RNA–Protein interactions for RNA: ENST00000581737.1

CSNK1D-220, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-220ENST00000581737 MCUQ8NE86 351 aa13.52□□□□□ -0.25
CSNK1D-220ENST00000581737 CCDC110Q8TBZ0 833 aa13.52□□□□□ -0.25
CSNK1D-220ENST00000581737 PYROXD1Q8WU10 500 aa13.52□□□□□ -0.25
CSNK1D-220ENST00000581737 CPT1BQ92523 772 aa13.52□□□□□ -0.25
CSNK1D-220ENST00000581737 IFT43Q96FT9 208 aa13.52□□□□□ -0.25
CSNK1D-220ENST00000581737 NINJ2Q9NZG7 142 aa13.52□□□□□ -0.25
CSNK1D-220ENST00000581737 AAR2Q9Y312 384 aaKnown RBP13.52□□□□□ -0.25
CSNK1D-220ENST00000581737 NEUROG3Q9Y4Z2 214 aa13.52□□□□□ -0.25
CSNK1D-220ENST00000581737 FADS3Q9Y5Q0 445 aa13.52□□□□□ -0.25
CSNK1D-220ENST00000581737 TRPM6Q9BX84 2022 aa13.51□□□□□ -0.25
CSNK1D-220ENST00000581737 AREL1O15033 823 aa13.51□□□□□ -0.25
CSNK1D-220ENST00000581737 CDH16O75309 829 aa13.51□□□□□ -0.25
CSNK1D-220ENST00000581737 PCDH8O95206 1070 aa13.51□□□□□ -0.25
CSNK1D-220ENST00000581737 ETS1P14921 441 aa13.51□□□□□ -0.25
CSNK1D-220ENST00000581737 ENGP17813 658 aa13.51□□□□□ -0.25
CSNK1D-220ENST00000581737 NR1D1P20393 614 aa13.51□□□□□ -0.25
CSNK1D-220ENST00000581737 GRIA4P48058 902 aa13.51□□□□□ -0.25
CSNK1D-220ENST00000581737 TAS2R38P59533 333 aa13.51□□□□□ -0.25
CSNK1D-220ENST00000581737 KCNJ11Q14654 390 aa13.51□□□□□ -0.25
CSNK1D-220ENST00000581737 PARP6Q2NL67 630 aa13.51□□□□□ -0.25
CSNK1D-220ENST00000581737 CCDC38Q502W7 563 aa13.51□□□□□ -0.25
CSNK1D-220ENST00000581737 WDR45BQ5MNZ6 344 aa13.51□□□□□ -0.25
CSNK1D-220ENST00000581737 LYSMD4Q5XG99 296 aa13.51□□□□□ -0.25
CSNK1D-220ENST00000581737 PIP4P1Q86T03 277 aa13.51□□□□□ -0.25
CSNK1D-220ENST00000581737 PRPF39Q86UA1 669 aaKnown RBP13.51□□□□□ -0.25
CSNK1D-220ENST00000581737 TRIM69Q86WT6 500 aa13.51□□□□□ -0.25
CSNK1D-220ENST00000581737 PALM2Q8IXS6 379 aa13.51□□□□□ -0.25
CSNK1D-220ENST00000581737 ZBED8Q8IZ13 594 aa13.51□□□□□ -0.25
CSNK1D-220ENST00000581737 TADA1Q96BN2 335 aa13.51□□□□□ -0.25
CSNK1D-220ENST00000581737 FEM1CQ96JP0 617 aa13.51□□□□□ -0.25
CSNK1D-220ENST00000581737 HSPA12BQ96MM6 686 aa13.51□□□□□ -0.25
CSNK1D-220ENST00000581737 FSD1LQ9BXM9 530 aa13.51□□□□□ -0.25
CSNK1D-220ENST00000581737 VPS37BQ9H9H4 285 aa13.51□□□□□ -0.25
CSNK1D-220ENST00000581737 PCDH12Q9NPG4 1184 aa13.51□□□□□ -0.25
CSNK1D-220ENST00000581737 FETUBQ9UGM5 382 aa13.51□□□□□ -0.25
CSNK1D-220ENST00000581737 MSRB2Q9Y3D2 182 aa13.51□□□□□ -0.25
CSNK1D-220ENST00000581737 NFS1Q9Y697 457 aa13.51□□□□□ -0.25
CSNK1D-220ENST00000581737 GON4LQ3T8J9 2241 aa13.51□□□□□ -0.25
CSNK1D-220ENST00000581737 EXOC1LA0A1B0GW35 172 aa13.5□□□□□ -0.25
CSNK1D-220ENST00000581737 METTL12A8MUP2 240 aa13.5□□□□□ -0.25
CSNK1D-220ENST00000581737 E7ESA3 106 aa13.5□□□□□ -0.25
CSNK1D-220ENST00000581737 FZD6O60353 706 aa13.5□□□□□ -0.25
CSNK1D-220ENST00000581737 RNGTTO60942 597 aaKnown RBP13.5□□□□□ -0.25
CSNK1D-220ENST00000581737 PMPCBO75439 489 aa13.5□□□□□ -0.25
CSNK1D-220ENST00000581737 FSBPO95073 299 aa13.5□□□□□ -0.25
CSNK1D-220ENST00000581737 NDST3O95803 873 aa13.5□□□□□ -0.25
CSNK1D-220ENST00000581737 EPOP01588 193 aa13.5□□□□□ -0.25
CSNK1D-220ENST00000581737 CYP2A6P11509 494 aaPredicted RBP13.5□□□□□ -0.25
CSNK1D-220ENST00000581737 MLNP12872 115 aa13.5□□□□□ -0.25
CSNK1D-220ENST00000581737 PSMB4P28070 264 aa13.5□□□□□ -0.25
CSNK1D-220ENST00000581737 STX2P32856 288 aa13.5□□□□□ -0.25
CSNK1D-220ENST00000581737 HOXD12P35452 270 aa13.5□□□□□ -0.25
CSNK1D-220ENST00000581737 MMP12P39900 470 aa13.5□□□□□ -0.25
CSNK1D-220ENST00000581737 WNT3AP56704 352 aa13.5□□□□□ -0.25
CSNK1D-220ENST00000581737 RPS21P63220 83 aaKnown RBP13.5□□□□□ -0.25
CSNK1D-220ENST00000581737 SIM1P81133 766 aaPredicted RBP13.5□□□□□ -0.25
CSNK1D-220ENST00000581737 CDK18Q07002 472 aa13.5□□□□□ -0.25
CSNK1D-220ENST00000581737 CBLBQ13191 982 aa13.5□□□□□ -0.25
CSNK1D-220ENST00000581737 SEMA5AQ13591 1074 aa13.5□□□□□ -0.25
CSNK1D-220ENST00000581737 PCSK7Q16549 785 aa13.5□□□□□ -0.25
CSNK1D-220ENST00000581737 SETMARQ53H47 684 aaPredicted RBP13.5□□□□□ -0.25
CSNK1D-220ENST00000581737 C19orf48Q6RUI8 117 aa13.5□□□□□ -0.25
CSNK1D-220ENST00000581737 KDM7AQ6ZMT4 941 aa13.5□□□□□ -0.25
CSNK1D-220ENST00000581737 DPPA4Q7L190 304 aa13.5□□□□□ -0.25
CSNK1D-220ENST00000581737 RABEPKQ7Z6M1 372 aa13.5□□□□□ -0.25
CSNK1D-220ENST00000581737 HORMAD1Q86X24 394 aa13.5□□□□□ -0.25
CSNK1D-220ENST00000581737 CCNJLQ8IV13 435 aa13.5□□□□□ -0.25
CSNK1D-220ENST00000581737 CHCHD4Q8N4Q1 142 aa13.5□□□□□ -0.25
CSNK1D-220ENST00000581737 GLIS1Q8NBF1 620 aa13.5□□□□□ -0.25
CSNK1D-220ENST00000581737 LPCAT1Q8NF37 534 aa13.5□□□□□ -0.25
CSNK1D-220ENST00000581737 OR2I1PQ8NGU4 316 aa13.5□□□□□ -0.25
CSNK1D-220ENST00000581737 SPATA22Q8NHS9 363 aa13.5□□□□□ -0.25
CSNK1D-220ENST00000581737 CXorf40AQ8TE69 158 aa13.5□□□□□ -0.25
CSNK1D-220ENST00000581737 NSMCE3Q96MG7 304 aa13.5□□□□□ -0.25
CSNK1D-220ENST00000581737 SRPK1Q96SB4 655 aaKnown RBP13.5□□□□□ -0.25
CSNK1D-220ENST00000581737 NAT9Q9BTE0 207 aa13.5□□□□□ -0.25
CSNK1D-220ENST00000581737 C1QTNF7Q9BXJ2 289 aa13.5□□□□□ -0.25
CSNK1D-220ENST00000581737 C6orf106Q9H6K1 298 aaPredicted RBP13.5□□□□□ -0.25
CSNK1D-220ENST00000581737 SENP1Q9P0U3 644 aa13.5□□□□□ -0.25
CSNK1D-220ENST00000581737 SUSD2Q9UGT4 822 aa13.5□□□□□ -0.25
CSNK1D-220ENST00000581737 ADAM21Q9UKJ8 722 aa13.5□□□□□ -0.25
CSNK1D-220ENST00000581737 DMTF1Q9Y222 760 aa13.5□□□□□ -0.25
CSNK1D-220ENST00000581737 CHKBQ9Y259 395 aa13.5□□□□□ -0.25
CSNK1D-220ENST00000581737 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.5□□□□□ -0.25
CSNK1D-220ENST00000581737 TNRC6BQ9UPQ9 1833 aaKnown RBP13.5□□□□□ -0.25
CSNK1D-220ENST00000581737 A0A1W2PQU0 124 aa13.49□□□□□ -0.25
CSNK1D-220ENST00000581737 TLDC2A0PJX2 215 aa13.49□□□□□ -0.25
CSNK1D-220ENST00000581737 LATO43561 262 aa13.49□□□□□ -0.25
CSNK1D-220ENST00000581737 MT-CYBP00156 380 aaPredicted RBP13.49□□□□□ -0.25
CSNK1D-220ENST00000581737 HLA-DPA1P20036 260 aa13.49□□□□□ -0.25
CSNK1D-220ENST00000581737 VIPR1P32241 457 aa13.49□□□□□ -0.25
CSNK1D-220ENST00000581737 KYNUQ16719 465 aa13.49□□□□□ -0.25
CSNK1D-220ENST00000581737 BBS9Q3SYG4 887 aa13.49□□□□□ -0.25
CSNK1D-220ENST00000581737 TMEM52BQ4KMG9 183 aa13.49□□□□□ -0.25
CSNK1D-220ENST00000581737 SOWAHCQ53LP3 525 aaPredicted RBP13.49□□□□□ -0.25
CSNK1D-220ENST00000581737 TTMPQ5BVD1 217 aa13.49□□□□□ -0.25
CSNK1D-220ENST00000581737 LRRC73Q5JTD7 316 aa13.49□□□□□ -0.25
CSNK1D-220ENST00000581737 KDELC1Q6UW63 502 aa13.49□□□□□ -0.25
CSNK1D-220ENST00000581737 ZSWIM9Q86XI8 627 aa13.49□□□□□ -0.25
CSNK1D-220ENST00000581737 DEFB119Q8N690 84 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms