RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 TMEM5Q9Y2B1 443 aa4.75□□□□□ -1.65
SMCHD1-205ENST00000581383 OR6C75A6NL08 312 aa4.74□□□□□ -1.65
SMCHD1-205ENST00000581383 HSPA12AO43301 675 aa4.74□□□□□ -1.65
SMCHD1-205ENST00000581383 HS6ST1O60243 411 aa4.74□□□□□ -1.65
SMCHD1-205ENST00000581383 ZIC3O60481 467 aa4.74□□□□□ -1.65
SMCHD1-205ENST00000581383 JRKO75564 520 aa4.74□□□□□ -1.65
SMCHD1-205ENST00000581383 BEST1O76090 585 aa4.74□□□□□ -1.65
SMCHD1-205ENST00000581383 SOX30O94993 753 aa4.74□□□□□ -1.65
SMCHD1-205ENST00000581383 STARD3NLO95772 234 aa4.74□□□□□ -1.65
SMCHD1-205ENST00000581383 TMEM11P17152 192 aa4.74□□□□□ -1.65
SMCHD1-205ENST00000581383 HNRNPH1P31943 449 aaKnown RBP4.74□□□□□ -1.65
SMCHD1-205ENST00000581383 RPL3P39023 403 aaKnown RBP4.74□□□□□ -1.65
SMCHD1-205ENST00000581383 CAMPP49913 170 aa4.74□□□□□ -1.65
SMCHD1-205ENST00000581383 NUDT6P53370 316 aa4.74□□□□□ -1.65
SMCHD1-205ENST00000581383 ABATP80404 500 aa4.74□□□□□ -1.65
SMCHD1-205ENST00000581383 ROR2Q01974 943 aaKnown RBP4.74□□□□□ -1.65
SMCHD1-205ENST00000581383 EPS8Q12929 822 aa4.74□□□□□ -1.65
SMCHD1-205ENST00000581383 ADIPOQQ15848 244 aa4.74□□□□□ -1.65
SMCHD1-205ENST00000581383 ASTE1Q2TB18 679 aaPredicted RBP4.74□□□□□ -1.65
SMCHD1-205ENST00000581383 RAB41Q5JT25 222 aa4.74□□□□□ -1.65
SMCHD1-205ENST00000581383 PLEKHS1Q5SXH7 462 aa4.74□□□□□ -1.65
SMCHD1-205ENST00000581383 LRIF1Q5T3J3 769 aa4.74□□□□□ -1.65
SMCHD1-205ENST00000581383 JADE1Q6IE81 842 aa4.74□□□□□ -1.65
SMCHD1-205ENST00000581383 PLEKHA7Q6IQ23 1121 aa4.74□□□□□ -1.65
SMCHD1-205ENST00000581383 METTL2BQ6P1Q9 378 aaKnown RBP4.74□□□□□ -1.65
SMCHD1-205ENST00000581383 PDXDC1Q6P996 788 aa4.74□□□□□ -1.65
SMCHD1-205ENST00000581383 SEPT14Q6ZU15 432 aa4.74□□□□□ -1.65
SMCHD1-205ENST00000581383 ADHFE1Q8IWW8 467 aa4.74□□□□□ -1.65
SMCHD1-205ENST00000581383 HJURPQ8NCD3 748 aaPredicted RBP4.74□□□□□ -1.65
SMCHD1-205ENST00000581383 PGAM5Q96HS1 289 aa4.74□□□□□ -1.65
SMCHD1-205ENST00000581383 METTL2AQ96IZ6 378 aaKnown RBP4.74□□□□□ -1.65
SMCHD1-205ENST00000581383 ACOX2Q99424 681 aa4.74□□□□□ -1.65
SMCHD1-205ENST00000581383 PCGF1Q9BSM1 259 aa4.74□□□□□ -1.65
SMCHD1-205ENST00000581383 PLK3Q9H4B4 646 aa4.74□□□□□ -1.65
SMCHD1-205ENST00000581383 PPP1R3EQ9H7J1 279 aa4.74□□□□□ -1.65
SMCHD1-205ENST00000581383 SLC9A2Q9UBY0 812 aa4.74□□□□□ -1.65
SMCHD1-205ENST00000581383 CDC14AQ9UNH5 594 aa4.74□□□□□ -1.65
SMCHD1-205ENST00000581383 TPPPO94811 219 aa4.73□□□□□ -1.65
SMCHD1-205ENST00000581383 MAOAP21397 527 aa4.73□□□□□ -1.65
SMCHD1-205ENST00000581383 RAD52P43351 418 aa4.73□□□□□ -1.65
SMCHD1-205ENST00000581383 MXI1P50539 228 aa4.73□□□□□ -1.65
SMCHD1-205ENST00000581383 PSMC6P62333 389 aa4.73□□□□□ -1.65
SMCHD1-205ENST00000581383 NUCB1Q02818 461 aa4.73□□□□□ -1.65
SMCHD1-205ENST00000581383 AIMP2Q13155 320 aaKnown RBP4.73□□□□□ -1.65
SMCHD1-205ENST00000581383 EFNB3Q15768 340 aa4.73□□□□□ -1.65
SMCHD1-205ENST00000581383 LCE1EQ5T753 118 aa4.73□□□□□ -1.65
SMCHD1-205ENST00000581383 GGNBP1Q5YKI7 109 aa4.73□□□□□ -1.65
SMCHD1-205ENST00000581383 ZC3HC1Q86WB0 502 aaKnown RBP4.73□□□□□ -1.65
SMCHD1-205ENST00000581383 DSELQ8IZU8 1212 aa4.73□□□□□ -1.65
SMCHD1-205ENST00000581383 PRR26Q8N8Z3 221 aa4.73□□□□□ -1.65
SMCHD1-205ENST00000581383 NEXN-AS1Q8NBZ9 246 aa4.73□□□□□ -1.65
SMCHD1-205ENST00000581383 OIT3Q8WWZ8 545 aa4.73□□□□□ -1.65
SMCHD1-205ENST00000581383 RND1Q92730 232 aa4.73□□□□□ -1.65
SMCHD1-205ENST00000581383 SAT2Q96F10 170 aaPredicted RBP4.73□□□□□ -1.65
SMCHD1-205ENST00000581383 TXNDC15Q96J42 360 aa4.73□□□□□ -1.65
SMCHD1-205ENST00000581383 LRFN5Q96NI6 719 aa4.73□□□□□ -1.65
SMCHD1-205ENST00000581383 OR2A14Q96R47 310 aa4.73□□□□□ -1.65
SMCHD1-205ENST00000581383 SEPT5Q99719 369 aaPredicted RBP4.73□□□□□ -1.65
SMCHD1-205ENST00000581383 ANKEF1Q9NU02 776 aa4.73□□□□□ -1.65
SMCHD1-205ENST00000581383 HIF1ANQ9NWT6 349 aa4.73□□□□□ -1.65
SMCHD1-205ENST00000581383 CLIC5Q9NZA1 410 aa4.73□□□□□ -1.65
SMCHD1-205ENST00000581383 OGFRQ9NZT2 677 aa4.73□□□□□ -1.65
SMCHD1-205ENST00000581383 SUCLA2Q9P2R7 463 aaPredicted RBP4.73□□□□□ -1.65
SMCHD1-205ENST00000581383 CKAP5Q14008 2032 aa4.73□□□□□ -1.65
SMCHD1-205ENST00000581383 IGHV4-28A0A0C4DH34 117 aa4.72□□□□□ -1.65
SMCHD1-205ENST00000581383 hDV102S1A0JD36 115 aa4.72□□□□□ -1.65
SMCHD1-205ENST00000581383 B4DLN1 442 aa4.72□□□□□ -1.65
SMCHD1-205ENST00000581383 CTDSP2O14595 271 aa4.72□□□□□ -1.65
SMCHD1-205ENST00000581383 WNT9BO14905 357 aa4.72□□□□□ -1.65
SMCHD1-205ENST00000581383 ATP2A1O14983 1001 aa4.72□□□□□ -1.65
SMCHD1-205ENST00000581383 HSP90AA1P07900 732 aaKnown RBP4.72□□□□□ -1.65
SMCHD1-205ENST00000581383 NGFRP08138 427 aa4.72□□□□□ -1.65
SMCHD1-205ENST00000581383 SRPRAP08240 638 aaKnown RBP4.72□□□□□ -1.65
SMCHD1-205ENST00000581383 AKR1B1P15121 316 aa4.72□□□□□ -1.65
SMCHD1-205ENST00000581383 HOXD3P31249 432 aaPredicted RBP4.72□□□□□ -1.65
SMCHD1-205ENST00000581383 MRPL12P52815 198 aaKnown RBP4.72□□□□□ -1.65
SMCHD1-205ENST00000581383 PGGT1BP53609 377 aa4.72□□□□□ -1.65
SMCHD1-205ENST00000581383 MFAP4P55083 255 aa4.72□□□□□ -1.65
SMCHD1-205ENST00000581383 ZXDBP98169 803 aa4.72□□□□□ -1.65
SMCHD1-205ENST00000581383 TFAP4Q01664 338 aa4.72□□□□□ -1.65
SMCHD1-205ENST00000581383 STK4Q13043 487 aa4.72□□□□□ -1.65
SMCHD1-205ENST00000581383 ASIC2Q16515 512 aa4.72□□□□□ -1.65
SMCHD1-205ENST00000581383 MFSD4BQ5TF39 518 aa4.72□□□□□ -1.65
SMCHD1-205ENST00000581383 PMS2CLQ68D20 193 aa4.72□□□□□ -1.65
SMCHD1-205ENST00000581383 SLC36A4Q6YBV0 504 aa4.72□□□□□ -1.65
SMCHD1-205ENST00000581383 DPPA4Q7L190 304 aa4.72□□□□□ -1.65
SMCHD1-205ENST00000581383 GALNT5Q7Z7M9 940 aa4.72□□□□□ -1.65
SMCHD1-205ENST00000581383 RNF168Q8IYW5 571 aaPredicted RBP4.72□□□□□ -1.65
SMCHD1-205ENST00000581383 ADAMTS14Q8WXS8 1223 aa4.72□□□□□ -1.65
SMCHD1-205ENST00000581383 JAKMIP2Q96AA8 810 aa4.72□□□□□ -1.65
SMCHD1-205ENST00000581383 FEM1CQ96JP0 617 aa4.72□□□□□ -1.65
SMCHD1-205ENST00000581383 CTAGE1Q96RT6 745 aa4.72□□□□□ -1.65
SMCHD1-205ENST00000581383 GAD1Q99259 594 aa4.72□□□□□ -1.65
SMCHD1-205ENST00000581383 HAUS8Q9BT25 410 aa4.72□□□□□ -1.65
SMCHD1-205ENST00000581383 DCLK3Q9C098 648 aa4.72□□□□□ -1.65
SMCHD1-205ENST00000581383 CNGB3Q9NQW8 809 aa4.72□□□□□ -1.65
SMCHD1-205ENST00000581383 ACSS1Q9NUB1 689 aaPredicted RBP4.72□□□□□ -1.65
SMCHD1-205ENST00000581383 TXLNGQ9NUQ3 528 aa4.72□□□□□ -1.65
SMCHD1-205ENST00000581383 NRBP1Q9UHY1 535 aa4.72□□□□□ -1.65
SMCHD1-205ENST00000581383 TTC7AQ9ULT0 858 aaPredicted RBP4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms