RNA–Protein interactions for RNA: ENST00000586477.1

ATG4D-205, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 628 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-205ENST00000586477 RRAGDQ9NQL2 400 aaPredicted RBP16.11■□□□□ 0.17
ATG4D-205ENST00000586477 KCTD5Q9NXV2 234 aa16.11■□□□□ 0.17
ATG4D-205ENST00000586477 PLXNB3Q9ULL4 1909 aa16.11■□□□□ 0.17
ATG4D-205ENST00000586477 PTPRBP23467 1997 aa16.11■□□□□ 0.17
ATG4D-205ENST00000586477 A0A1B0GTQ1 180 aa16.1■□□□□ 0.17
ATG4D-205ENST00000586477 PPFIA2O75334 1257 aa16.1■□□□□ 0.17
ATG4D-205ENST00000586477 CRTAMO95727 393 aa16.1■□□□□ 0.17
ATG4D-205ENST00000586477 AGTP01019 485 aa16.1■□□□□ 0.17
ATG4D-205ENST00000586477 PRLP01236 227 aa16.1■□□□□ 0.17
ATG4D-205ENST00000586477 PROS1P07225 676 aa16.1■□□□□ 0.17
ATG4D-205ENST00000586477 PDHA1P08559 390 aa16.1■□□□□ 0.17
ATG4D-205ENST00000586477 RHOXF2BP0C7M4 288 aa16.1■□□□□ 0.17
ATG4D-205ENST00000586477 ATXN1LP0C7T5 689 aaKnown RBP16.1■□□□□ 0.17
ATG4D-205ENST00000586477 TIMP2P16035 220 aa16.1■□□□□ 0.17
ATG4D-205ENST00000586477 CD38P28907 300 aa16.1■□□□□ 0.17
ATG4D-205ENST00000586477 ARL4CP56559 192 aa16.1■□□□□ 0.17
ATG4D-205ENST00000586477 NXPH1P58417 271 aa16.1■□□□□ 0.17
ATG4D-205ENST00000586477 IL9RQ01113 521 aa16.1■□□□□ 0.17
ATG4D-205ENST00000586477 GALNT3Q14435 633 aa16.1■□□□□ 0.17
ATG4D-205ENST00000586477 TRIP6Q15654 476 aaKnown RBP16.1■□□□□ 0.17
ATG4D-205ENST00000586477 QPCTQ16769 361 aa16.1■□□□□ 0.17
ATG4D-205ENST00000586477 ZNF284Q2VY69 593 aa16.1■□□□□ 0.17
ATG4D-205ENST00000586477 NLRP9Q7RTR0 991 aa16.1■□□□□ 0.17
ATG4D-205ENST00000586477 SLC25A41Q8N5S1 370 aa16.1■□□□□ 0.17
ATG4D-205ENST00000586477 PTCD2Q8WV60 388 aaKnown RBP16.1■□□□□ 0.17
ATG4D-205ENST00000586477 KLK6Q92876 244 aa16.1■□□□□ 0.17
ATG4D-205ENST00000586477 C19orf43Q9BQ61 176 aa16.1■□□□□ 0.17
ATG4D-205ENST00000586477 RHOXF2Q9BQY4 288 aa16.1■□□□□ 0.17
ATG4D-205ENST00000586477 SCNM1Q9BWG6 230 aa16.1■□□□□ 0.17
ATG4D-205ENST00000586477 CAAP1Q9H8G2 361 aa16.1■□□□□ 0.17
ATG4D-205ENST00000586477 CASS4Q9NQ75 786 aa16.1■□□□□ 0.17
ATG4D-205ENST00000586477 AASDHPPTQ9NRN7 309 aa16.1■□□□□ 0.17
ATG4D-205ENST00000586477 RAD18Q9NS91 495 aa16.1■□□□□ 0.17
ATG4D-205ENST00000586477 LRRK1Q38SD2 2015 aa16.1■□□□□ 0.17
ATG4D-205ENST00000586477 FREM2Q5SZK8 3169 aa16.1■□□□□ 0.17
ATG4D-205ENST00000586477 DMXL2Q8TDJ6 3036 aa16.09■□□□□ 0.17
ATG4D-205ENST00000586477 A0A1W2PQU0 124 aa16.09■□□□□ 0.17
ATG4D-205ENST00000586477 MAGEB16A2A368 324 aa16.09■□□□□ 0.17
ATG4D-205ENST00000586477 C2orf81A6NN90 581 aa16.09■□□□□ 0.17
ATG4D-205ENST00000586477 PSMD11O00231 422 aa16.09■□□□□ 0.17
ATG4D-205ENST00000586477 HYAL3O43820 417 aaPredicted RBP16.09■□□□□ 0.17
ATG4D-205ENST00000586477 PCDHGA12O60330 932 aa16.09■□□□□ 0.17
ATG4D-205ENST00000586477 USP12O75317 370 aa16.09■□□□□ 0.17
ATG4D-205ENST00000586477 VIPR1P32241 457 aa16.09■□□□□ 0.17
ATG4D-205ENST00000586477 ABL2P42684 1182 aa16.09■□□□□ 0.17
ATG4D-205ENST00000586477 MRPS25P82663 173 aaKnown RBP16.09■□□□□ 0.17
ATG4D-205ENST00000586477 FGL2Q14314 439 aa16.09■□□□□ 0.17
ATG4D-205ENST00000586477 SPARCL1Q14515 664 aa16.09■□□□□ 0.17
ATG4D-205ENST00000586477 HLTFQ14527 1009 aaKnown RBP eCLIP16.09■□□□□ 0.17
ATG4D-205ENST00000586477 IHHQ14623 411 aa16.09■□□□□ 0.17
ATG4D-205ENST00000586477 HIF1AQ16665 826 aa16.09■□□□□ 0.17
ATG4D-205ENST00000586477 TMEM259Q4ZIN3 620 aa16.09■□□□□ 0.17
ATG4D-205ENST00000586477 ZDHHC20Q5W0Z9 365 aa16.09■□□□□ 0.17
ATG4D-205ENST00000586477 SEL1L3Q68CR1 1132 aa16.09■□□□□ 0.17
ATG4D-205ENST00000586477 KIAA1161Q6NSJ0 714 aa16.09■□□□□ 0.17
ATG4D-205ENST00000586477 UNQ6494/PRO21346Q6UXR6 183 aa16.09■□□□□ 0.17
ATG4D-205ENST00000586477 CENPUQ71F23 418 aa16.09■□□□□ 0.17
ATG4D-205ENST00000586477 DPPA4Q7L190 304 aa16.09■□□□□ 0.17
ATG4D-205ENST00000586477 GLRX5Q86SX6 157 aa16.09■□□□□ 0.17
ATG4D-205ENST00000586477 SLCO6A1Q86UG4 719 aa16.09■□□□□ 0.17
ATG4D-205ENST00000586477 HORMAD1Q86X24 394 aa16.09■□□□□ 0.17
ATG4D-205ENST00000586477 CCNJLQ8IV13 435 aa16.09■□□□□ 0.17
ATG4D-205ENST00000586477 TMEM145Q8NBT3 493 aa16.09■□□□□ 0.17
ATG4D-205ENST00000586477 PPHLN1Q8NEY8 458 aaKnown RBP16.09■□□□□ 0.17
ATG4D-205ENST00000586477 BRSK1Q8TDC3 778 aa16.09■□□□□ 0.17
ATG4D-205ENST00000586477 CXorf40AQ8TE69 158 aa16.09■□□□□ 0.17
ATG4D-205ENST00000586477 PEX13Q92968 403 aa16.09■□□□□ 0.17
ATG4D-205ENST00000586477 ART4Q93070 314 aa16.09■□□□□ 0.17
ATG4D-205ENST00000586477 LRRC39Q96DD0 335 aa16.09■□□□□ 0.17
ATG4D-205ENST00000586477 NSMCE3Q96MG7 304 aa16.09■□□□□ 0.17
ATG4D-205ENST00000586477 SERPINB12Q96P63 405 aa16.09■□□□□ 0.17
ATG4D-205ENST00000586477 NAT9Q9BTE0 207 aa16.09■□□□□ 0.17
ATG4D-205ENST00000586477 PCDH12Q9NPG4 1184 aa16.09■□□□□ 0.17
ATG4D-205ENST00000586477 TOR4AQ9NXH8 423 aa16.09■□□□□ 0.17
ATG4D-205ENST00000586477 SAMD15Q9P1V8 674 aa16.09■□□□□ 0.17
ATG4D-205ENST00000586477 DMGDHQ9UI17 866 aaKnown RBP16.09■□□□□ 0.17
ATG4D-205ENST00000586477 TDRD6O60522 2096 aaKnown RBP16.08■□□□□ 0.16
ATG4D-205ENST00000586477 HEATR9A2RTY3 570 aa16.08■□□□□ 0.16
ATG4D-205ENST00000586477 SDR42E2A6NKP2 422 aa16.08■□□□□ 0.16
ATG4D-205ENST00000586477 C1QTNF9BB2RNN3 333 aa16.08■□□□□ 0.16
ATG4D-205ENST00000586477 TLR4O00206 839 aa16.08■□□□□ 0.16
ATG4D-205ENST00000586477 AREL1O15033 823 aa16.08■□□□□ 0.16
ATG4D-205ENST00000586477 EIF3HO15372 352 aaKnown RBP eCLIP16.08■□□□□ 0.16
ATG4D-205ENST00000586477 TMEM63AO94886 807 aa16.08■□□□□ 0.16
ATG4D-205ENST00000586477 C1QTNF9P0C862 333 aa16.08■□□□□ 0.16
ATG4D-205ENST00000586477 NUDT1P36639 197 aa16.08■□□□□ 0.16
ATG4D-205ENST00000586477 MMP12P39900 470 aa16.08■□□□□ 0.16
ATG4D-205ENST00000586477 CCT8P50990 548 aa16.08■□□□□ 0.16
ATG4D-205ENST00000586477 TERF1P54274 439 aa16.08■□□□□ 0.16
ATG4D-205ENST00000586477 PLTPP55058 493 aa16.08■□□□□ 0.16
ATG4D-205ENST00000586477 C21orf59P57076 290 aa16.08■□□□□ 0.16
ATG4D-205ENST00000586477 TMEM52BQ4KMG9 183 aa16.08■□□□□ 0.16
ATG4D-205ENST00000586477 KANSL1Q7Z3B3 1105 aa16.08■□□□□ 0.16
ATG4D-205ENST00000586477 GLT6D1Q7Z4J2 308 aa16.08■□□□□ 0.16
ATG4D-205ENST00000586477 PNPLA1Q8N8W4 532 aa16.08■□□□□ 0.16
ATG4D-205ENST00000586477 MFSD2AQ8NA29 543 aa16.08■□□□□ 0.16
ATG4D-205ENST00000586477 OR52K1Q8NGK4 314 aa16.08■□□□□ 0.16
ATG4D-205ENST00000586477 SETD7Q8WTS6 366 aaKnown RBP16.08■□□□□ 0.16
ATG4D-205ENST00000586477 RANBP9Q96S59 729 aa16.08■□□□□ 0.16
ATG4D-205ENST00000586477 ELF4Q99607 663 aaPredicted RBP16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms