RNA–Protein interactions for RNA: ENST00000581707.1

SREBF1-220, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-220ENST00000581707 RAVER1Q8IY67 606 aaKnown RBP19.44■□□□□ 0.7
SREBF1-220ENST00000581707 ARL10Q8N8L6 244 aa19.44■□□□□ 0.7
SREBF1-220ENST00000581707 KYQ8NBH2 561 aa19.44■□□□□ 0.7
SREBF1-220ENST00000581707 SPC24Q8NBT2 197 aa19.44■□□□□ 0.7
SREBF1-220ENST00000581707 KIAA1524Q8TCG1 905 aa19.44■□□□□ 0.7
SREBF1-220ENST00000581707 TEKT5Q96M29 485 aa19.44■□□□□ 0.7
SREBF1-220ENST00000581707 HEMGNQ9BXL5 484 aa19.44■□□□□ 0.7
SREBF1-220ENST00000581707 FRMD8Q9BZ67 464 aaPredicted RBP19.44■□□□□ 0.7
SREBF1-220ENST00000581707 NRSN2Q9GZP1 204 aa19.44■□□□□ 0.7
SREBF1-220ENST00000581707 PJA2O43164 708 aa19.43■□□□□ 0.7
SREBF1-220ENST00000581707 MTSS1O43312 755 aa19.43■□□□□ 0.7
SREBF1-220ENST00000581707 SOD1P00441 154 aa19.43■□□□□ 0.7
SREBF1-220ENST00000581707 PYGLP06737 847 aa19.43■□□□□ 0.7
SREBF1-220ENST00000581707 COPS2P61201 443 aa19.43■□□□□ 0.7
SREBF1-220ENST00000581707 PCSK7Q16549 785 aa19.43■□□□□ 0.7
SREBF1-220ENST00000581707 PERM1Q5SV97 790 aa19.43■□□□□ 0.7
SREBF1-220ENST00000581707 ZC3H18Q86VM9 953 aaKnown RBP19.43■□□□□ 0.7
SREBF1-220ENST00000581707 TMEM139Q8IV31 216 aa19.43■□□□□ 0.7
SREBF1-220ENST00000581707 FAM46DQ8NEK8 389 aa19.43■□□□□ 0.7
SREBF1-220ENST00000581707 SPATA22Q8NHS9 363 aa19.43■□□□□ 0.7
SREBF1-220ENST00000581707 CCHCR1Q8TD31 782 aa19.43■□□□□ 0.7
SREBF1-220ENST00000581707 TADA1Q96BN2 335 aa19.43■□□□□ 0.7
SREBF1-220ENST00000581707 HAUS1Q96CS2 278 aa19.43■□□□□ 0.7
SREBF1-220ENST00000581707 NXPE2Q96DL1 559 aa19.43■□□□□ 0.7
SREBF1-220ENST00000581707 DEPDC7Q96QD5 511 aa19.43■□□□□ 0.7
SREBF1-220ENST00000581707 TRIB3Q96RU7 358 aa19.43■□□□□ 0.7
SREBF1-220ENST00000581707 RIOK2Q9BVS4 552 aaKnown RBP19.43■□□□□ 0.7
SREBF1-220ENST00000581707 SUDS3Q9H7L9 328 aaPredicted RBP19.43■□□□□ 0.7
SREBF1-220ENST00000581707 CARS2Q9HA77 564 aaKnown RBP19.43■□□□□ 0.7
SREBF1-220ENST00000581707 AK5Q9Y6K8 562 aa19.43■□□□□ 0.7
SREBF1-220ENST00000581707 ARHGEF17Q96PE2 2063 aaPredicted RBP19.42■□□□□ 0.7
SREBF1-220ENST00000581707 CHD6Q8TD26 2715 aa19.42■□□□□ 0.7
SREBF1-220ENST00000581707 FUCA1P04066 466 aa19.42■□□□□ 0.7
SREBF1-220ENST00000581707 CDK18Q07002 472 aa19.42■□□□□ 0.7
SREBF1-220ENST00000581707 WASHC5Q12768 1159 aa19.42■□□□□ 0.7
SREBF1-220ENST00000581707 RTP5Q14D33 572 aa19.42■□□□□ 0.7
SREBF1-220ENST00000581707 SLC14A2Q15849 920 aa19.42■□□□□ 0.7
SREBF1-220ENST00000581707 BBS12Q6ZW61 710 aa19.42■□□□□ 0.7
SREBF1-220ENST00000581707 CCL4L1Q8NHW4 92 aa19.42■□□□□ 0.7
SREBF1-220ENST00000581707 HIC2Q96JB3 615 aa19.42■□□□□ 0.7
SREBF1-220ENST00000581707 SUFUQ9UMX1 484 aa19.42■□□□□ 0.7
SREBF1-220ENST00000581707 SLC17A4Q9Y2C5 497 aa19.42■□□□□ 0.7
SREBF1-220ENST00000581707 URB1O60287 2271 aaKnown RBP19.41■□□□□ 0.7
SREBF1-220ENST00000581707 CCDC66A2RUB6 948 aa19.41■□□□□ 0.7
SREBF1-220ENST00000581707 HACD1B0YJ81 288 aa19.41■□□□□ 0.7
SREBF1-220ENST00000581707 MT-CYBP00156 380 aaPredicted RBP19.41■□□□□ 0.7
SREBF1-220ENST00000581707 CTNNA2P26232 953 aa19.41■□□□□ 0.7
SREBF1-220ENST00000581707 GNPDA1P46926 289 aa19.41■□□□□ 0.7
SREBF1-220ENST00000581707 POLD2P49005 469 aa19.41■□□□□ 0.7
SREBF1-220ENST00000581707 SPINT3P49223 89 aa19.41■□□□□ 0.7
SREBF1-220ENST00000581707 CCDC181Q5TID7 509 aa19.41■□□□□ 0.7
SREBF1-220ENST00000581707 CCDC70Q6NSX1 233 aa19.41■□□□□ 0.7
SREBF1-220ENST00000581707 OGFOD3Q6PK18 319 aa19.41■□□□□ 0.7
SREBF1-220ENST00000581707 DOK6Q6PKX4 331 aa19.41■□□□□ 0.7
SREBF1-220ENST00000581707 TXLNBQ8N3L3 684 aa19.41■□□□□ 0.7
SREBF1-220ENST00000581707 LRRC57Q8N9N7 239 aa19.41■□□□□ 0.7
SREBF1-220ENST00000581707 GPR156Q8NFN8 814 aa19.41■□□□□ 0.7
SREBF1-220ENST00000581707 GPBAR1Q8TDU6 330 aa19.41■□□□□ 0.7
SREBF1-220ENST00000581707 QKIQ96PU8 341 aaKnown RBP eCLIP19.41■□□□□ 0.7
SREBF1-220ENST00000581707 AGAP2Q99490 1192 aa19.41■□□□□ 0.7
SREBF1-220ENST00000581707 CCDC3Q9BQI4 270 aa19.41■□□□□ 0.7
SREBF1-220ENST00000581707 FAM83DQ9H4H8 585 aa19.41■□□□□ 0.7
SREBF1-220ENST00000581707 MAGEE1Q9HCI5 957 aa19.41■□□□□ 0.7
SREBF1-220ENST00000581707 TRNAU1APQ9NX07 287 aaKnown RBP19.41■□□□□ 0.7
SREBF1-220ENST00000581707 UBP1Q9NZI7 540 aa19.41■□□□□ 0.7
SREBF1-220ENST00000581707 PKD2L2Q9NZM6 624 aa19.41■□□□□ 0.7
SREBF1-220ENST00000581707 CFAP47Q6ZTR5 3102 aa19.4■□□□□ 0.7
SREBF1-220ENST00000581707 GRID2IPA4D2P6 1211 aa19.4■□□□□ 0.7
SREBF1-220ENST00000581707 RGSL1A5PLK6 1076 aa19.4■□□□□ 0.7
SREBF1-220ENST00000581707 APOC4-APOC2K7ER74 178 aa19.4■□□□□ 0.7
SREBF1-220ENST00000581707 CSO75390 466 aaKnown RBP19.4■□□□□ 0.7
SREBF1-220ENST00000581707 PMPCBO75439 489 aa19.4■□□□□ 0.7
SREBF1-220ENST00000581707 NDST3O95803 873 aa19.4■□□□□ 0.7
SREBF1-220ENST00000581707 APOC2P02655 101 aa19.4■□□□□ 0.7
SREBF1-220ENST00000581707 IVLP07476 585 aa19.4■□□□□ 0.7
SREBF1-220ENST00000581707 PIRTP0C851 137 aa19.4■□□□□ 0.7
SREBF1-220ENST00000581707 CD68P34810 354 aaPredicted RBP19.4■□□□□ 0.7
SREBF1-220ENST00000581707 RWDD2BP57060 319 aa19.4■□□□□ 0.7
SREBF1-220ENST00000581707 LYSMD3Q7Z3D4 306 aa19.4■□□□□ 0.7
SREBF1-220ENST00000581707 OR6C4Q8NGE1 309 aa19.4■□□□□ 0.7
SREBF1-220ENST00000581707 WDR48Q8TAF3 677 aa19.4■□□□□ 0.7
SREBF1-220ENST00000581707 PTCD2Q8WV60 388 aaKnown RBP19.4■□□□□ 0.7
SREBF1-220ENST00000581707 HTR3CQ8WXA8 447 aa19.4■□□□□ 0.7
SREBF1-220ENST00000581707 SCARF2Q96GP6 870 aaPredicted RBP19.4■□□□□ 0.7
SREBF1-220ENST00000581707 WDR24Q96S15 920 aa19.4■□□□□ 0.7
SREBF1-220ENST00000581707 VAT1Q99536 393 aa19.4■□□□□ 0.7
SREBF1-220ENST00000581707 DPEP2Q9H4A9 486 aa19.4■□□□□ 0.7
SREBF1-220ENST00000581707 ZFYVE1Q9HBF4 777 aa19.4■□□□□ 0.7
SREBF1-220ENST00000581707 KLHL8Q9P2G9 620 aaPredicted RBP19.4■□□□□ 0.7
SREBF1-220ENST00000581707 EFR3BQ9Y2G0 817 aa19.4■□□□□ 0.7
SREBF1-220ENST00000581707 RAXQ9Y2V3 346 aa19.4■□□□□ 0.7
SREBF1-220ENST00000581707 TMEM98Q9Y2Y6 226 aa19.4■□□□□ 0.7
SREBF1-220ENST00000581707 PCDHB1Q9Y5F3 818 aa19.4■□□□□ 0.7
SREBF1-220ENST00000581707 CELSR3Q9NYQ7 3312 aa19.39■□□□□ 0.69
SREBF1-220ENST00000581707 GOLGA6L6A8MZA4 724 aa19.39■□□□□ 0.69
SREBF1-220ENST00000581707 B4DGG1 531 aa19.39■□□□□ 0.69
SREBF1-220ENST00000581707 H7C0C1 242 aa19.39■□□□□ 0.69
SREBF1-220ENST00000581707 INPP4BO15327 924 aa19.39■□□□□ 0.69
SREBF1-220ENST00000581707 NFKB1P19838 968 aa19.39■□□□□ 0.69
SREBF1-220ENST00000581707 ADCY8P40145 1251 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms