□ -1.01
SMAD4-206ENST00000588860 RPL26L1Q9UNX3 145 aaKnown RBP8.75□□□□□ -1.01
SMAD4-206ENST00000588860 PKP3Q9Y446 797 aa8.75□□□□□ -1.01
SMAD4-206ENST00000588860 PRRC2BQ5JSZ5 2229 aaKnown RBP8.74□□□□□ -1.01
SMAD4-206ENST00000588860 MUC22E2RYF6 1773 aaPredicted RBP8.74□□□□□ -1.01
SMAD4-206ENST00000588860 A0A0U1RQS6 177 aa8.74□□□□□ -1.01
SMAD4-206ENST00000588860 CXorf51AA0A1B0GTR3 108 aa8.74□□□□□ -1.01
SMAD4-206ENST00000588860 SLC9A3R1O14745 358 aaPredicted RBP8.74□□□□□ -1.01
SMAD4-206ENST00000588860 PFDN6O15212 129 aa8.74□□□□□ -1.01
SMAD4-206ENST00000588860 HTRA2O43464 458 aaPredicted RBP8.74□□□□□ -1.01
SMAD4-206ENST00000588860 BNIP3LO60238 219 aa8.74□□□□□ -1.01
SMAD4-206ENST00000588860 DLX3O60479 287 aa8.74□□□□□ -1.01
SMAD4-206ENST00000588860 ZNF821O75541 412 aaPredicted RBP8.74□□□□□ -1.01
SMAD4-206ENST00000588860 SRP72O76094 671 aaKnown RBP8.74□□□□□ -1.01
SMAD4-206ENST00000588860 RHOBTB1O94844 696 aa8.74□□□□□ -1.01
SMAD4-206ENST00000588860 WISP3O95389 354 aaPredicted RBP8.74□□□□□ -1.01
SMAD4-206ENST00000588860 TCF3P15923 654 aa8.74□□□□□ -1.01
SMAD4-206ENST00000588860 SERPINB3P29508 390 aa8.74□□□□□ -1.01
SMAD4-206ENST00000588860 FMO4P31512 558 aa8.74□□□□□ -1.01
SMAD4-206ENST00000588860 ARRB2P32121 409 aa8.74□□□□□ -1.01
SMAD4-206ENST00000588860 NRIP1P48552 1158 aa8.74□□□□□ -1.01
SMAD4-206ENST00000588860 SULT2A1Q06520 285 aa8.74□□□□□ -1.01
SMAD4-206ENST00000588860 DMC1Q14565 340 aa8.74□□□□□ -1.01
SMAD4-206ENST00000588860 CBX2Q14781 532 aaPredicted RBP8.74□□□□□ -1.01
SMAD4-206ENST00000588860 DUSP6Q16828 381 aa8.74□□□□□ -1.01
SMAD4-206ENST00000588860 MYLK3Q32MK0 819 aa8.74□□□□□ -1.01
SMAD4-206ENST00000588860 ACCSLQ4AC99 568 aa8.74□□□□□ -1.01
SMAD4-206ENST00000588860 TECRLQ5HYJ1 363 aa8.74□□□□□ -1.01
SMAD4-206ENST00000588860 TMC5Q6UXY8 1006 aa8.74□□□□□ -1.01
SMAD4-206ENST00000588860 WDR75Q8IWA0 830 aaKnown RBP8.74□□□□□ -1.01
SMAD4-206ENST00000588860 TMEM151AQ8N4L1 468 aa8.74□□□□□ -1.01
SMAD4-206ENST00000588860 CELF5Q8N6W0 485 aaKnown RBP8.74□□□□□ -1.01
SMAD4-206ENST00000588860 ZNF557Q8N988 423 aaPredicted RBP8.74□□□□□ -1.01
SMAD4-206ENST00000588860 OR2AP1Q8NGE2 309 aa8.74□□□□□ -1.01
SMAD4-206ENST00000588860 OR6Y1Q8NGX8 325 aa8.74□□□□□ -1.01
SMAD4-206ENST00000588860 PIWIL2Q8TC59 973 aaKnown RBP8.74□□□□□ -1.01
SMAD4-206ENST00000588860 GDPD5Q8WTR4 605 aa8.74□□□□□ -1.01
SMAD4-206ENST00000588860 LPGAT1Q92604 370 aa8.74□□□□□ -1.01
SMAD4-206ENST00000588860 SKA1Q96BD8 255 aa8.74□□□□□ -1.01
SMAD4-206ENST00000588860 OTUB2Q96DC9 234 aa8.74□□□□□ -1.01
SMAD4-206ENST00000588860 TCF12Q99081 682 aa8.74□□□□□ -1.01
SMAD4-206ENST00000588860 SORT1Q99523 831 aa8.74□□□□□ -1.01
SMAD4-206ENST00000588860 SIKE1Q9BRV8 207 aa8.74□□□□□ -1.01
SMAD4-206ENST00000588860 GATA5Q9BWX5 397 aaPredicted RBP8.74□□□□□ -1.01
SMAD4-206ENST00000588860 CEP44Q9C0F1 390 aa8.74□□□□□ -1.01
SMAD4-206ENST00000588860 CCDC68Q9H2F9 335 aa8.74□□□□□ -1.01
SMAD4-206ENST00000588860 NKX2-4Q9H2Z4 354 aa8.74□□□□□ -1.01
SMAD4-206ENST00000588860 ZDHHC6Q9H6R6 413 aa8.74□□□□□ -1.01
SMAD4-206ENST00000588860 MAGEE1Q9HCI5 957 aa8.74□□□□□ -1.01
SMAD4-206ENST00000588860 MARK1Q9P0L2 795 aa8.74□□□□□ -1.01
SMAD4-206ENST00000588860 HECAQ9UBI9 543 aaPredicted RBP8.74□□□□□ -1.01
SMAD4-206ENST00000588860 HS3ST2Q9Y278 367 aa8.74□□□□□ -1.01
SMAD4-206ENST00000588860 COL4A3Q01955 1670 aa8.74□□□□□ -1.01
SMAD4-206ENST00000588860 DENND4AQ7Z401 1863 aa8.73□□□□□ -1.01
SMAD4-206ENST00000588860 A0A0J9YYE9 177 aa8.73□□□□□ -1.01
SMAD4-206ENST00000588860 C1orf232A0A0U1RR37 186 aa8.73□□□□□ -1.01
SMAD4-206ENST00000588860 CFAP73A6NFT4 308 aa8.73□□□□□ -1.01
SMAD4-206ENST00000588860 CAPN8A6NHC0 703 aa8.73□□□□□ -1.01
SMAD4-206ENST00000588860 TARM1B6A8C7 271 aa8.73□□□□□ -1.01
SMAD4-206ENST00000588860 F8W8V4 182 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms