RNA–Protein interactions for RNA: ENST00000586417.5

ATG4D-204, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 2

Gene ATG4D, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-204ENST00000586417 RALGPS2Q86X27 583 aaPredicted RBP20.41■□□□□ 0.86
ATG4D-204ENST00000586417 NUDCD3Q8IVD9 361 aa20.41■□□□□ 0.86
ATG4D-204ENST00000586417 CENPLQ8N0S6 344 aaPredicted RBP20.41■□□□□ 0.86
ATG4D-204ENST00000586417 RYBPQ8N488 228 aaPredicted RBP20.41■□□□□ 0.86
ATG4D-204ENST00000586417 NECAB3Q96P71 396 aaPredicted RBP20.41■□□□□ 0.86
ATG4D-204ENST00000586417 TUBGCP5Q96RT8 1024 aa20.41■□□□□ 0.86
ATG4D-204ENST00000586417 NDNQ99608 321 aa20.41■□□□□ 0.86
ATG4D-204ENST00000586417 OLFM1Q99784 485 aa20.41■□□□□ 0.86
ATG4D-204ENST00000586417 ZDHHC4Q9NPG8 344 aa20.41■□□□□ 0.86
ATG4D-204ENST00000586417 TLK1Q9UKI8 766 aa20.41■□□□□ 0.86
ATG4D-204ENST00000586417 HCN2Q9UL51 889 aa20.41■□□□□ 0.86
ATG4D-204ENST00000586417 ERVW-1Q9UQF0 538 aa20.41■□□□□ 0.86
ATG4D-204ENST00000586417 PALM2-AKAP2B1ALY0 433 aaPredicted RBP20.4■□□□□ 0.86
ATG4D-204ENST00000586417 IL1BP01584 269 aa20.4■□□□□ 0.86
ATG4D-204ENST00000586417 CRABP2P29373 138 aa20.4■□□□□ 0.86
ATG4D-204ENST00000586417 GRIA2P42262 883 aa20.4■□□□□ 0.86
ATG4D-204ENST00000586417 CCNHP51946 323 aaPredicted RBP20.4■□□□□ 0.86
ATG4D-204ENST00000586417 PTPRNQ16849 979 aa20.4■□□□□ 0.86
ATG4D-204ENST00000586417 CARD16Q5EG05 197 aa20.4■□□□□ 0.86
ATG4D-204ENST00000586417 DPY19L3Q6ZPD9 716 aa20.4■□□□□ 0.86
ATG4D-204ENST00000586417 LCA5Q86VQ0 697 aa20.4■□□□□ 0.86
ATG4D-204ENST00000586417 SPATS2Q86XZ4 545 aaKnown RBP20.4■□□□□ 0.86
ATG4D-204ENST00000586417 TRIM42Q8IWZ5 723 aa20.4■□□□□ 0.86
ATG4D-204ENST00000586417 RAB3IL1Q8TBN0 382 aa20.4■□□□□ 0.86
ATG4D-204ENST00000586417 WFIKKN2Q8TEU8 576 aa20.4■□□□□ 0.86
ATG4D-204ENST00000586417 ECHDC3Q96DC8 303 aa20.4■□□□□ 0.86
ATG4D-204ENST00000586417 CPEB1Q9BZB8 566 aaKnown RBP20.4■□□□□ 0.86
ATG4D-204ENST00000586417 C8orf33Q9H7E9 229 aaPredicted RBP20.4■□□□□ 0.86
ATG4D-204ENST00000586417 IL17CQ9P0M4 197 aa20.4■□□□□ 0.86
ATG4D-204ENST00000586417 FKBPLQ9UIM3 349 aa20.4■□□□□ 0.86
ATG4D-204ENST00000586417 H7C0S8 307 aa20.39■□□□□ 0.86
ATG4D-204ENST00000586417 ALDH3A1P30838 453 aa20.39■□□□□ 0.86
ATG4D-204ENST00000586417 STC1P52823 247 aa20.39■□□□□ 0.86
ATG4D-204ENST00000586417 CHI3L2Q15782 390 aa20.39■□□□□ 0.86
ATG4D-204ENST00000586417 CDKN3Q16667 212 aa20.39■□□□□ 0.86
ATG4D-204ENST00000586417 ACCSLQ4AC99 568 aa20.39■□□□□ 0.86
ATG4D-204ENST00000586417 GLIPR1L2Q4G1C9 344 aa20.39■□□□□ 0.86
ATG4D-204ENST00000586417 FASTKD1Q53R41 847 aaKnown RBP20.39■□□□□ 0.86
ATG4D-204ENST00000586417 Q6ZVU0 165 aa20.39■□□□□ 0.86
ATG4D-204ENST00000586417 LYSMD3Q7Z3D4 306 aa20.39■□□□□ 0.86
ATG4D-204ENST00000586417 CCDC63Q8NA47 563 aa20.39■□□□□ 0.86
ATG4D-204ENST00000586417 COPG2Q9UBF2 871 aa20.39■□□□□ 0.86
ATG4D-204ENST00000586417 ACOT9Q9Y305 439 aa20.39■□□□□ 0.86
ATG4D-204ENST00000586417 STX7O15400 261 aaKnown RBP20.39■□□□□ 0.85
ATG4D-204ENST00000586417 APODP05090 189 aa20.39■□□□□ 0.85
ATG4D-204ENST00000586417 DLDP09622 509 aaKnown RBP20.39■□□□□ 0.85
ATG4D-204ENST00000586417 NEFHP12036 1026 aa20.39■□□□□ 0.85
ATG4D-204ENST00000586417 COL6A2P12110 1019 aa20.39■□□□□ 0.85
ATG4D-204ENST00000586417 HMGCLP35914 325 aa20.39■□□□□ 0.85
ATG4D-204ENST00000586417 BST1Q10588 318 aa20.39■□□□□ 0.85
ATG4D-204ENST00000586417 PEX6Q13608 980 aa20.39■□□□□ 0.85
ATG4D-204ENST00000586417 HECTD2Q5U5R9 776 aa20.39■□□□□ 0.85
ATG4D-204ENST00000586417 ZNF549Q6P9A3 640 aa20.39■□□□□ 0.85
ATG4D-204ENST00000586417 TPRG1Q6ZUI0 275 aa20.39■□□□□ 0.85
ATG4D-204ENST00000586417 PLPP6Q8IY26 295 aa20.39■□□□□ 0.85
ATG4D-204ENST00000586417 TMEM151AQ8N4L1 468 aa20.39■□□□□ 0.85
ATG4D-204ENST00000586417 FRS2Q8WU20 508 aa20.39■□□□□ 0.85
ATG4D-204ENST00000586417 KCTD4Q8WVF5 259 aa20.39■□□□□ 0.85
ATG4D-204ENST00000586417 GPR78Q96P69 363 aa20.39■□□□□ 0.85
ATG4D-204ENST00000586417 TSSK1BQ9BXA7 367 aa20.39■□□□□ 0.85
ATG4D-204ENST00000586417 BPIFA1Q9NP55 256 aa20.39■□□□□ 0.85
ATG4D-204ENST00000586417 CA14Q9ULX7 337 aa20.39■□□□□ 0.85
ATG4D-204ENST00000586417 CAPN8A6NHC0 703 aa20.38■□□□□ 0.85
ATG4D-204ENST00000586417 WASH3PC4AMC7 463 aa20.38■□□□□ 0.85
ATG4D-204ENST00000586417 K7EQS6 105 aa20.38■□□□□ 0.85
ATG4D-204ENST00000586417 WISP3O95389 354 aaPredicted RBP20.38■□□□□ 0.85
ATG4D-204ENST00000586417 POP4O95707 220 aaKnown RBP20.38■□□□□ 0.85
ATG4D-204ENST00000586417 VASPP50552 380 aaPredicted RBP20.38■□□□□ 0.85
ATG4D-204ENST00000586417 ILF2Q12905 390 aaKnown RBP20.38■□□□□ 0.85
ATG4D-204ENST00000586417 DLG1Q12959 904 aa20.38■□□□□ 0.85
ATG4D-204ENST00000586417 SDCCAG8Q86SQ7 713 aaPredicted RBP20.38■□□□□ 0.85
ATG4D-204ENST00000586417 GJD3Q8N144 294 aa20.38■□□□□ 0.85
ATG4D-204ENST00000586417 CHST14Q8NCH0 376 aa20.38■□□□□ 0.85
ATG4D-204ENST00000586417 OR2A12Q8NGT7 310 aa20.38■□□□□ 0.85
ATG4D-204ENST00000586417 SCG3Q8WXD2 468 aaKnown RBP20.38■□□□□ 0.85
ATG4D-204ENST00000586417 GPR63Q9BZJ6 419 aa20.38■□□□□ 0.85
ATG4D-204ENST00000586417 SUV39H2Q9H5I1 410 aa20.38■□□□□ 0.85
ATG4D-204ENST00000586417 NMRAL1Q9HBL8 299 aa20.38■□□□□ 0.85
ATG4D-204ENST00000586417 INTS10Q9NVR2 710 aaKnown RBP20.38■□□□□ 0.85
ATG4D-204ENST00000586417 CORO1CQ9ULV4 474 aaPredicted RBP20.38■□□□□ 0.85
ATG4D-204ENST00000586417 SCN8AQ9UQD0 1980 aa20.38■□□□□ 0.85
ATG4D-204ENST00000586417 MUC22E2RYF6 1773 aaPredicted RBP20.38■□□□□ 0.85
ATG4D-204ENST00000586417 NCOR1O75376 2440 aa20.38■□□□□ 0.85
ATG4D-204ENST00000586417 G3V2L1 256 aa20.37■□□□□ 0.85
ATG4D-204ENST00000586417 BNIP3LO60238 219 aa20.37■□□□□ 0.85
ATG4D-204ENST00000586417 EGFP01133 1207 aa20.37■□□□□ 0.85
ATG4D-204ENST00000586417 ATP5BP06576 529 aaKnown RBP20.37■□□□□ 0.85
ATG4D-204ENST00000586417 FGF3P11487 239 aaPredicted RBP20.37■□□□□ 0.85
ATG4D-204ENST00000586417 KCNA4P22459 653 aa20.37■□□□□ 0.85
ATG4D-204ENST00000586417 MC4RP32245 332 aa20.37■□□□□ 0.85
ATG4D-204ENST00000586417 HNF1BP35680 557 aa20.37■□□□□ 0.85
ATG4D-204ENST00000586417 CDKN2DP55273 166 aa20.37■□□□□ 0.85
ATG4D-204ENST00000586417 XIAPP98170 497 aa20.37■□□□□ 0.85
ATG4D-204ENST00000586417 TMEM196Q5HYL7 178 aa20.37■□□□□ 0.85
ATG4D-204ENST00000586417 SPNS2Q8IVW8 549 aa20.37■□□□□ 0.85
ATG4D-204ENST00000586417 ZNF366Q8N895 744 aa20.37■□□□□ 0.85
ATG4D-204ENST00000586417 ANKS4BQ8N8V4 417 aa20.37■□□□□ 0.85
ATG4D-204ENST00000586417 LYSMD1Q96S90 227 aa20.37■□□□□ 0.85
ATG4D-204ENST00000586417 ACOX2Q99424 681 aa20.37■□□□□ 0.85
ATG4D-204ENST00000586417 MTG2Q9H4K7 406 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms