RNA–Protein interactions for RNA: ENST00000584773.5

SRSF1-208, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5 BASIC

Gene SRSF1, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-208ENST00000584773 B3GNT8Q7Z7M8 397 aa17.96■□□□□ 0.46
SRSF1-208ENST00000584773 Q8N9G6 341 aaPredicted RBP17.96■□□□□ 0.46
SRSF1-208ENST00000584773 HAUS1Q96CS2 278 aa17.96■□□□□ 0.46
SRSF1-208ENST00000584773 NAF1Q96HR8 494 aaKnown RBP17.96■□□□□ 0.46
SRSF1-208ENST00000584773 WDR24Q96S15 920 aa17.96■□□□□ 0.46
SRSF1-208ENST00000584773 RIOK2Q9BVS4 552 aaKnown RBP17.96■□□□□ 0.46
SRSF1-208ENST00000584773 DPEP2Q9H4A9 486 aa17.96■□□□□ 0.46
SRSF1-208ENST00000584773 DDX56Q9NY93 547 aaKnown RBP17.96■□□□□ 0.46
SRSF1-208ENST00000584773 PCYT1BQ9Y5K3 369 aaPredicted RBP17.96■□□□□ 0.46
SRSF1-208ENST00000584773 UNC13CQ8NB66 2214 aa17.95■□□□□ 0.46
SRSF1-208ENST00000584773 A0A1W2PQM1 296 aa17.95■□□□□ 0.46
SRSF1-208ENST00000584773 AGRPO00253 132 aa17.95■□□□□ 0.46
SRSF1-208ENST00000584773 NTN3O00634 580 aaPredicted RBP17.95■□□□□ 0.46
SRSF1-208ENST00000584773 LCA5LO95447 670 aa17.95■□□□□ 0.46
SRSF1-208ENST00000584773 RPLP0P05388 317 aaKnown RBP17.95■□□□□ 0.46
SRSF1-208ENST00000584773 CES1P23141 567 aa17.95■□□□□ 0.46
SRSF1-208ENST00000584773 DPTQ07507 201 aa17.95■□□□□ 0.46
SRSF1-208ENST00000584773 CCDC173Q0VFZ6 552 aa17.95■□□□□ 0.46
SRSF1-208ENST00000584773 SPIDRQ14159 915 aa17.95■□□□□ 0.46
SRSF1-208ENST00000584773 PDK1Q15118 436 aa17.95■□□□□ 0.46
SRSF1-208ENST00000584773 PCSK7Q16549 785 aa17.95■□□□□ 0.46
SRSF1-208ENST00000584773 FOXR1Q6PIV2 292 aa17.95■□□□□ 0.46
SRSF1-208ENST00000584773 OGFOD3Q6PK18 319 aa17.95■□□□□ 0.46
SRSF1-208ENST00000584773 SPOCD1Q6ZMY3 1216 aa17.95■□□□□ 0.46
SRSF1-208ENST00000584773 MARK2Q7KZI7 788 aaKnown RBP17.95■□□□□ 0.46
SRSF1-208ENST00000584773 PDZD3Q86UT5 571 aa17.95■□□□□ 0.46
SRSF1-208ENST00000584773 VSIG1Q86XK7 387 aa17.95■□□□□ 0.46
SRSF1-208ENST00000584773 NDUFAF2Q8N183 169 aa17.95■□□□□ 0.46
SRSF1-208ENST00000584773 SPATA22Q8NHS9 363 aa17.95■□□□□ 0.46
SRSF1-208ENST00000584773 PATE1Q8WXA2 126 aa17.95■□□□□ 0.46
SRSF1-208ENST00000584773 KRT35Q92764 455 aa17.95■□□□□ 0.46
SRSF1-208ENST00000584773 SLC17A4Q9Y2C5 497 aa17.95■□□□□ 0.46
SRSF1-208ENST00000584773 RNF215Q9Y6U7 377 aa17.95■□□□□ 0.46
SRSF1-208ENST00000584773 CACNA1GO43497 2377 aa17.95■□□□□ 0.46
SRSF1-208ENST00000584773 ZFC3H1O60293 1989 aaKnown RBP17.94■□□□□ 0.46
SRSF1-208ENST00000584773 C1orf232A0A0U1RR37 186 aa17.94■□□□□ 0.46
SRSF1-208ENST00000584773 F5H423 210 aaPredicted RBP17.94■□□□□ 0.46
SRSF1-208ENST00000584773 PDE2AO00408 941 aaPredicted RBP17.94■□□□□ 0.46
SRSF1-208ENST00000584773 PPP1R12AO14974 1030 aaPredicted RBP17.94■□□□□ 0.46
SRSF1-208ENST00000584773 PSTPIP1O43586 416 aa17.94■□□□□ 0.46
SRSF1-208ENST00000584773 CST8O60676 142 aa17.94■□□□□ 0.46
SRSF1-208ENST00000584773 SLC4A1P02730 911 aa17.94■□□□□ 0.46
SRSF1-208ENST00000584773 ZNF30P17039 623 aa17.94■□□□□ 0.46
SRSF1-208ENST00000584773 CA4P22748 312 aa17.94■□□□□ 0.46
SRSF1-208ENST00000584773 HADHBP55084 474 aaKnown RBP17.94■□□□□ 0.46
SRSF1-208ENST00000584773 TAZQ16635 292 aa17.94■□□□□ 0.46
SRSF1-208ENST00000584773 C14orf28Q4W4Y0 310 aa17.94■□□□□ 0.46
SRSF1-208ENST00000584773 SLC30A9Q6PML9 568 aa17.94■□□□□ 0.46
SRSF1-208ENST00000584773 ADAMTSL4Q6UY14 1074 aa17.94■□□□□ 0.46
SRSF1-208ENST00000584773 LYSMD3Q7Z3D4 306 aa17.94■□□□□ 0.46
SRSF1-208ENST00000584773 SNIP1Q8TAD8 396 aaKnown RBP17.94■□□□□ 0.46
SRSF1-208ENST00000584773 GPBAR1Q8TDU6 330 aa17.94■□□□□ 0.46
SRSF1-208ENST00000584773 FGF11Q92914 225 aa17.94■□□□□ 0.46
SRSF1-208ENST00000584773 EID2BQ96D98 161 aa17.94■□□□□ 0.46
SRSF1-208ENST00000584773 IMP4Q96G21 291 aaKnown RBP17.94■□□□□ 0.46
SRSF1-208ENST00000584773 PRR11Q96HE9 360 aaPredicted RBP17.94■□□□□ 0.46
SRSF1-208ENST00000584773 TRIB3Q96RU7 358 aa17.94■□□□□ 0.46
SRSF1-208ENST00000584773 FOXP3Q9BZS1 431 aa17.94■□□□□ 0.46
SRSF1-208ENST00000584773 POLR1BQ9H9Y6 1135 aa17.94■□□□□ 0.46
SRSF1-208ENST00000584773 HAUS2Q9NVX0 235 aa17.94■□□□□ 0.46
SRSF1-208ENST00000584773 KCTD5Q9NXV2 234 aa17.94■□□□□ 0.46
SRSF1-208ENST00000584773 ATXN7L1Q9ULK2 861 aaPredicted RBP17.94■□□□□ 0.46
SRSF1-208ENST00000584773 OAS3Q9Y6K5 1087 aaKnown RBP17.94■□□□□ 0.46
SRSF1-208ENST00000584773 FADS2P1A8MWK0 482 aa17.93■□□□□ 0.46
SRSF1-208ENST00000584773 ANKRD66B4E2M5 251 aa17.93■□□□□ 0.46
SRSF1-208ENST00000584773 TCEA3O75764 348 aa17.93■□□□□ 0.46
SRSF1-208ENST00000584773 MT-CYBP00156 380 aaPredicted RBP17.93■□□□□ 0.46
SRSF1-208ENST00000584773 ZFXP17010 805 aaPredicted RBP17.93■□□□□ 0.46
SRSF1-208ENST00000584773 PTPN3P26045 913 aa17.93■□□□□ 0.46
SRSF1-208ENST00000584773 TEAD1P28347 426 aa17.93■□□□□ 0.46
SRSF1-208ENST00000584773 ACTN2P35609 894 aa17.93■□□□□ 0.46
SRSF1-208ENST00000584773 ADCY8P40145 1251 aa17.93■□□□□ 0.46
SRSF1-208ENST00000584773 ABCG1P45844 678 aa17.93■□□□□ 0.46
SRSF1-208ENST00000584773 LSSP48449 732 aa17.93■□□□□ 0.46
SRSF1-208ENST00000584773 CTBSQ01459 385 aa17.93■□□□□ 0.46
SRSF1-208ENST00000584773 HLTFQ14527 1009 aaKnown RBP eCLIP17.93■□□□□ 0.46
SRSF1-208ENST00000584773 PRKD1Q15139 912 aaPredicted RBP17.93■□□□□ 0.46
SRSF1-208ENST00000584773 CERCAMQ5T4B2 595 aa17.93■□□□□ 0.46
SRSF1-208ENST00000584773 LYSMD1Q96S90 227 aa17.93■□□□□ 0.46
SRSF1-208ENST00000584773 MLPHQ9BV36 600 aaPredicted RBP17.93■□□□□ 0.46
SRSF1-208ENST00000584773 ASCL3Q9NQ33 180 aa17.93■□□□□ 0.46
SRSF1-208ENST00000584773 UBP1Q9NZI7 540 aa17.93■□□□□ 0.46
SRSF1-208ENST00000584773 TAAR2Q9P1P5 351 aa17.93■□□□□ 0.46
SRSF1-208ENST00000584773 REXO2Q9Y3B8 237 aaKnown RBP17.93■□□□□ 0.46
SRSF1-208ENST00000584773 PRKAB1Q9Y478 270 aa17.93■□□□□ 0.46
SRSF1-208ENST00000584773 DUSP10Q9Y6W6 482 aa17.93■□□□□ 0.46
SRSF1-208ENST00000584773 PTPRQQ9UMZ3 2332 aa17.92■□□□□ 0.46
SRSF1-208ENST00000584773 hCG_1818297A0A087WSY0 165 aa17.92■□□□□ 0.46
SRSF1-208ENST00000584773 D6RAR5 112 aa17.92■□□□□ 0.46
SRSF1-208ENST00000584773 ATP1A1P05023 1023 aaKnown RBP17.92■□□□□ 0.46
SRSF1-208ENST00000584773 FGF1P05230 155 aa17.92■□□□□ 0.46
SRSF1-208ENST00000584773 IVLP07476 585 aa17.92■□□□□ 0.46
SRSF1-208ENST00000584773 CD68P34810 354 aaPredicted RBP17.92■□□□□ 0.46
SRSF1-208ENST00000584773 CYLC1P35663 651 aaPredicted RBP17.92■□□□□ 0.46
SRSF1-208ENST00000584773 SPINT3P49223 89 aa17.92■□□□□ 0.46
SRSF1-208ENST00000584773 RPL26P61254 145 aaKnown RBP17.92■□□□□ 0.46
SRSF1-208ENST00000584773 NOMO1Q15155 1222 aa17.92■□□□□ 0.46
SRSF1-208ENST00000584773 SPA17Q15506 151 aa17.92■□□□□ 0.46
SRSF1-208ENST00000584773 RAD9BQ6WBX8 426 aa17.92■□□□□ 0.46
SRSF1-208ENST00000584773 ZNF765Q7L2R6 523 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms