RNA–Protein interactions for RNA: ENST00000588692.5

DDX39A-208, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 1,478 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-208ENST00000588692 DAAM2Q86T65 1068 aa14.39□□□□□ -0.11
DDX39A-208ENST00000588692 LSMEM2Q8N112 164 aa14.39□□□□□ -0.11
DDX39A-208ENST00000588692 FAM46DQ8NEK8 389 aa14.39□□□□□ -0.11
DDX39A-208ENST00000588692 EXD1Q8NHP7 514 aa14.39□□□□□ -0.11
DDX39A-208ENST00000588692 SNIP1Q8TAD8 396 aaKnown RBP14.39□□□□□ -0.11
DDX39A-208ENST00000588692 CCHCR1Q8TD31 782 aa14.39□□□□□ -0.11
DDX39A-208ENST00000588692 GPBAR1Q8TDU6 330 aa14.39□□□□□ -0.11
DDX39A-208ENST00000588692 TFB1MQ8WVM0 346 aaKnown RBP14.39□□□□□ -0.11
DDX39A-208ENST00000588692 P3H4Q92791 437 aa14.39□□□□□ -0.11
DDX39A-208ENST00000588692 CCDC74AQ96AQ1 378 aa14.39□□□□□ -0.11
DDX39A-208ENST00000588692 AGAP3Q96P47 875 aa14.39□□□□□ -0.11
DDX39A-208ENST00000588692 SMIM14Q96QK8 99 aa14.39□□□□□ -0.11
DDX39A-208ENST00000588692 GOLPH3Q9H4A6 298 aa14.39□□□□□ -0.11
DDX39A-208ENST00000588692 PKD2L2Q9NZM6 624 aa14.39□□□□□ -0.11
DDX39A-208ENST00000588692 ZFHX4Q86UP3 3567 aa14.39□□□□□ -0.11
DDX39A-208ENST00000588692 URB1O60287 2271 aaKnown RBP14.39□□□□□ -0.11
DDX39A-208ENST00000588692 hCG_1818297A0A087WSY0 165 aa14.38□□□□□ -0.11
DDX39A-208ENST00000588692 A0A0U1RQS6 177 aa14.38□□□□□ -0.11
DDX39A-208ENST00000588692 BTNL10A8MVZ5 291 aa14.38□□□□□ -0.11
DDX39A-208ENST00000588692 USP12O75317 370 aa14.38□□□□□ -0.11
DDX39A-208ENST00000588692 DXOO77932 396 aaKnown RBP14.38□□□□□ -0.11
DDX39A-208ENST00000588692 PNLIPP16233 465 aa14.38□□□□□ -0.11
DDX39A-208ENST00000588692 GLB1P16278 677 aa14.38□□□□□ -0.11
DDX39A-208ENST00000588692 LSSP48449 732 aa14.38□□□□□ -0.11
DDX39A-208ENST00000588692 SPIDRQ14159 915 aa14.38□□□□□ -0.11
DDX39A-208ENST00000588692 PPP2R5EQ16537 467 aa14.38□□□□□ -0.11
DDX39A-208ENST00000588692 C14orf28Q4W4Y0 310 aa14.38□□□□□ -0.11
DDX39A-208ENST00000588692 TEX44Q53QW1 395 aa14.38□□□□□ -0.11
DDX39A-208ENST00000588692 CCDC50Q8IVM0 306 aa14.38□□□□□ -0.11
DDX39A-208ENST00000588692 SCAMP4Q969E2 229 aa14.38□□□□□ -0.11
DDX39A-208ENST00000588692 TADA1Q96BN2 335 aa14.38□□□□□ -0.11
DDX39A-208ENST00000588692 SCARF2Q96GP6 870 aaPredicted RBP14.38□□□□□ -0.11
DDX39A-208ENST00000588692 HIC2Q96JB3 615 aa14.38□□□□□ -0.11
DDX39A-208ENST00000588692 TRIB3Q96RU7 358 aa14.38□□□□□ -0.11
DDX39A-208ENST00000588692 CEP41Q9BYV8 373 aa14.38□□□□□ -0.11
DDX39A-208ENST00000588692 CDH19Q9H159 772 aa14.38□□□□□ -0.11
DDX39A-208ENST00000588692 DPEP2Q9H4A9 486 aa14.38□□□□□ -0.11
DDX39A-208ENST00000588692 POLR1BQ9H9Y6 1135 aa14.38□□□□□ -0.11
DDX39A-208ENST00000588692 APPL1Q9UKG1 709 aa14.38□□□□□ -0.11
DDX39A-208ENST00000588692 SUFUQ9UMX1 484 aa14.38□□□□□ -0.11
DDX39A-208ENST00000588692 TFR2Q9UP52 801 aa14.38□□□□□ -0.11
DDX39A-208ENST00000588692 ARHGEF17Q96PE2 2063 aaPredicted RBP14.38□□□□□ -0.11
DDX39A-208ENST00000588692 B4DGG1 531 aa14.38□□□□□ -0.11
DDX39A-208ENST00000588692 NTN3O00634 580 aaPredicted RBP14.38□□□□□ -0.11
DDX39A-208ENST00000588692 NUDT21O43809 227 aaKnown RBP14.38□□□□□ -0.11
DDX39A-208ENST00000588692 NOBOXO60393 691 aa14.38□□□□□ -0.11
DDX39A-208ENST00000588692 PECAM1P16284 738 aaPredicted RBP14.38□□□□□ -0.11
DDX39A-208ENST00000588692 PTPN3P26045 913 aa14.38□□□□□ -0.11
DDX39A-208ENST00000588692 GNPDA1P46926 289 aa14.38□□□□□ -0.11
DDX39A-208ENST00000588692 MARCKSL1P49006 195 aa14.38□□□□□ -0.11
DDX39A-208ENST00000588692 SPINT3P49223 89 aa14.38□□□□□ -0.11
DDX39A-208ENST00000588692 COPS2P61201 443 aa14.38□□□□□ -0.11
DDX39A-208ENST00000588692 GABREP78334 506 aa14.38□□□□□ -0.11
DDX39A-208ENST00000588692 CDK18Q07002 472 aa14.38□□□□□ -0.11
DDX39A-208ENST00000588692 TBC1D25Q3MII6 688 aa14.38□□□□□ -0.11
DDX39A-208ENST00000588692 CERCAMQ5T4B2 595 aa14.38□□□□□ -0.11
DDX39A-208ENST00000588692 KAZNQ674X7 775 aa14.38□□□□□ -0.11
DDX39A-208ENST00000588692 IGF2-ASQ6U949 168 aa14.38□□□□□ -0.11
DDX39A-208ENST00000588692 RFLNAQ6ZTI6 216 aa14.38□□□□□ -0.11
DDX39A-208ENST00000588692 CCL4L1Q8NHW4 92 aa14.38□□□□□ -0.11
DDX39A-208ENST00000588692 FGF11Q92914 225 aa14.38□□□□□ -0.11
DDX39A-208ENST00000588692 COX14Q96I36 57 aa14.38□□□□□ -0.11
DDX39A-208ENST00000588692 TEKT5Q96M29 485 aa14.38□□□□□ -0.11
DDX39A-208ENST00000588692 SRPK1Q96SB4 655 aaKnown RBP14.38□□□□□ -0.11
DDX39A-208ENST00000588692 VAT1Q99536 393 aa14.38□□□□□ -0.11
DDX39A-208ENST00000588692 RIOK2Q9BVS4 552 aaKnown RBP14.38□□□□□ -0.11
DDX39A-208ENST00000588692 GLOD4Q9HC38 313 aa14.38□□□□□ -0.11
DDX39A-208ENST00000588692 RAD18Q9NS91 495 aa14.38□□□□□ -0.11
DDX39A-208ENST00000588692 SAE1Q9UBE0 346 aaPredicted RBP14.38□□□□□ -0.11
DDX39A-208ENST00000588692 LHX6Q9UPM6 363 aa14.38□□□□□ -0.11
DDX39A-208ENST00000588692 HACD1B0YJ81 288 aa14.37□□□□□ -0.11
DDX39A-208ENST00000588692 RRP8O43159 456 aaKnown RBP14.37□□□□□ -0.11
DDX39A-208ENST00000588692 FUCA1P04066 466 aa14.37□□□□□ -0.11
DDX39A-208ENST00000588692 CTNNA1P35221 906 aaKnown RBP14.37□□□□□ -0.11
DDX39A-208ENST00000588692 EIF2S3P41091 472 aaKnown RBP14.37□□□□□ -0.11
DDX39A-208ENST00000588692 LRP8Q14114 963 aa14.37□□□□□ -0.11
DDX39A-208ENST00000588692 GALNT3Q14435 633 aa14.37□□□□□ -0.11
DDX39A-208ENST00000588692 HLTFQ14527 1009 aaKnown RBP eCLIP14.37□□□□□ -0.11
DDX39A-208ENST00000588692 HENMT1Q5T8I9 393 aaKnown RBP14.37□□□□□ -0.11
DDX39A-208ENST00000588692 CCDC70Q6NSX1 233 aa14.37□□□□□ -0.11
DDX39A-208ENST00000588692 DOK6Q6PKX4 331 aa14.37□□□□□ -0.11
DDX39A-208ENST00000588692 BBS12Q6ZW61 710 aa14.37□□□□□ -0.11
DDX39A-208ENST00000588692 GAS2L3Q86XJ1 694 aa14.37□□□□□ -0.11
DDX39A-208ENST00000588692 NRROSQ86YC3 692 aa14.37□□□□□ -0.11
DDX39A-208ENST00000588692 KRT35Q92764 455 aa14.37□□□□□ -0.11
DDX39A-208ENST00000588692 ZNF578Q96N58 590 aaPredicted RBP14.37□□□□□ -0.11
DDX39A-208ENST00000588692 OR2M4Q96R27 311 aa14.37□□□□□ -0.11
DDX39A-208ENST00000588692 GFM1Q96RP9 751 aaKnown RBP14.37□□□□□ -0.11
DDX39A-208ENST00000588692 AGAP2Q99490 1192 aa14.37□□□□□ -0.11
DDX39A-208ENST00000588692 FAM83DQ9H4H8 585 aa14.37□□□□□ -0.11
DDX39A-208ENST00000588692 SYNDIG1Q9H7V2 258 aa14.37□□□□□ -0.11
DDX39A-208ENST00000588692 ZFYVE1Q9HBF4 777 aa14.37□□□□□ -0.11
DDX39A-208ENST00000588692 MAGEE1Q9HCI5 957 aa14.37□□□□□ -0.11
DDX39A-208ENST00000588692 VPS18Q9P253 973 aa14.37□□□□□ -0.11
DDX39A-208ENST00000588692 NFKBIL1Q9UBC1 381 aaPredicted RBP14.37□□□□□ -0.11
DDX39A-208ENST00000588692 RABGEF1Q9UJ41 708 aa14.37□□□□□ -0.11
DDX39A-208ENST00000588692 ENTPD2Q9Y5L3 495 aa14.37□□□□□ -0.11
DDX39A-208ENST00000588692 ZFC3H1O60293 1989 aaKnown RBP14.36□□□□□ -0.11
DDX39A-208ENST00000588692 CCDC66A2RUB6 948 aa14.36□□□□□ -0.11
DDX39A-208ENST00000588692 RCCD1A6NED2 376 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms