RNA–Protein interactions for RNA: ENST00000579531.5

MSI2-211, Transcript of musashi RNA binding protein 2, human

TSL 2

Gene MSI2, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-211	ENST00000579531	FCRLB	Q6BAA4	426 aa		4.16	□□□□□ -1.74
MSI2-211	ENST00000579531	SNRNP48	Q6IEG0	339 aa	Known RBP	4.16	□□□□□ -1.74
MSI2-211	ENST00000579531	FBXO46	Q6PJ61	603 aa	Predicted RBP	4.16	□□□□□ -1.74
MSI2-211	ENST00000579531	MOXD1	Q6UVY6	613 aa		4.16	□□□□□ -1.74
MSI2-211	ENST00000579531	CHST3	Q7LGC8	479 aa		4.16	□□□□□ -1.74
MSI2-211	ENST00000579531	NIPA1	Q7RTP0	329 aa		4.16	□□□□□ -1.74
MSI2-211	ENST00000579531	MAATS1	Q7Z4T9	603 aa		4.16	□□□□□ -1.74
MSI2-211	ENST00000579531	GPR142	Q7Z601	462 aa		4.16	□□□□□ -1.74
MSI2-211	ENST00000579531	CTU1	Q7Z7A3	348 aa	Known RBP	4.16	□□□□□ -1.74
MSI2-211	ENST00000579531	BRSK2	Q8IWQ3	736 aa		4.16	□□□□□ -1.74
MSI2-211	ENST00000579531	ADGRF3	Q8IZF5	1079 aa		4.16	□□□□□ -1.74
MSI2-211	ENST00000579531		Q8N1X5	172 aa		4.16	□□□□□ -1.74
MSI2-211	ENST00000579531	SRBD1	Q8N5C6	995 aa	Known RBP	4.16	□□□□□ -1.74
MSI2-211	ENST00000579531	ARL6IP6	Q8N6S5	226 aa		4.16	□□□□□ -1.74
MSI2-211	ENST00000579531	FAM133A	Q8N9E0	248 aa		4.16	□□□□□ -1.74
MSI2-211	ENST00000579531	TNIP2	Q8NFZ5	429 aa		4.16	□□□□□ -1.74
MSI2-211	ENST00000579531	GABPB2	Q8TAK5	448 aa	Predicted RBP	4.16	□□□□□ -1.74
MSI2-211	ENST00000579531	CLEC4C	Q8WTT0	213 aa		4.16	□□□□□ -1.74
MSI2-211	ENST00000579531	CUL5	Q93034	780 aa		4.16	□□□□□ -1.74
MSI2-211	ENST00000579531	ATP2A3	Q93084	1043 aa		4.16	□□□□□ -1.74
MSI2-211	ENST00000579531	RSRC1	Q96IZ7	334 aa	Known RBP	4.16	□□□□□ -1.74
MSI2-211	ENST00000579531	C7orf26	Q96N11	449 aa		4.16	□□□□□ -1.74
MSI2-211	ENST00000579531	GPR78	Q96P69	363 aa		4.16	□□□□□ -1.74
MSI2-211	ENST00000579531	BAG1	Q99933	345 aa	Predicted RBP	4.16	□□□□□ -1.74
MSI2-211	ENST00000579531	FUZ	Q9BT04	418 aa		4.16	□□□□□ -1.74
MSI2-211	ENST00000579531	MOV10L1	Q9BXT6	1211 aa	Known RBP	4.16	□□□□□ -1.74
MSI2-211	ENST00000579531	UPF3B	Q9BZI7	483 aa	Known RBP	4.16	□□□□□ -1.74
MSI2-211	ENST00000579531	CLPB	Q9H078	707 aa		4.16	□□□□□ -1.74
MSI2-211	ENST00000579531	KLK15	Q9H2R5	256 aa		4.16	□□□□□ -1.74
MSI2-211	ENST00000579531	STN1	Q9H668	368 aa	Known RBP	4.16	□□□□□ -1.74
MSI2-211	ENST00000579531	BEX4	Q9NWD9	120 aa	Predicted RBP	4.16	□□□□□ -1.74
MSI2-211	ENST00000579531	QPCTL	Q9NXS2	382 aa		4.16	□□□□□ -1.74
MSI2-211	ENST00000579531	HCN3	Q9P1Z3	774 aa		4.16	□□□□□ -1.74
MSI2-211	ENST00000579531	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	4.16	□□□□□ -1.74
MSI2-211	ENST00000579531	ZMAT5	Q9UDW3	170 aa	Known RBP	4.16	□□□□□ -1.74
MSI2-211	ENST00000579531	PCSK1N	Q9UHG2	260 aa		4.16	□□□□□ -1.74
MSI2-211	ENST00000579531	IPO11	Q9UI26	975 aa	Known RBP	4.16	□□□□□ -1.74
MSI2-211	ENST00000579531	CCPG1	Q9ULG6	757 aa		4.16	□□□□□ -1.74
MSI2-211	ENST00000579531	DTX4	Q9Y2E6	619 aa		4.16	□□□□□ -1.74
MSI2-211	ENST00000579531		Q9Y3F1	56 aa		4.16	□□□□□ -1.74
MSI2-211	ENST00000579531	PKP3	Q9Y446	797 aa		4.16	□□□□□ -1.74
MSI2-211	ENST00000579531	UQCRHL	A0A096LP55	91 aa		4.15	□□□□□ -1.75
MSI2-211	ENST00000579531	NPIPB13	A6NJU9	1138 aa		4.15	□□□□□ -1.75
MSI2-211	ENST00000579531	SH2D7	A6NKC9	451 aa	Predicted RBP	4.15	□□□□□ -1.75
MSI2-211	ENST00000579531	NPIPB5	A8MRT5	1133 aa		4.15	□□□□□ -1.75
MSI2-211	ENST00000579531	NPIPB4	C9JG80	1138 aa		4.15	□□□□□ -1.75
MSI2-211	ENST00000579531	MGST3	O14880	152 aa		4.15	□□□□□ -1.75
MSI2-211	ENST00000579531	DSCR3	O14972	297 aa		4.15	□□□□□ -1.75
MSI2-211	ENST00000579531	MTRF1	O75570	445 aa	Known RBP	4.15	□□□□□ -1.75
MSI2-211	ENST00000579531	RNASEH2A	O75792	299 aa	Known RBP	4.15	□□□□□ -1.75
MSI2-211	ENST00000579531	BAIAP3	O94812	1187 aa		4.15	□□□□□ -1.75
MSI2-211	ENST00000579531	LCK	P06239	509 aa		4.15	□□□□□ -1.75
MSI2-211	ENST00000579531	UQCRH	P07919	91 aa		4.15	□□□□□ -1.75
MSI2-211	ENST00000579531	HNRNPA1	P09651	372 aa	Known RBP eCLIP	4.15	□□□□□ -1.75
MSI2-211	ENST00000579531	RFPL3S	P0C7P2	107 aa		4.15	□□□□□ -1.75
MSI2-211	ENST00000579531	POLR2M	P0CAP2	368 aa		4.15	□□□□□ -1.75
MSI2-211	ENST00000579531	HSPA1A	P0DMV8	641 aa	Known RBP	4.15	□□□□□ -1.75
MSI2-211	ENST00000579531	HSPA1B	P0DMV9	641 aa	Known RBP	4.15	□□□□□ -1.75
MSI2-211	ENST00000579531	PRPH2	P23942	346 aa		4.15	□□□□□ -1.75
MSI2-211	ENST00000579531	PRKCH	P24723	683 aa		4.15	□□□□□ -1.75
MSI2-211	ENST00000579531	GJC1	P36383	396 aa		4.15	□□□□□ -1.75
MSI2-211	ENST00000579531	PLA2G5	P39877	138 aa		4.15	□□□□□ -1.75
MSI2-211	ENST00000579531	BUD31	P41223	144 aa	Predicted RBP	4.15	□□□□□ -1.75
MSI2-211	ENST00000579531	PSMC4	P43686	418 aa		4.15	□□□□□ -1.75
MSI2-211	ENST00000579531	CBX1	P83916	185 aa		4.15	□□□□□ -1.75
MSI2-211	ENST00000579531	B4GALNT1	Q00973	533 aa		4.15	□□□□□ -1.75
MSI2-211	ENST00000579531	SLC10A2	Q12908	348 aa	Predicted RBP	4.15	□□□□□ -1.75
MSI2-211	ENST00000579531	IK	Q13123	557 aa	Predicted RBP	4.15	□□□□□ -1.75
MSI2-211	ENST00000579531	SLC14A1	Q13336	389 aa		4.15	□□□□□ -1.75
MSI2-211	ENST00000579531	BECN1	Q14457	450 aa		4.15	□□□□□ -1.75
MSI2-211	ENST00000579531	TAF11	Q15544	211 aa		4.15	□□□□□ -1.75
MSI2-211	ENST00000579531	C10orf76	Q5T2E6	689 aa		4.15	□□□□□ -1.75
MSI2-211	ENST00000579531	ATL3	Q6DD88	541 aa		4.15	□□□□□ -1.75
MSI2-211	ENST00000579531	ACAD10	Q6JQN1	1059 aa		4.15	□□□□□ -1.75
MSI2-211	ENST00000579531	ZNF474	Q6S9Z5	364 aa	Predicted RBP	4.15	□□□□□ -1.75
MSI2-211	ENST00000579531	CCDC80	Q76M96	950 aa		4.15	□□□□□ -1.75
MSI2-211	ENST00000579531	TMEM200A	Q86VY9	491 aa		4.15	□□□□□ -1.75
MSI2-211	ENST00000579531	RFX6	Q8HWS3	928 aa		4.15	□□□□□ -1.75
MSI2-211	ENST00000579531	LRRC49	Q8IUZ0	686 aa		4.15	□□□□□ -1.75
MSI2-211	ENST00000579531	SCN4B	Q8IWT1	228 aa		4.15	□□□□□ -1.75
MSI2-211	ENST00000579531	CCDC65	Q8IXS2	484 aa		4.15	□□□□□ -1.75
MSI2-211	ENST00000579531	PAQR4	Q8N4S7	273 aa	Predicted RBP	4.15	□□□□□ -1.75
MSI2-211	ENST00000579531	TRIML1	Q8N9V2	468 aa		4.15	□□□□□ -1.75
MSI2-211	ENST00000579531	DRAXIN	Q8NBI3	349 aa	Predicted RBP	4.15	□□□□□ -1.75
MSI2-211	ENST00000579531	RFWD2	Q8NHY2	731 aa		4.15	□□□□□ -1.75
MSI2-211	ENST00000579531	CCDC26	Q8TAB7	109 aa		4.15	□□□□□ -1.75
MSI2-211	ENST00000579531	CRYGN	Q8WXF5	182 aa		4.15	□□□□□ -1.75
MSI2-211	ENST00000579531	ERP27	Q96DN0	273 aa		4.15	□□□□□ -1.75
MSI2-211	ENST00000579531	BICD1	Q96G01	975 aa		4.15	□□□□□ -1.75
MSI2-211	ENST00000579531	RITA1	Q96K30	269 aa		4.15	□□□□□ -1.75
MSI2-211	ENST00000579531	FAM81B	Q96LP2	452 aa		4.15	□□□□□ -1.75
MSI2-211	ENST00000579531	GSDMA	Q96QA5	445 aa		4.15	□□□□□ -1.75
MSI2-211	ENST00000579531	MACROD1	Q9BQ69	325 aa		4.15	□□□□□ -1.75
MSI2-211	ENST00000579531	CRACR2A	Q9BSW2	395 aa		4.15	□□□□□ -1.75
MSI2-211	ENST00000579531	SEMA4C	Q9C0C4	833 aa		4.15	□□□□□ -1.75
MSI2-211	ENST00000579531	FOXP1	Q9H334	677 aa	Predicted RBP	4.15	□□□□□ -1.75
MSI2-211	ENST00000579531	PSTPIP2	Q9H939	334 aa		4.15	□□□□□ -1.75
MSI2-211	ENST00000579531	C6orf50	Q9HD87	102 aa		4.15	□□□□□ -1.75
MSI2-211	ENST00000579531	TXNRD2	Q9NNW7	524 aa		4.15	□□□□□ -1.75
MSI2-211	ENST00000579531	RNF146	Q9NTX7	359 aa		4.15	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms