RNA–Protein interactions for RNA: ENST00000587537.5

CLPTM1-207, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 737 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-207ENST00000587537 HORMAD1Q86X24 394 aa10.32□□□□□ -0.76
CLPTM1-207ENST00000587537 LRRC6Q86X45 466 aa10.32□□□□□ -0.76
CLPTM1-207ENST00000587537 GSPT2Q8IYD1 628 aaKnown RBP10.32□□□□□ -0.76
CLPTM1-207ENST00000587537 AGGF1Q8N302 714 aaeCLIP10.32□□□□□ -0.76
CLPTM1-207ENST00000587537 TRAM1L1Q8N609 369 aa10.32□□□□□ -0.76
CLPTM1-207ENST00000587537 OR4L1Q8NH43 312 aa10.32□□□□□ -0.76
CLPTM1-207ENST00000587537 ANKRD7Q92527 254 aa10.32□□□□□ -0.76
CLPTM1-207ENST00000587537 FOXJ1Q92949 421 aa10.32□□□□□ -0.76
CLPTM1-207ENST00000587537 NUS1Q96E22 293 aa10.32□□□□□ -0.76
CLPTM1-207ENST00000587537 MFSD3Q96ES6 412 aa10.32□□□□□ -0.76
CLPTM1-207ENST00000587537 DTD2Q96FN9 168 aa10.32□□□□□ -0.76
CLPTM1-207ENST00000587537 CFAP36Q96G28 342 aa10.32□□□□□ -0.76
CLPTM1-207ENST00000587537 COQ10AQ96MF6 247 aa10.32□□□□□ -0.76
CLPTM1-207ENST00000587537 PWWP2AQ96N64 755 aa10.32□□□□□ -0.76
CLPTM1-207ENST00000587537 LENG8Q96PV6 779 aaPredicted RBP10.32□□□□□ -0.76
CLPTM1-207ENST00000587537 VPS35Q96QK1 796 aa10.32□□□□□ -0.76
CLPTM1-207ENST00000587537 RUFY1Q96T51 708 aa10.32□□□□□ -0.76
CLPTM1-207ENST00000587537 TMEM109Q9BVC6 243 aa10.32□□□□□ -0.76
CLPTM1-207ENST00000587537 C1QTNF2Q9BXJ5 285 aa10.32□□□□□ -0.76
CLPTM1-207ENST00000587537 FAM83DQ9H4H8 585 aa10.32□□□□□ -0.76
CLPTM1-207ENST00000587537 C20orf96Q9NUD7 363 aaPredicted RBP10.32□□□□□ -0.76
CLPTM1-207ENST00000587537 INTS10Q9NVR2 710 aaKnown RBP10.32□□□□□ -0.76
CLPTM1-207ENST00000587537 POLR3BQ9NW08 1133 aaPredicted RBP10.32□□□□□ -0.76
CLPTM1-207ENST00000587537 SMOXQ9NWM0 555 aa10.32□□□□□ -0.76
CLPTM1-207ENST00000587537 PIH1D1Q9NWS0 290 aaKnown RBP10.32□□□□□ -0.76
CLPTM1-207ENST00000587537 WSB2Q9NYS7 404 aaPredicted RBP10.32□□□□□ -0.76
CLPTM1-207ENST00000587537 COMMD10Q9Y6G5 202 aa10.32□□□□□ -0.76
CLPTM1-207ENST00000587537 MYLKQ15746 1914 aa10.32□□□□□ -0.76
CLPTM1-207ENST00000587537 PLXNA2O75051 1894 aa10.32□□□□□ -0.76
CLPTM1-207ENST00000587537 TRPM6Q9BX84 2022 aa10.31□□□□□ -0.76
CLPTM1-207ENST00000587537 TBC1D3DA0A087WVF3 549 aa10.31□□□□□ -0.76
CLPTM1-207ENST00000587537 TBC1D3IA0A087WXS9 549 aa10.31□□□□□ -0.76
CLPTM1-207ENST00000587537 TBC1D3EA0A087X179 549 aa10.31□□□□□ -0.76
CLPTM1-207ENST00000587537 TBC1D3KA0A087X1G2 549 aa10.31□□□□□ -0.76
CLPTM1-207ENST00000587537 TBC1D3FA6NER0 549 aaPredicted RBP10.31□□□□□ -0.76
CLPTM1-207ENST00000587537 FAM159BA6NKW6 160 aa10.31□□□□□ -0.76
CLPTM1-207ENST00000587537 AGAP14A8MT82 685 aa10.31□□□□□ -0.76
CLPTM1-207ENST00000587537 GPR89AB7ZAQ6 455 aa10.31□□□□□ -0.76
CLPTM1-207ENST00000587537 TBC1D3LB9A6J9 549 aa10.31□□□□□ -0.76
CLPTM1-207ENST00000587537 TNFRSF10AO00220 468 aa10.31□□□□□ -0.76
CLPTM1-207ENST00000587537 QSOX1O00391 747 aa10.31□□□□□ -0.76
CLPTM1-207ENST00000587537 LATO43561 262 aa10.31□□□□□ -0.76
CLPTM1-207ENST00000587537 NDUFS2O75306 463 aa10.31□□□□□ -0.76
CLPTM1-207ENST00000587537 SRP72O76094 671 aaKnown RBP10.31□□□□□ -0.76
CLPTM1-207ENST00000587537 VAPBO95292 243 aa10.31□□□□□ -0.76
CLPTM1-207ENST00000587537 TBC1D3HP0C7X1 549 aa10.31□□□□□ -0.76
CLPTM1-207ENST00000587537 PIRTP0C851 137 aa10.31□□□□□ -0.76
CLPTM1-207ENST00000587537 GPR89BP0CG08 455 aa10.31□□□□□ -0.76
CLPTM1-207ENST00000587537 RALBP11234 206 aa10.31□□□□□ -0.76
CLPTM1-207ENST00000587537 BPIP17213 487 aa10.31□□□□□ -0.76
CLPTM1-207ENST00000587537 NMBRP28336 390 aa10.31□□□□□ -0.76
CLPTM1-207ENST00000587537 DPP6P42658 865 aa10.31□□□□□ -0.76
CLPTM1-207ENST00000587537 ARCN1P48444 511 aaKnown RBP10.31□□□□□ -0.76
CLPTM1-207ENST00000587537 SERPINB9P50453 376 aa10.31□□□□□ -0.76
CLPTM1-207ENST00000587537 CSE1LP55060 971 aaKnown RBP10.31□□□□□ -0.76
CLPTM1-207ENST00000587537 ADARP55265 1226 aaKnown RBP10.31□□□□□ -0.76
CLPTM1-207ENST00000587537 TAS2R38P59533 333 aa10.31□□□□□ -0.76
CLPTM1-207ENST00000587537 GPX6P59796 221 aa10.31□□□□□ -0.76
CLPTM1-207ENST00000587537 IFFO1Q0D2I5 559 aa10.31□□□□□ -0.76
CLPTM1-207ENST00000587537 NFATC2Q13469 925 aa10.31□□□□□ -0.76
CLPTM1-207ENST00000587537 SLC29A2Q14542 456 aa10.31□□□□□ -0.76
CLPTM1-207ENST00000587537 POM121L1PQ3SYA9 428 aa10.31□□□□□ -0.76
CLPTM1-207ENST00000587537 FAM182AQ5T1J6 154 aa10.31□□□□□ -0.76
CLPTM1-207ENST00000587537 HENMT1Q5T8I9 393 aaKnown RBP10.31□□□□□ -0.76
CLPTM1-207ENST00000587537 TBC1D3GQ6DHY5 549 aa10.31□□□□□ -0.76
CLPTM1-207ENST00000587537 TBC1D3CQ6IPX1 549 aa10.31□□□□□ -0.76
CLPTM1-207ENST00000587537 ESRP1Q6NXG1 681 aaKnown RBP10.31□□□□□ -0.76
CLPTM1-207ENST00000587537 FBXO38Q6PIJ6 1188 aa10.31□□□□□ -0.76
CLPTM1-207ENST00000587537 MARK2Q7KZI7 788 aaKnown RBP10.31□□□□□ -0.76
CLPTM1-207ENST00000587537 WDR5BQ86VZ2 330 aa10.31□□□□□ -0.76
CLPTM1-207ENST00000587537 TDRPQ86YL5 185 aa10.31□□□□□ -0.76
CLPTM1-207ENST00000587537 IGDCC3Q8IVU1 814 aa10.31□□□□□ -0.76
CLPTM1-207ENST00000587537 C1orf210Q8IVY1 113 aa10.31□□□□□ -0.76
CLPTM1-207ENST00000587537 TBC1D3Q8IZP1 549 aaPredicted RBP10.31□□□□□ -0.76
CLPTM1-207ENST00000587537 OR13C4Q8NGS5 318 aa10.31□□□□□ -0.76
CLPTM1-207ENST00000587537 OR6P1Q8NGX9 317 aa10.31□□□□□ -0.76
CLPTM1-207ENST00000587537 HDAC10Q969S8 669 aa10.31□□□□□ -0.76
CLPTM1-207ENST00000587537 DNAJC1Q96KC8 554 aaKnown RBP10.31□□□□□ -0.76
CLPTM1-207ENST00000587537 HHIPQ96QV1 700 aa10.31□□□□□ -0.76
CLPTM1-207ENST00000587537 CPNE1Q99829 537 aa10.31□□□□□ -0.76
CLPTM1-207ENST00000587537 WDR83Q9BRX9 315 aaKnown RBP10.31□□□□□ -0.76
CLPTM1-207ENST00000587537 ZCCHC2Q9C0B9 1178 aaKnown RBP10.31□□□□□ -0.76
CLPTM1-207ENST00000587537 STMN4Q9H169 189 aaPredicted RBP10.31□□□□□ -0.76
CLPTM1-207ENST00000587537 PPANQ9NQ55 473 aaKnown RBP10.31□□□□□ -0.76
CLPTM1-207ENST00000587537 CATSPERZQ9NTU4 200 aa10.31□□□□□ -0.76
CLPTM1-207ENST00000587537 VPS18Q9P253 973 aa10.31□□□□□ -0.76
CLPTM1-207ENST00000587537 ZNF180Q9UJW8 692 aa10.31□□□□□ -0.76
CLPTM1-207ENST00000587537 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.31□□□□□ -0.76
CLPTM1-207ENST00000587537 TRBV5-4A0A0C4DH59 114 aa10.3□□□□□ -0.76
CLPTM1-207ENST00000587537 EXOC1LA0A1B0GW35 172 aa10.3□□□□□ -0.76
CLPTM1-207ENST00000587537 KLHL33A6NCF5 533 aa10.3□□□□□ -0.76
CLPTM1-207ENST00000587537 ANTXRLA6NF34 631 aa10.3□□□□□ -0.76
CLPTM1-207ENST00000587537 GOLGA6L10A6NI86 522 aa10.3□□□□□ -0.76
CLPTM1-207ENST00000587537 C10orf142B7Z368 130 aa10.3□□□□□ -0.76
CLPTM1-207ENST00000587537 CFAP99D6REC4 459 aa10.3□□□□□ -0.76
CLPTM1-207ENST00000587537 H3BMM5 538 aa10.3□□□□□ -0.76
CLPTM1-207ENST00000587537 K7ESF4 209 aa10.3□□□□□ -0.76
CLPTM1-207ENST00000587537 AURKAO14965 403 aa10.3□□□□□ -0.76
CLPTM1-207ENST00000587537 CD3EAPO15446 510 aaKnown RBP10.3□□□□□ -0.76
CLPTM1-207ENST00000587537 SPINT1O43278 529 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms