RNA–Protein interactions for RNA: ENST00000588210.1

CCDC43-203, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC43, Length 2,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-203ENST00000588210 LOC100653049A0A140TA62 436 aa14.65□□□□□ -0.06
CCDC43-203ENST00000588210 EME2A4GXA9 379 aaPredicted RBP14.65□□□□□ -0.06
CCDC43-203ENST00000588210 MATN2O00339 956 aa14.65□□□□□ -0.06
CCDC43-203ENST00000588210 STK25O00506 426 aa14.65□□□□□ -0.06
CCDC43-203ENST00000588210 ATP9BO43861 1147 aa14.65□□□□□ -0.06
CCDC43-203ENST00000588210 RNASEH1O60930 286 aaKnown RBP14.65□□□□□ -0.06
CCDC43-203ENST00000588210 KRT34O76011 436 aa14.65□□□□□ -0.06
CCDC43-203ENST00000588210 ADH5P11766 374 aa14.65□□□□□ -0.06
CCDC43-203ENST00000588210 CALRP27797 417 aaKnown RBP14.65□□□□□ -0.06
CCDC43-203ENST00000588210 SERPINB6P35237 376 aa14.65□□□□□ -0.06
CCDC43-203ENST00000588210 ABCG1P45844 678 aa14.65□□□□□ -0.06
CCDC43-203ENST00000588210 PAPOLAP51003 745 aaKnown RBP14.65□□□□□ -0.06
CCDC43-203ENST00000588210 MSLNQ13421 630 aaPredicted RBP14.65□□□□□ -0.06
CCDC43-203ENST00000588210 PPP2R5DQ14738 602 aa14.65□□□□□ -0.06
CCDC43-203ENST00000588210 SFT2D3Q587I9 215 aa14.65□□□□□ -0.06
CCDC43-203ENST00000588210 TCHHL1Q5QJ38 904 aaPredicted RBP14.65□□□□□ -0.06
CCDC43-203ENST00000588210 ADGRF1Q5T601 910 aa14.65□□□□□ -0.06
CCDC43-203ENST00000588210 LIPMQ5VYY2 423 aa14.65□□□□□ -0.06
CCDC43-203ENST00000588210 KBTBD6Q86V97 674 aa14.65□□□□□ -0.06
CCDC43-203ENST00000588210 TMEM25Q86YD3 366 aa14.65□□□□□ -0.06
CCDC43-203ENST00000588210 MFN1Q8IWA4 741 aa14.65□□□□□ -0.06
CCDC43-203ENST00000588210 RNF34Q969K3 372 aa14.65□□□□□ -0.06
CCDC43-203ENST00000588210 ACE2Q9BYF1 805 aaPredicted RBP14.65□□□□□ -0.06
CCDC43-203ENST00000588210 DRC3Q9H069 523 aa14.65□□□□□ -0.06
CCDC43-203ENST00000588210 ILKAPQ9H0C8 392 aaPredicted RBP14.65□□□□□ -0.06
CCDC43-203ENST00000588210 IARS2Q9NSE4 1012 aaKnown RBP14.65□□□□□ -0.06
CCDC43-203ENST00000588210 MARK1Q9P0L2 795 aa14.65□□□□□ -0.06
CCDC43-203ENST00000588210 H3BNX3 289 aa14.64□□□□□ -0.07
CCDC43-203ENST00000588210 HOXC11O43248 304 aaPredicted RBP14.64□□□□□ -0.07
CCDC43-203ENST00000588210 PEX1O43933 1283 aa14.64□□□□□ -0.07
CCDC43-203ENST00000588210 ACSL4O60488 711 aa14.64□□□□□ -0.07
CCDC43-203ENST00000588210 PDGFBP01127 241 aaPredicted RBP14.64□□□□□ -0.07
CCDC43-203ENST00000588210 F7P08709 466 aaPredicted RBP14.64□□□□□ -0.07
CCDC43-203ENST00000588210 UQCRBP14927 111 aa14.64□□□□□ -0.07
CCDC43-203ENST00000588210 CD72P21854 359 aa14.64□□□□□ -0.07
CCDC43-203ENST00000588210 PEX2P28328 305 aa14.64□□□□□ -0.07
CCDC43-203ENST00000588210 ROR2Q01974 943 aaKnown RBP14.64□□□□□ -0.07
CCDC43-203ENST00000588210 PEX6Q13608 980 aa14.64□□□□□ -0.07
CCDC43-203ENST00000588210 ARL13BQ3SXY8 428 aa14.64□□□□□ -0.07
CCDC43-203ENST00000588210 TMEM31Q5JXX7 168 aa14.64□□□□□ -0.07
CCDC43-203ENST00000588210 THEMIS2Q5TEJ8 643 aa14.64□□□□□ -0.07
CCDC43-203ENST00000588210 ATP6V0D2Q8N8Y2 350 aa14.64□□□□□ -0.07
CCDC43-203ENST00000588210 ACVR1CQ8NER5 493 aa14.64□□□□□ -0.07
CCDC43-203ENST00000588210 FLCNQ8NFG4 579 aa14.64□□□□□ -0.07
CCDC43-203ENST00000588210 CHFRQ96EP1 664 aa14.64□□□□□ -0.07
CCDC43-203ENST00000588210 BTN2A3PQ96KV6 586 aa14.64□□□□□ -0.07
CCDC43-203ENST00000588210 TEKT5Q96M29 485 aa14.64□□□□□ -0.07
CCDC43-203ENST00000588210 DDX50Q9BQ39 737 aaKnown RBP14.64□□□□□ -0.07
CCDC43-203ENST00000588210 OSBPL6Q9BZF3 934 aa14.64□□□□□ -0.07
CCDC43-203ENST00000588210 RHOJQ9H4E5 214 aa14.64□□□□□ -0.07
CCDC43-203ENST00000588210 FAM86C2PA6NEL3 165 aa14.64□□□□□ -0.07
CCDC43-203ENST00000588210 KCNU1A8MYU2 1149 aa14.64□□□□□ -0.07
CCDC43-203ENST00000588210 HDAC3O15379 428 aa14.64□□□□□ -0.07
CCDC43-203ENST00000588210 ZMPSTE24O75844 475 aa14.64□□□□□ -0.07
CCDC43-203ENST00000588210 ZCCHC18P0CG32 403 aa14.64□□□□□ -0.07
CCDC43-203ENST00000588210 THRAP10827 490 aa14.64□□□□□ -0.07
CCDC43-203ENST00000588210 MPSTP25325 297 aa14.64□□□□□ -0.07
CCDC43-203ENST00000588210 PIK3R1P27986 724 aa14.64□□□□□ -0.07
CCDC43-203ENST00000588210 EIF2DP41214 584 aaKnown RBP14.64□□□□□ -0.07
CCDC43-203ENST00000588210 CXCR3P49682 368 aa14.64□□□□□ -0.07
CCDC43-203ENST00000588210 CLCN5P51795 746 aa14.64□□□□□ -0.07
CCDC43-203ENST00000588210 CDH17Q12864 832 aa14.64□□□□□ -0.07
CCDC43-203ENST00000588210 GRM3Q14832 879 aa14.64□□□□□ -0.07
CCDC43-203ENST00000588210 BRMS1LQ5PSV4 323 aa14.64□□□□□ -0.07
CCDC43-203ENST00000588210 LPCAT4Q643R3 524 aa14.64□□□□□ -0.07
CCDC43-203ENST00000588210 CWF19L1Q69YN2 538 aaKnown RBP14.64□□□□□ -0.07
CCDC43-203ENST00000588210 NAPEPLDQ6IQ20 393 aa14.64□□□□□ -0.07
CCDC43-203ENST00000588210 TXNDC11Q6PKC3 985 aa14.64□□□□□ -0.07
CCDC43-203ENST00000588210 C16orf89Q6UX73 402 aa14.64□□□□□ -0.07
CCDC43-203ENST00000588210 TPGS1Q6ZTW0 290 aa14.64□□□□□ -0.07
CCDC43-203ENST00000588210 SETD3Q86TU7 594 aaPredicted RBP14.64□□□□□ -0.07
CCDC43-203ENST00000588210 ZC3HC1Q86WB0 502 aaKnown RBP14.64□□□□□ -0.07
CCDC43-203ENST00000588210 LENG8Q96PV6 779 aaPredicted RBP14.64□□□□□ -0.07
CCDC43-203ENST00000588210 EPAS1Q99814 870 aa14.64□□□□□ -0.07
CCDC43-203ENST00000588210 SH3GL3Q99963 347 aa14.64□□□□□ -0.07
CCDC43-203ENST00000588210 KIFC1Q9BW19 673 aa14.64□□□□□ -0.07
CCDC43-203ENST00000588210 ZNF385DQ9H6B1 395 aa14.64□□□□□ -0.07
CCDC43-203ENST00000588210 WDCPQ9H6R7 721 aa14.64□□□□□ -0.07
CCDC43-203ENST00000588210 LTB4R2Q9NPC1 389 aa14.64□□□□□ -0.07
CCDC43-203ENST00000588210 CHRAC1Q9NRG0 131 aa14.64□□□□□ -0.07
CCDC43-203ENST00000588210 TBC1D30Q9Y2I9 924 aa14.64□□□□□ -0.07
CCDC43-203ENST00000588210 MIA3Q5JRA6 1907 aa14.63□□□□□ -0.07
CCDC43-203ENST00000588210 PSMD3O43242 534 aa14.63□□□□□ -0.07
CCDC43-203ENST00000588210 CYBBP04839 570 aa14.63□□□□□ -0.07
CCDC43-203ENST00000588210 CHRNGP07510 517 aa14.63□□□□□ -0.07
CCDC43-203ENST00000588210 SBK3P0C264 359 aa14.63□□□□□ -0.07
CCDC43-203ENST00000588210 CHRM1P11229 460 aaPredicted RBP14.63□□□□□ -0.07
CCDC43-203ENST00000588210 NMBRP28336 390 aa14.63□□□□□ -0.07
CCDC43-203ENST00000588210 ADSLP30566 484 aaPredicted RBP14.63□□□□□ -0.07
CCDC43-203ENST00000588210 RPL14P50914 215 aaKnown RBP14.63□□□□□ -0.07
CCDC43-203ENST00000588210 AQP4P55087 323 aa14.63□□□□□ -0.07
CCDC43-203ENST00000588210 ZNF33AQ06730 810 aa14.63□□□□□ -0.07
CCDC43-203ENST00000588210 PRKAA1Q13131 559 aa14.63□□□□□ -0.07
CCDC43-203ENST00000588210 PRPSAP1Q14558 356 aa14.63□□□□□ -0.07
CCDC43-203ENST00000588210 GAB4Q2WGN9 574 aa14.63□□□□□ -0.07
CCDC43-203ENST00000588210 MPPE1Q53F39 396 aa14.63□□□□□ -0.07
CCDC43-203ENST00000588210 SEL1L3Q68CR1 1132 aa14.63□□□□□ -0.07
CCDC43-203ENST00000588210 ST13P4Q8IZP2 240 aaPredicted RBP14.63□□□□□ -0.07
CCDC43-203ENST00000588210 TMEM151AQ8N4L1 468 aa14.63□□□□□ -0.07
CCDC43-203ENST00000588210 FBXL6Q8N531 539 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms