RNA–Protein interactions for RNA: ENST00000584754.1

PPP4R1-229, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 5

Gene PPP4R1, Length 509 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-229	ENST00000584754	PTGR1	Q14914	329 aa		3.77	□□□□□ -1.81
PPP4R1-229	ENST00000584754	RNPS1	Q15287	305 aa	Known RBP	3.77	□□□□□ -1.81
PPP4R1-229	ENST00000584754	ADIPOQ	Q15848	244 aa		3.77	□□□□□ -1.81
PPP4R1-229	ENST00000584754	SYTL3	Q4VX76	610 aa		3.77	□□□□□ -1.81
PPP4R1-229	ENST00000584754	PIK3CD-AS1	Q5SR53	167 aa		3.77	□□□□□ -1.81
PPP4R1-229	ENST00000584754	C6orf141	Q5SZD1	244 aa		3.77	□□□□□ -1.81
PPP4R1-229	ENST00000584754	GPATCH4	Q5T3I0	446 aa	Known RBP	3.77	□□□□□ -1.81
PPP4R1-229	ENST00000584754	FAM205BP	Q63HN1	556 aa		3.77	□□□□□ -1.81
PPP4R1-229	ENST00000584754	HEPHL1	Q6MZM0	1159 aa		3.77	□□□□□ -1.81
PPP4R1-229	ENST00000584754	KRT74	Q7RTS7	529 aa		3.77	□□□□□ -1.81
PPP4R1-229	ENST00000584754	PALB2	Q86YC2	1186 aa		3.77	□□□□□ -1.81
PPP4R1-229	ENST00000584754	EPHX4	Q8IUS5	362 aa		3.77	□□□□□ -1.81
PPP4R1-229	ENST00000584754	PELI3	Q8N2H9	469 aa		3.77	□□□□□ -1.81
PPP4R1-229	ENST00000584754	SLC35F5	Q8WV83	523 aa		3.77	□□□□□ -1.81
PPP4R1-229	ENST00000584754	GTF3C6	Q969F1	213 aa		3.77	□□□□□ -1.81
PPP4R1-229	ENST00000584754	JAKMIP2	Q96AA8	810 aa		3.77	□□□□□ -1.81
PPP4R1-229	ENST00000584754	FBXL8	Q96CD0	374 aa		3.77	□□□□□ -1.81
PPP4R1-229	ENST00000584754	FAM120B	Q96EK7	910 aa	Known RBP	3.77	□□□□□ -1.81
PPP4R1-229	ENST00000584754	SLITRK1	Q96PX8	696 aa		3.77	□□□□□ -1.81
PPP4R1-229	ENST00000584754	BBS4	Q96RK4	519 aa		3.77	□□□□□ -1.81
PPP4R1-229	ENST00000584754	TEX12	Q9BXU0	123 aa		3.77	□□□□□ -1.81
PPP4R1-229	ENST00000584754	TTYH1	Q9H313	450 aa	Predicted RBP	3.77	□□□□□ -1.81
PPP4R1-229	ENST00000584754	ZNF304	Q9HCX3	659 aa		3.77	□□□□□ -1.81
PPP4R1-229	ENST00000584754	BPIFA1	Q9NP55	256 aa		3.77	□□□□□ -1.81
PPP4R1-229	ENST00000584754	SEPT11	Q9NVA2	429 aa	Known RBP	3.77	□□□□□ -1.81
PPP4R1-229	ENST00000584754	WWOX	Q9NZC7	414 aa		3.77	□□□□□ -1.81
PPP4R1-229	ENST00000584754	NLK	Q9UBE8	527 aa		3.77	□□□□□ -1.81
PPP4R1-229	ENST00000584754	POLG2	Q9UHN1	485 aa		3.77	□□□□□ -1.81
PPP4R1-229	ENST00000584754	PCDHA12	Q9UN75	941 aa		3.77	□□□□□ -1.81
PPP4R1-229	ENST00000584754	SLC45A1	Q9Y2W3	748 aa		3.77	□□□□□ -1.81
PPP4R1-229	ENST00000584754	PIAS3	Q9Y6X2	628 aa		3.77	□□□□□ -1.81
PPP4R1-229	ENST00000584754	LMO7	Q8WWI1	1683 aa		3.77	□□□□□ -1.81
PPP4R1-229	ENST00000584754	SPATA31E1	Q6ZUB1	1445 aa		3.77	□□□□□ -1.81
PPP4R1-229	ENST00000584754	ANKAR	Q7Z5J8	1434 aa		3.77	□□□□□ -1.81
PPP4R1-229	ENST00000584754	MAP3K5	Q99683	1374 aa		3.76	□□□□□ -1.81
PPP4R1-229	ENST00000584754	TARSL2	A2RTX5	802 aa	Known RBP	3.76	□□□□□ -1.81
PPP4R1-229	ENST00000584754	CBY3	A6NI87	242 aa		3.76	□□□□□ -1.81
PPP4R1-229	ENST00000584754	PTGES3L	E9PB15	166 aa		3.76	□□□□□ -1.81
PPP4R1-229	ENST00000584754	MDM4	O15151	490 aa		3.76	□□□□□ -1.81
PPP4R1-229	ENST00000584754	SEC14L5	O43304	696 aa		3.76	□□□□□ -1.81
PPP4R1-229	ENST00000584754	TMCC2	O75069	709 aa		3.76	□□□□□ -1.81
PPP4R1-229	ENST00000584754	ATG13	O75143	517 aa		3.76	□□□□□ -1.81
PPP4R1-229	ENST00000584754	GFPT2	O94808	682 aa		3.76	□□□□□ -1.81
PPP4R1-229	ENST00000584754	NDUFB4	O95168	129 aa		3.76	□□□□□ -1.81
PPP4R1-229	ENST00000584754	EPN2	O95208	641 aa		3.76	□□□□□ -1.81
PPP4R1-229	ENST00000584754	CSH1	P0DML2	217 aa		3.76	□□□□□ -1.81
PPP4R1-229	ENST00000584754	CSH2	P0DML3	217 aa		3.76	□□□□□ -1.81
PPP4R1-229	ENST00000584754	KRT10	P13645	584 aa		3.76	□□□□□ -1.81
PPP4R1-229	ENST00000584754	SAT1	P21673	171 aa		3.76	□□□□□ -1.81
PPP4R1-229	ENST00000584754	HOXA13	P31271	388 aa	Predicted RBP	3.76	□□□□□ -1.81
PPP4R1-229	ENST00000584754	TTK	P33981	857 aa		3.76	□□□□□ -1.81
PPP4R1-229	ENST00000584754	RYK	P34925	604 aa		3.76	□□□□□ -1.81
PPP4R1-229	ENST00000584754	CDKN2A	P42771	156 aa	Known RBP	3.76	□□□□□ -1.81
PPP4R1-229	ENST00000584754	HTR6	P50406	440 aa		3.76	□□□□□ -1.81
PPP4R1-229	ENST00000584754	PGGT1B	P53609	377 aa		3.76	□□□□□ -1.81
PPP4R1-229	ENST00000584754	MC1R	Q01726	317 aa		3.76	□□□□□ -1.81
PPP4R1-229	ENST00000584754	DRAP1	Q14919	205 aa	Predicted RBP	3.76	□□□□□ -1.81
PPP4R1-229	ENST00000584754	USP41	Q3LFD5	358 aa		3.76	□□□□□ -1.81
PPP4R1-229	ENST00000584754	ENTPD8	Q5MY95	495 aa		3.76	□□□□□ -1.81
PPP4R1-229	ENST00000584754	TSSK4	Q6SA08	328 aa		3.76	□□□□□ -1.81
PPP4R1-229	ENST00000584754	KIAA2013	Q8IYS2	634 aa		3.76	□□□□□ -1.81
PPP4R1-229	ENST00000584754	RBFA	Q8N0V3	343 aa		3.76	□□□□□ -1.81
PPP4R1-229	ENST00000584754	ZCCHC9	Q8N567	271 aa	Known RBP	3.76	□□□□□ -1.81
PPP4R1-229	ENST00000584754	TTC39C	Q8N584	583 aa		3.76	□□□□□ -1.81
PPP4R1-229	ENST00000584754	BEST2	Q8NFU1	509 aa		3.76	□□□□□ -1.81
PPP4R1-229	ENST00000584754	NTPCR	Q9BSD7	190 aa	Known RBP	3.76	□□□□□ -1.81
PPP4R1-229	ENST00000584754	TMEM204	Q9BSN7	226 aa		3.76	□□□□□ -1.81
PPP4R1-229	ENST00000584754	SF3B5	Q9BWJ5	86 aa	Known RBP	3.76	□□□□□ -1.81
PPP4R1-229	ENST00000584754	ITPA	Q9BY32	194 aa		3.76	□□□□□ -1.81
PPP4R1-229	ENST00000584754	B3GNT4	Q9C0J1	378 aa		3.76	□□□□□ -1.81
PPP4R1-229	ENST00000584754	RBM38	Q9H0Z9	239 aa	Known RBP	3.76	□□□□□ -1.81
PPP4R1-229	ENST00000584754	GHITM	Q9H3K2	345 aa		3.76	□□□□□ -1.81
PPP4R1-229	ENST00000584754	CXorf56	Q9H5V9	222 aa		3.76	□□□□□ -1.81
PPP4R1-229	ENST00000584754	SPAG4	Q9NPE6	437 aa		3.76	□□□□□ -1.81
PPP4R1-229	ENST00000584754	HIF1AN	Q9NWT6	349 aa		3.76	□□□□□ -1.81
PPP4R1-229	ENST00000584754	UBA2	Q9UBT2	640 aa	Predicted RBP	3.76	□□□□□ -1.81
PPP4R1-229	ENST00000584754	NDRG3	Q9UGV2	375 aa		3.76	□□□□□ -1.81
PPP4R1-229	ENST00000584754	PAM16	Q9Y3D7	125 aa		3.76	□□□□□ -1.81
PPP4R1-229	ENST00000584754	SRPRB	Q9Y5M8	271 aa	Known RBP	3.76	□□□□□ -1.81
PPP4R1-229	ENST00000584754	SNX8	Q9Y5X2	465 aa		3.76	□□□□□ -1.81
PPP4R1-229	ENST00000584754	WNK3	Q9BYP7	1800 aa		3.76	□□□□□ -1.81
PPP4R1-229	ENST00000584754	LRRC37A3	O60309	1634 aa		3.76	□□□□□ -1.81
PPP4R1-229	ENST00000584754	AKAP12	Q02952	1782 aa		3.76	□□□□□ -1.81
PPP4R1-229	ENST00000584754		A0A0C4DFX4	3053 aa		3.76	□□□□□ -1.81
PPP4R1-229	ENST00000584754	GPRASP1	Q5JY77	1395 aa		3.76	□□□□□ -1.81
PPP4R1-229	ENST00000584754	DHX57	Q6P158	1386 aa	Known RBP	3.76	□□□□□ -1.81
PPP4R1-229	ENST00000584754	COL24A1	Q17RW2	1714 aa		3.75	□□□□□ -1.81
PPP4R1-229	ENST00000584754	TNRC18	O15417	2968 aa	Predicted RBP	3.75	□□□□□ -1.81
PPP4R1-229	ENST00000584754	ATP7B	P35670	1465 aa		3.75	□□□□□ -1.81
PPP4R1-229	ENST00000584754	FAM237B	A0A1B0GVD1	139 aa		3.75	□□□□□ -1.81
PPP4R1-229	ENST00000584754	DYTN	A2CJ06	578 aa		3.75	□□□□□ -1.81
PPP4R1-229	ENST00000584754	CDRT15L2	A8MXV6	281 aa		3.75	□□□□□ -1.81
PPP4R1-229	ENST00000584754	AKR1B15	C9JRZ8	316 aa	Predicted RBP	3.75	□□□□□ -1.81
PPP4R1-229	ENST00000584754	HSPB6	O14558	160 aa		3.75	□□□□□ -1.81
PPP4R1-229	ENST00000584754	HCRTR2	O43614	444 aa		3.75	□□□□□ -1.81
PPP4R1-229	ENST00000584754	DOK2	O60496	412 aa		3.75	□□□□□ -1.81
PPP4R1-229	ENST00000584754	TOMM40	O96008	361 aa		3.75	□□□□□ -1.81
PPP4R1-229	ENST00000584754	IFNA2	P01563	188 aa		3.75	□□□□□ -1.81
PPP4R1-229	ENST00000584754	TGFB3	P10600	412 aa		3.75	□□□□□ -1.81
PPP4R1-229	ENST00000584754	TFPI	P10646	304 aa		3.75	□□□□□ -1.81

Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms