RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 OCRLQ01968 901 aa12.69□□□□□ -0.38
CDK5RAP3-217ENST00000580287 NSUN2Q08J23 767 aaKnown RBP eCLIP12.69□□□□□ -0.38
CDK5RAP3-217ENST00000580287 UBAP2LQ14157 1087 aaKnown RBP12.69□□□□□ -0.38
CDK5RAP3-217ENST00000580287 KPNB1Q14974 876 aaKnown RBP12.69□□□□□ -0.38
CDK5RAP3-217ENST00000580287 C10orf107Q8IVU9 208 aa12.69□□□□□ -0.38
CDK5RAP3-217ENST00000580287 TEX9Q8N6V9 391 aa12.69□□□□□ -0.38
CDK5RAP3-217ENST00000580287 GRIN3AQ8TCU5 1115 aa12.69□□□□□ -0.38
CDK5RAP3-217ENST00000580287 PTCD3Q96EY7 689 aaKnown RBP12.69□□□□□ -0.38
CDK5RAP3-217ENST00000580287 HS3ST2Q9Y278 367 aa12.69□□□□□ -0.38
CDK5RAP3-217ENST00000580287 LRRC42Q9Y546 428 aa12.69□□□□□ -0.38
CDK5RAP3-217ENST00000580287 F5P12259 2224 aa12.68□□□□□ -0.38
CDK5RAP3-217ENST00000580287 A0A096LPK6 155 aa12.68□□□□□ -0.38
CDK5RAP3-217ENST00000580287 ANKRD66B4E2M5 251 aa12.68□□□□□ -0.38
CDK5RAP3-217ENST00000580287 GYG2O15488 501 aa12.68□□□□□ -0.38
CDK5RAP3-217ENST00000580287 KRT36O76013 467 aa12.68□□□□□ -0.38
CDK5RAP3-217ENST00000580287 TPBGLP0DKB5 382 aa12.68□□□□□ -0.38
CDK5RAP3-217ENST00000580287 HLA-EP13747 358 aa12.68□□□□□ -0.38
CDK5RAP3-217ENST00000580287 ARCN1P48444 511 aaKnown RBP12.68□□□□□ -0.38
CDK5RAP3-217ENST00000580287 LIMK2P53671 638 aa12.68□□□□□ -0.38
CDK5RAP3-217ENST00000580287 IRF9Q00978 393 aa12.68□□□□□ -0.38
CDK5RAP3-217ENST00000580287 ANO7Q6IWH7 933 aa12.68□□□□□ -0.38
CDK5RAP3-217ENST00000580287 C22orf39Q6P5X5 142 aa12.68□□□□□ -0.38
CDK5RAP3-217ENST00000580287 PTAR1Q7Z6K3 402 aaPredicted RBP12.68□□□□□ -0.38
CDK5RAP3-217ENST00000580287 MFSD6LQ8IWD5 586 aa12.68□□□□□ -0.38
CDK5RAP3-217ENST00000580287 ETFBKMTQ8IXQ9 262 aa12.68□□□□□ -0.38
CDK5RAP3-217ENST00000580287 PLD6Q8N2A8 252 aaKnown RBP12.68□□□□□ -0.38
CDK5RAP3-217ENST00000580287 OR2AP1Q8NGE2 309 aa12.68□□□□□ -0.38
CDK5RAP3-217ENST00000580287 HDAC10Q969S8 669 aa12.68□□□□□ -0.38
CDK5RAP3-217ENST00000580287 MYO19Q96H55 970 aa12.68□□□□□ -0.38
CDK5RAP3-217ENST00000580287 DNAJC1Q96KC8 554 aaKnown RBP12.68□□□□□ -0.38
CDK5RAP3-217ENST00000580287 TBATAQ96M53 351 aa12.68□□□□□ -0.38
CDK5RAP3-217ENST00000580287 ZDHHC6Q9H6R6 413 aa12.68□□□□□ -0.38
CDK5RAP3-217ENST00000580287 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.68□□□□□ -0.38
CDK5RAP3-217ENST00000580287 FBXO10Q9UK96 956 aa12.68□□□□□ -0.38
CDK5RAP3-217ENST00000580287 MEI4A8MW99 385 aa12.68□□□□□ -0.38
CDK5RAP3-217ENST00000580287 KCNA5P22460 613 aa12.68□□□□□ -0.38
CDK5RAP3-217ENST00000580287 CALB2P22676 271 aa12.68□□□□□ -0.38
CDK5RAP3-217ENST00000580287 MPP1Q00013 466 aa12.68□□□□□ -0.38
CDK5RAP3-217ENST00000580287 PTPRNQ16849 979 aa12.68□□□□□ -0.38
CDK5RAP3-217ENST00000580287 SMRP1Q8NCR6 262 aa12.68□□□□□ -0.38
CDK5RAP3-217ENST00000580287 OR6P1Q8NGX9 317 aa12.68□□□□□ -0.38
CDK5RAP3-217ENST00000580287 AGR3Q8TD06 166 aa12.68□□□□□ -0.38
CDK5RAP3-217ENST00000580287 INPP5DQ92835 1189 aa12.68□□□□□ -0.38
CDK5RAP3-217ENST00000580287 VPS39Q96JC1 886 aa12.68□□□□□ -0.38
CDK5RAP3-217ENST00000580287 MRGPRX3Q96LB0 322 aa12.68□□□□□ -0.38
CDK5RAP3-217ENST00000580287 PPP1R2P1Q96PQ5 205 aa12.68□□□□□ -0.38
CDK5RAP3-217ENST00000580287 TRPV4Q9HBA0 871 aa12.68□□□□□ -0.38
CDK5RAP3-217ENST00000580287 TREX1Q9NSU2 369 aa12.68□□□□□ -0.38
CDK5RAP3-217ENST00000580287 THAP1Q9NVV9 213 aa12.68□□□□□ -0.38
CDK5RAP3-217ENST00000580287 CPSF2Q9P2I0 782 aaKnown RBP12.68□□□□□ -0.38
CDK5RAP3-217ENST00000580287 ERVW-1Q9UQF0 538 aa12.68□□□□□ -0.38
CDK5RAP3-217ENST00000580287 DNAJC16Q9Y2G8 782 aa12.68□□□□□ -0.38
CDK5RAP3-217ENST00000580287 DPPA5A6NC42 116 aa12.67□□□□□ -0.38
CDK5RAP3-217ENST00000580287 GSC2O15499 205 aa12.67□□□□□ -0.38
CDK5RAP3-217ENST00000580287 GPR39O43194 453 aa12.67□□□□□ -0.38
CDK5RAP3-217ENST00000580287 HOXC11O43248 304 aaPredicted RBP12.67□□□□□ -0.38
CDK5RAP3-217ENST00000580287 NFATC1O95644 943 aa12.67□□□□□ -0.38
CDK5RAP3-217ENST00000580287 ESRRAP11474 423 aaPredicted RBP12.67□□□□□ -0.38
CDK5RAP3-217ENST00000580287 PSMC3P17980 439 aa12.67□□□□□ -0.38
CDK5RAP3-217ENST00000580287 HLA-DPA1P20036 260 aa12.67□□□□□ -0.38
CDK5RAP3-217ENST00000580287 GABRB3P28472 473 aa12.67□□□□□ -0.38
CDK5RAP3-217ENST00000580287 ARRB2P32121 409 aa12.67□□□□□ -0.38
CDK5RAP3-217ENST00000580287 SLC1A6P48664 564 aa12.67□□□□□ -0.38
CDK5RAP3-217ENST00000580287 RGS19P49795 217 aa12.67□□□□□ -0.38
CDK5RAP3-217ENST00000580287 EPHB1P54762 984 aa12.67□□□□□ -0.38
CDK5RAP3-217ENST00000580287 FCHO2Q0JRZ9 810 aa12.67□□□□□ -0.38
CDK5RAP3-217ENST00000580287 SLC12A1Q13621 1099 aa12.67□□□□□ -0.38
CDK5RAP3-217ENST00000580287 RUNX3Q13761 415 aa12.67□□□□□ -0.38
CDK5RAP3-217ENST00000580287 ITGA9Q13797 1035 aa12.67□□□□□ -0.38
CDK5RAP3-217ENST00000580287 PCLAFQ15004 111 aa12.67□□□□□ -0.38
CDK5RAP3-217ENST00000580287 ACSBG2Q5FVE4 666 aa12.67□□□□□ -0.38
CDK5RAP3-217ENST00000580287 ZNF789Q5FWF6 425 aa12.67□□□□□ -0.38
CDK5RAP3-217ENST00000580287 TSTD2Q5T7W7 516 aa12.67□□□□□ -0.38
CDK5RAP3-217ENST00000580287 THEMIS2Q5TEJ8 643 aa12.67□□□□□ -0.38
CDK5RAP3-217ENST00000580287 VWA5B1Q5TIE3 1220 aa12.67□□□□□ -0.38
CDK5RAP3-217ENST00000580287 YAF2Q8IY57 180 aa12.67□□□□□ -0.38
CDK5RAP3-217ENST00000580287 AHI1Q8N157 1196 aa12.67□□□□□ -0.38
CDK5RAP3-217ENST00000580287 EID2BQ96D98 161 aa12.67□□□□□ -0.38
CDK5RAP3-217ENST00000580287 WWP1Q9H0M0 922 aa12.67□□□□□ -0.38
CDK5RAP3-217ENST00000580287 THG1LQ9NWX6 298 aaKnown RBP12.67□□□□□ -0.38
CDK5RAP3-217ENST00000580287 DEC1Q9P2X7 70 aa12.67□□□□□ -0.38
CDK5RAP3-217ENST00000580287 SLC25A13Q9UJS0 675 aa12.67□□□□□ -0.38
CDK5RAP3-217ENST00000580287 MUC3AQ02505 3323 aa12.67□□□□□ -0.38
CDK5RAP3-217ENST00000580287 HEATR9A2RTY3 570 aa12.67□□□□□ -0.38
CDK5RAP3-217ENST00000580287 AP3B1O00203 1094 aa12.67□□□□□ -0.38
CDK5RAP3-217ENST00000580287 TRAFD1O14545 582 aaPredicted RBP12.67□□□□□ -0.38
CDK5RAP3-217ENST00000580287 PHGDHO43175 533 aaKnown RBP12.67□□□□□ -0.38
CDK5RAP3-217ENST00000580287 TIMM44O43615 452 aa12.67□□□□□ -0.38
CDK5RAP3-217ENST00000580287 GSRP00390 522 aa12.67□□□□□ -0.38
CDK5RAP3-217ENST00000580287 EPOP01588 193 aa12.67□□□□□ -0.38
CDK5RAP3-217ENST00000580287 PROCP04070 461 aa12.67□□□□□ -0.38
CDK5RAP3-217ENST00000580287 FGF1P05230 155 aa12.67□□□□□ -0.38
CDK5RAP3-217ENST00000580287 UGT2B4P06133 528 aa12.67□□□□□ -0.38
CDK5RAP3-217ENST00000580287 FGF3P11487 239 aaPredicted RBP12.67□□□□□ -0.38
CDK5RAP3-217ENST00000580287 GJA4P35212 333 aa12.67□□□□□ -0.38
CDK5RAP3-217ENST00000580287 PTDSS1P48651 473 aaKnown RBP12.67□□□□□ -0.38
CDK5RAP3-217ENST00000580287 BCL2L1Q07817 233 aa12.67□□□□□ -0.38
CDK5RAP3-217ENST00000580287 PEX6Q13608 980 aa12.67□□□□□ -0.38
CDK5RAP3-217ENST00000580287 GRM3Q14832 879 aa12.67□□□□□ -0.38
CDK5RAP3-217ENST00000580287 MYLK3Q32MK0 819 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms