RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 CTSEP14091 401 aa11.15□□□□□ -0.62
CCDC47-206ENST00000584112 AMPD1P23109 780 aa11.15□□□□□ -0.62
CCDC47-206ENST00000584112 HK3P52790 923 aa11.15□□□□□ -0.62
CCDC47-206ENST00000584112 ADKP55263 362 aaKnown RBP11.15□□□□□ -0.62
CCDC47-206ENST00000584112 CDH6P55285 790 aa11.15□□□□□ -0.62
CCDC47-206ENST00000584112 SLC10A7Q0GE19 358 aa11.15□□□□□ -0.62
CCDC47-206ENST00000584112 MRPL49Q13405 166 aaKnown RBP11.15□□□□□ -0.62
CCDC47-206ENST00000584112 INPP5AQ14642 412 aa11.15□□□□□ -0.62
CCDC47-206ENST00000584112 CDKN3Q16667 212 aa11.15□□□□□ -0.62
CCDC47-206ENST00000584112 HADHQ16836 314 aaKnown RBP11.15□□□□□ -0.62
CCDC47-206ENST00000584112 RALGPS1Q5JS13 557 aa11.15□□□□□ -0.62
CCDC47-206ENST00000584112 ESRP1Q6NXG1 681 aaKnown RBP11.15□□□□□ -0.62
CCDC47-206ENST00000584112 LVRNQ6Q4G3 990 aa11.15□□□□□ -0.62
CCDC47-206ENST00000584112 CRTC1Q6UUV9 634 aa11.15□□□□□ -0.62
CCDC47-206ENST00000584112 SPNS3Q6ZMD2 512 aa11.15□□□□□ -0.62
CCDC47-206ENST00000584112 DPPA4Q7L190 304 aa11.15□□□□□ -0.62
CCDC47-206ENST00000584112 EFL1Q7Z2Z2 1120 aaKnown RBP11.15□□□□□ -0.62
CCDC47-206ENST00000584112 ZFAND4Q86XD8 727 aa11.15□□□□□ -0.62
CCDC47-206ENST00000584112 ZSWIM9Q86XI8 627 aa11.15□□□□□ -0.62
CCDC47-206ENST00000584112 LRRC49Q8IUZ0 686 aa11.15□□□□□ -0.62
CCDC47-206ENST00000584112 WDR48Q8TAF3 677 aa11.15□□□□□ -0.62
CCDC47-206ENST00000584112 ABHD17AQ96GS6 310 aa11.15□□□□□ -0.62
CCDC47-206ENST00000584112 WDR92Q96MX6 357 aa11.15□□□□□ -0.62
CCDC47-206ENST00000584112 BOCQ9BWV1 1114 aa11.15□□□□□ -0.62
CCDC47-206ENST00000584112 TCEAL2Q9H3H9 227 aaPredicted RBP11.15□□□□□ -0.62
CCDC47-206ENST00000584112 PCDH18Q9HCL0 1135 aa11.15□□□□□ -0.62
CCDC47-206ENST00000584112 KCTD5Q9NXV2 234 aa11.15□□□□□ -0.62
CCDC47-206ENST00000584112 IFNKQ9P0W0 207 aa11.15□□□□□ -0.62
CCDC47-206ENST00000584112 RCOR3Q9P2K3 495 aaPredicted RBP11.15□□□□□ -0.62
CCDC47-206ENST00000584112 ZNF469Q96JG9 3925 aaPredicted RBP11.15□□□□□ -0.63
CCDC47-206ENST00000584112 K7EM74 188 aa11.14□□□□□ -0.63
CCDC47-206ENST00000584112 CACNB4O00305 520 aaPredicted RBP11.14□□□□□ -0.63
CCDC47-206ENST00000584112 TRAFD1O14545 582 aaPredicted RBP11.14□□□□□ -0.63
CCDC47-206ENST00000584112 YY2O15391 372 aa11.14□□□□□ -0.63
CCDC47-206ENST00000584112 MAFKO60675 156 aa11.14□□□□□ -0.63
CCDC47-206ENST00000584112 GCATO75600 419 aa11.14□□□□□ -0.63
CCDC47-206ENST00000584112 GYPCP04921 128 aa11.14□□□□□ -0.63
CCDC47-206ENST00000584112 PCCBP05166 539 aa11.14□□□□□ -0.63
CCDC47-206ENST00000584112 HGFP14210 728 aa11.14□□□□□ -0.63
CCDC47-206ENST00000584112 DRD2P14416 443 aa11.14□□□□□ -0.63
CCDC47-206ENST00000584112 TCF4P15884 667 aa11.14□□□□□ -0.63
CCDC47-206ENST00000584112 TSHRP16473 764 aa11.14□□□□□ -0.63
CCDC47-206ENST00000584112 KELP23276 732 aa11.14□□□□□ -0.63
CCDC47-206ENST00000584112 MLLT3P42568 568 aaPredicted RBP11.14□□□□□ -0.63
CCDC47-206ENST00000584112 SSR1P43307 286 aaKnown RBP11.14□□□□□ -0.63
CCDC47-206ENST00000584112 SLC25A11Q02978 314 aaKnown RBP11.14□□□□□ -0.63
CCDC47-206ENST00000584112 RALGDSQ12967 914 aa11.14□□□□□ -0.63
CCDC47-206ENST00000584112 C1orf61Q13536 156 aa11.14□□□□□ -0.63
CCDC47-206ENST00000584112 KRT81Q14533 505 aa11.14□□□□□ -0.63
CCDC47-206ENST00000584112 LACTB2Q53H82 288 aaPredicted RBP11.14□□□□□ -0.63
CCDC47-206ENST00000584112 CCDC122Q5T0U0 273 aa11.14□□□□□ -0.63
CCDC47-206ENST00000584112 GUSBP11Q6P575 273 aa11.14□□□□□ -0.63
CCDC47-206ENST00000584112 ENPP7Q6UWV6 458 aa11.14□□□□□ -0.63
CCDC47-206ENST00000584112 LIPIQ6XZB0 460 aa11.14□□□□□ -0.63
CCDC47-206ENST00000584112 GKN2Q86XP6 184 aa11.14□□□□□ -0.63
CCDC47-206ENST00000584112 HID1Q8IV36 788 aa11.14□□□□□ -0.63
CCDC47-206ENST00000584112 EFCAB3Q8N7B9 438 aa11.14□□□□□ -0.63
CCDC47-206ENST00000584112 TSACCQ96A04 125 aaPredicted RBP11.14□□□□□ -0.63
CCDC47-206ENST00000584112 GRAMD1AQ96CP6 724 aa11.14□□□□□ -0.63
CCDC47-206ENST00000584112 BTBD6Q96KE9 485 aa11.14□□□□□ -0.63
CCDC47-206ENST00000584112 NUDCD1Q96RS6 583 aa11.14□□□□□ -0.63
CCDC47-206ENST00000584112 ETNK2Q9NVF9 386 aa11.14□□□□□ -0.63
CCDC47-206ENST00000584112 HAUS2Q9NVX0 235 aa11.14□□□□□ -0.63
CCDC47-206ENST00000584112 KLQ9UEF7 1012 aa11.14□□□□□ -0.63
CCDC47-206ENST00000584112 LCMT1Q9UIC8 334 aa11.14□□□□□ -0.63
CCDC47-206ENST00000584112 MAP1AP78559 2803 aaPredicted RBP11.14□□□□□ -0.63
CCDC47-206ENST00000584112 CCDC187A0A096LP49 1063 aa11.13□□□□□ -0.63
CCDC47-206ENST00000584112 PDE2AO00408 941 aaPredicted RBP11.13□□□□□ -0.63
CCDC47-206ENST00000584112 MUSKO15146 869 aa11.13□□□□□ -0.63
CCDC47-206ENST00000584112 CBFA2T2O43439 604 aa11.13□□□□□ -0.63
CCDC47-206ENST00000584112 HTRA2O43464 458 aaPredicted RBP11.13□□□□□ -0.63
CCDC47-206ENST00000584112 TCEA3O75764 348 aa11.13□□□□□ -0.63
CCDC47-206ENST00000584112 RECQL5O94762 991 aaPredicted RBP11.13□□□□□ -0.63
CCDC47-206ENST00000584112 CPP00450 1065 aa11.13□□□□□ -0.63
CCDC47-206ENST00000584112 TNFP01375 233 aa11.13□□□□□ -0.63
CCDC47-206ENST00000584112 CASP14P31944 242 aa11.13□□□□□ -0.63
CCDC47-206ENST00000584112 MMP13P45452 471 aa11.13□□□□□ -0.63
CCDC47-206ENST00000584112 PDX1P52945 283 aa11.13□□□□□ -0.63
CCDC47-206ENST00000584112 KIAA1024LP59773 190 aa11.13□□□□□ -0.63
CCDC47-206ENST00000584112 SRP54P61011 504 aaKnown RBP11.13□□□□□ -0.63
CCDC47-206ENST00000584112 TRIM14Q14142 442 aa11.13□□□□□ -0.63
CCDC47-206ENST00000584112 ALG11Q2TAA5 492 aa11.13□□□□□ -0.63
CCDC47-206ENST00000584112 SKOR2Q2VWA4 1001 aaPredicted RBP11.13□□□□□ -0.63
CCDC47-206ENST00000584112 MARC1Q5VT66 337 aa11.13□□□□□ -0.63
CCDC47-206ENST00000584112 TXNRD3NBQ6F5E7 133 aa11.13□□□□□ -0.63
CCDC47-206ENST00000584112 RBM44Q6ZP01 1051 aaKnown RBP11.13□□□□□ -0.63
CCDC47-206ENST00000584112 RD3Q7Z3Z2 195 aa11.13□□□□□ -0.63
CCDC47-206ENST00000584112 TP53INP2Q8IXH6 220 aa11.13□□□□□ -0.63
CCDC47-206ENST00000584112 SLC35F3Q8IY50 421 aa11.13□□□□□ -0.63
CCDC47-206ENST00000584112 PRR7Q8TB68 274 aa11.13□□□□□ -0.63
CCDC47-206ENST00000584112 CTNNBL1Q8WYA6 563 aaPredicted RBP11.13□□□□□ -0.63
CCDC47-206ENST00000584112 MGME1Q9BQP7 344 aa11.13□□□□□ -0.63
CCDC47-206ENST00000584112 CLPBQ9H078 707 aa11.13□□□□□ -0.63
CCDC47-206ENST00000584112 UVRAGQ9P2Y5 699 aa11.13□□□□□ -0.63
CCDC47-206ENST00000584112 B4GALT6Q9UBX8 382 aa11.13□□□□□ -0.63
CCDC47-206ENST00000584112 PNMA8BQ9ULN7 279 aaPredicted RBP11.13□□□□□ -0.63
CCDC47-206ENST00000584112 TP53TG5Q9Y2B4 290 aa11.13□□□□□ -0.63
CCDC47-206ENST00000584112 OR1A2Q9Y585 309 aa11.13□□□□□ -0.63
CCDC47-206ENST00000584112 PCDHGA7Q9Y5G6 932 aa11.13□□□□□ -0.63
CCDC47-206ENST00000584112 ZNF106Q9H2Y7 1883 aaKnown RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms