RNA–Protein interactions for RNA: ENST00000581598.1

CCDC42-203, Transcript of coiled-coil domain containing 42, humanhuman

TSL 4

Gene CCDC42, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-203ENST00000581598 ZNF765Q7L2R6 523 aa20.87■□□□□ 0.93
CCDC42-203ENST00000581598 CCNJLQ8IV13 435 aa20.87■□□□□ 0.93
CCDC42-203ENST00000581598 PQLC3Q8N755 202 aa20.87■□□□□ 0.93
CCDC42-203ENST00000581598 ACRBPQ8NEB7 543 aa20.87■□□□□ 0.93
CCDC42-203ENST00000581598 CCL4L1Q8NHW4 92 aa20.87■□□□□ 0.93
CCDC42-203ENST00000581598 HDAC11Q96DB2 347 aa20.87■□□□□ 0.93
CCDC42-203ENST00000581598 TRIM44Q96DX7 344 aaPredicted RBP20.87■□□□□ 0.93
CCDC42-203ENST00000581598 SCARF2Q96GP6 870 aaPredicted RBP20.87■□□□□ 0.93
CCDC42-203ENST00000581598 DESI2Q9BSY9 194 aa20.87■□□□□ 0.93
CCDC42-203ENST00000581598 TDRD1Q9BXT4 1180 aaKnown RBP20.87■□□□□ 0.93
CCDC42-203ENST00000581598 PACSIN1Q9BY11 444 aa20.87■□□□□ 0.93
CCDC42-203ENST00000581598 GSDMCQ9BYG8 508 aa20.87■□□□□ 0.93
CCDC42-203ENST00000581598 STRADBQ9C0K7 418 aa20.87■□□□□ 0.93
CCDC42-203ENST00000581598 DPEP2Q9H4A9 486 aa20.87■□□□□ 0.93
CCDC42-203ENST00000581598 SYNDIG1Q9H7V2 258 aa20.87■□□□□ 0.93
CCDC42-203ENST00000581598 CARS2Q9HA77 564 aaKnown RBP20.87■□□□□ 0.93
CCDC42-203ENST00000581598 RBM22Q9NW64 420 aaKnown RBP eCLIP20.87■□□□□ 0.93
CCDC42-203ENST00000581598 MOSPD1Q9UJG1 213 aa20.87■□□□□ 0.93
CCDC42-203ENST00000581598 PYCARDQ9ULZ3 195 aa20.87■□□□□ 0.93
CCDC42-203ENST00000581598 RPL26L1Q9UNX3 145 aaKnown RBP20.87■□□□□ 0.93
CCDC42-203ENST00000581598 SLC17A4Q9Y2C5 497 aa20.87■□□□□ 0.93
CCDC42-203ENST00000581598 IPO7O95373 1038 aaKnown RBP20.86■□□□□ 0.93
CCDC42-203ENST00000581598 FUCA1P04066 466 aa20.86■□□□□ 0.93
CCDC42-203ENST00000581598 PYGLP06737 847 aa20.86■□□□□ 0.93
CCDC42-203ENST00000581598 IVLP07476 585 aa20.86■□□□□ 0.93
CCDC42-203ENST00000581598 CTPS1P17812 591 aa20.86■□□□□ 0.93
CCDC42-203ENST00000581598 CA4P22748 312 aa20.86■□□□□ 0.93
CCDC42-203ENST00000581598 INHBCP55103 352 aa20.86■□□□□ 0.93
CCDC42-203ENST00000581598 ITKQ08881 620 aa20.86■□□□□ 0.93
CCDC42-203ENST00000581598 ILF3Q12906 894 aaKnown RBP eCLIP20.86■□□□□ 0.93
CCDC42-203ENST00000581598 IHHQ14623 411 aa20.86■□□□□ 0.93
CCDC42-203ENST00000581598 LRRC66Q68CR7 880 aa20.86■□□□□ 0.93
CCDC42-203ENST00000581598 RAET1GQ6H3X3 334 aa20.86■□□□□ 0.93
CCDC42-203ENST00000581598 ADAMTSL4Q6UY14 1074 aa20.86■□□□□ 0.93
CCDC42-203ENST00000581598 SPRED1Q7Z699 444 aa20.86■□□□□ 0.93
CCDC42-203ENST00000581598 B3GNT8Q7Z7M8 397 aa20.86■□□□□ 0.93
CCDC42-203ENST00000581598 VSIG1Q86XK7 387 aa20.86■□□□□ 0.93
CCDC42-203ENST00000581598 NRROSQ86YC3 692 aa20.86■□□□□ 0.93
CCDC42-203ENST00000581598 ARRDC2Q8TBH0 407 aa20.86■□□□□ 0.93
CCDC42-203ENST00000581598 SNRNP27Q8WVK2 155 aaKnown RBP20.86■□□□□ 0.93
CCDC42-203ENST00000581598 NAF1Q96HR8 494 aaKnown RBP20.86■□□□□ 0.93
CCDC42-203ENST00000581598 INTUQ9ULD6 942 aa20.86■□□□□ 0.93
CCDC42-203ENST00000581598 PCDHA13Q9Y5I0 950 aa20.86■□□□□ 0.93
CCDC42-203ENST00000581598 CAPN8A6NHC0 703 aa20.85■□□□□ 0.93
CCDC42-203ENST00000581598 EIF4E1BA6NMX2 242 aaKnown RBP20.85■□□□□ 0.93
CCDC42-203ENST00000581598 B4DGG1 531 aa20.85■□□□□ 0.93
CCDC42-203ENST00000581598 PLD2O14939 933 aa20.85■□□□□ 0.93
CCDC42-203ENST00000581598 TNFSF15O95150 251 aa20.85■□□□□ 0.93
CCDC42-203ENST00000581598 SOD1P00441 154 aa20.85■□□□□ 0.93
CCDC42-203ENST00000581598 KDELR1P24390 212 aa20.85■□□□□ 0.93
CCDC42-203ENST00000581598 GJC1P36383 396 aa20.85■□□□□ 0.93
CCDC42-203ENST00000581598 CXADRP78310 365 aa20.85■□□□□ 0.93
CCDC42-203ENST00000581598 DSC2Q02487 901 aa20.85■□□□□ 0.93
CCDC42-203ENST00000581598 PTSQ03393 145 aa20.85■□□□□ 0.93
CCDC42-203ENST00000581598 GBE1Q04446 702 aa20.85■□□□□ 0.93
CCDC42-203ENST00000581598 PEX6Q13608 980 aa20.85■□□□□ 0.93
CCDC42-203ENST00000581598 PTPRRQ15256 657 aa20.85■□□□□ 0.93
CCDC42-203ENST00000581598 ZNF438Q7Z4V0 828 aa20.85■□□□□ 0.93
CCDC42-203ENST00000581598 RNF157Q96PX1 679 aa20.85■□□□□ 0.93
CCDC42-203ENST00000581598 LYSMD1Q96S90 227 aa20.85■□□□□ 0.93
CCDC42-203ENST00000581598 ABCG8Q9H221 673 aa20.85■□□□□ 0.93
CCDC42-203ENST00000581598 LUC7LQ9NQ29 371 aaKnown RBP20.85■□□□□ 0.93
CCDC42-203ENST00000581598 LRIT1Q9P2V4 623 aa20.85■□□□□ 0.93
CCDC42-203ENST00000581598 SUFUQ9UMX1 484 aa20.85■□□□□ 0.93
CCDC42-203ENST00000581598 PCDHGA7Q9Y5G6 932 aa20.85■□□□□ 0.93
CCDC42-203ENST00000581598 RNF215Q9Y6U7 377 aa20.85■□□□□ 0.93
CCDC42-203ENST00000581598 PMS2P1A4D2B8 440 aa20.84■□□□□ 0.93
CCDC42-203ENST00000581598 KLK10O43240 276 aa20.84■□□□□ 0.93
CCDC42-203ENST00000581598 PRLP01236 227 aa20.84■□□□□ 0.93
CCDC42-203ENST00000581598 MAGEA1P43355 309 aa20.84■□□□□ 0.93
CCDC42-203ENST00000581598 GPR1P46091 355 aa20.84■□□□□ 0.93
CCDC42-203ENST00000581598 VAV2P52735 878 aa20.84■□□□□ 0.93
CCDC42-203ENST00000581598 STC1P52823 247 aa20.84■□□□□ 0.93
CCDC42-203ENST00000581598 EPHB1P54762 984 aa20.84■□□□□ 0.93
CCDC42-203ENST00000581598 ZFP36L1Q07352 338 aaKnown RBP20.84■□□□□ 0.93
CCDC42-203ENST00000581598 SLC10A2Q12908 348 aaPredicted RBP20.84■□□□□ 0.93
CCDC42-203ENST00000581598 NR1D2Q14995 579 aa20.84■□□□□ 0.93
CCDC42-203ENST00000581598 CLPPQ16740 277 aaPredicted RBP20.84■□□□□ 0.93
CCDC42-203ENST00000581598 RAB11FIP2Q7L804 512 aa20.84■□□□□ 0.93
CCDC42-203ENST00000581598 SFTPA2Q8IWL1 248 aa20.84■□□□□ 0.93
CCDC42-203ENST00000581598 CCDC13Q8IYE1 715 aa20.84■□□□□ 0.93
CCDC42-203ENST00000581598 NRSN1Q8IZ57 195 aa20.84■□□□□ 0.93
CCDC42-203ENST00000581598 FBXO39Q8N4B4 442 aa20.84■□□□□ 0.93
CCDC42-203ENST00000581598 TMEM159Q96B96 161 aa20.84■□□□□ 0.93
CCDC42-203ENST00000581598 AP2M1Q96CW1 435 aa20.84■□□□□ 0.93
CCDC42-203ENST00000581598 EPB41L5Q9HCM4 733 aa20.84■□□□□ 0.93
CCDC42-203ENST00000581598 SPATS2LQ9NUQ6 558 aaKnown RBP20.84■□□□□ 0.93
CCDC42-203ENST00000581598 DTLQ9NZJ0 730 aa20.84■□□□□ 0.93
CCDC42-203ENST00000581598 ACSL6Q9UKU0 697 aa20.84■□□□□ 0.93
CCDC42-203ENST00000581598 ZFC3H1O60293 1989 aaKnown RBP20.84■□□□□ 0.93
CCDC42-203ENST00000581598 GCN1Q92616 2671 aaKnown RBP20.83■□□□□ 0.93
CCDC42-203ENST00000581598 MTA2O94776 668 aa20.83■□□□□ 0.93
CCDC42-203ENST00000581598 MAP3K6O95382 1288 aa20.83■□□□□ 0.93
CCDC42-203ENST00000581598 FGF1P05230 155 aa20.83■□□□□ 0.93
CCDC42-203ENST00000581598 HLA-DQB2P05538 268 aa20.83■□□□□ 0.93
CCDC42-203ENST00000581598 CCDC175P0C221 793 aa20.83■□□□□ 0.93
CCDC42-203ENST00000581598 UGT1A5P35504 534 aa20.83■□□□□ 0.93
CCDC42-203ENST00000581598 ARHGAP25P42331 645 aa20.83■□□□□ 0.93
CCDC42-203ENST00000581598 B4GALNT1Q00973 533 aa20.83■□□□□ 0.93
CCDC42-203ENST00000581598 NIPAL4Q0D2K0 466 aa20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms