RNA–Protein interactions for RNA: ENST00000579289.1

SUPT4H1-203, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

TSL 3

Gene SUPT4H1, Length 318 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-203ENST00000579289 ANO10Q9NW15 660 aa11.13□□□□□ -0.63
SUPT4H1-203ENST00000579289 OGFRQ9NZT2 677 aa11.13□□□□□ -0.63
SUPT4H1-203ENST00000579289 TMEM63CQ9P1W3 806 aa11.13□□□□□ -0.63
SUPT4H1-203ENST00000579289 RCOR3Q9P2K3 495 aaPredicted RBP11.13□□□□□ -0.63
SUPT4H1-203ENST00000579289 POLHQ9Y253 713 aa11.13□□□□□ -0.63
SUPT4H1-203ENST00000579289 FHOD1Q9Y613 1164 aa11.13□□□□□ -0.63
SUPT4H1-203ENST00000579289 ZNF469Q96JG9 3925 aaPredicted RBP11.13□□□□□ -0.63
SUPT4H1-203ENST00000579289 ZSCAN5CA6NGD5 496 aaPredicted RBP11.12□□□□□ -0.63
SUPT4H1-203ENST00000579289 A8MU76 341 aa11.12□□□□□ -0.63
SUPT4H1-203ENST00000579289 IVLP07476 585 aa11.12□□□□□ -0.63
SUPT4H1-203ENST00000579289 KELP23276 732 aa11.12□□□□□ -0.63
SUPT4H1-203ENST00000579289 CSNK1DP48730 415 aa11.12□□□□□ -0.63
SUPT4H1-203ENST00000579289 PTK2Q05397 1052 aa11.12□□□□□ -0.63
SUPT4H1-203ENST00000579289 RAPGEF1Q13905 1077 aa11.12□□□□□ -0.63
SUPT4H1-203ENST00000579289 TSR1Q2NL82 804 aaKnown RBP11.12□□□□□ -0.63
SUPT4H1-203ENST00000579289 CCDC14Q49A88 953 aa11.12□□□□□ -0.63
SUPT4H1-203ENST00000579289 KLHDC7AQ5VTJ3 777 aa11.12□□□□□ -0.63
SUPT4H1-203ENST00000579289 JMJD6Q6NYC1 403 aaPredicted RBP11.12□□□□□ -0.63
SUPT4H1-203ENST00000579289 BRAT1Q6PJG6 821 aa11.12□□□□□ -0.63
SUPT4H1-203ENST00000579289 FAM71AQ8IYT1 594 aa11.12□□□□□ -0.63
SUPT4H1-203ENST00000579289 CCDC185Q8N715 623 aa11.12□□□□□ -0.63
SUPT4H1-203ENST00000579289 EMC1Q8N766 993 aa11.12□□□□□ -0.63
SUPT4H1-203ENST00000579289 EFCAB3Q8N7B9 438 aa11.12□□□□□ -0.63
SUPT4H1-203ENST00000579289 RBMXL3Q8N7X1 1067 aaKnown RBP11.12□□□□□ -0.63
SUPT4H1-203ENST00000579289 MN1Q10571 1320 aaPredicted RBP11.11□□□□□ -0.63
SUPT4H1-203ENST00000579289 WASH4PA8MWX3 477 aa11.11□□□□□ -0.63
SUPT4H1-203ENST00000579289 J3KR12 359 aa11.11□□□□□ -0.63
SUPT4H1-203ENST00000579289 POLR1CO15160 346 aaPredicted RBP11.11□□□□□ -0.63
SUPT4H1-203ENST00000579289 TEX33O43247 280 aa11.11□□□□□ -0.63
SUPT4H1-203ENST00000579289 CREG1O75629 220 aa11.11□□□□□ -0.63
SUPT4H1-203ENST00000579289 C9P02748 559 aa11.11□□□□□ -0.63
SUPT4H1-203ENST00000579289 ANKRD34CP0C6C1 535 aa11.11□□□□□ -0.63
SUPT4H1-203ENST00000579289 UCHL3P15374 230 aa11.11□□□□□ -0.63
SUPT4H1-203ENST00000579289 GNPDA1P46926 289 aa11.11□□□□□ -0.63
SUPT4H1-203ENST00000579289 KLK7P49862 253 aa11.11□□□□□ -0.63
SUPT4H1-203ENST00000579289 HDAC4P56524 1084 aa11.11□□□□□ -0.63
SUPT4H1-203ENST00000579289 CDK3Q00526 305 aa11.11□□□□□ -0.63
SUPT4H1-203ENST00000579289 MYL5Q02045 173 aa11.11□□□□□ -0.63
SUPT4H1-203ENST00000579289 RAD51Q06609 339 aa11.11□□□□□ -0.63
SUPT4H1-203ENST00000579289 ILF3Q12906 894 aaKnown RBP eCLIP11.11□□□□□ -0.63
SUPT4H1-203ENST00000579289 PTPRRQ15256 657 aa11.11□□□□□ -0.63
SUPT4H1-203ENST00000579289 CNGA3Q16281 694 aa11.11□□□□□ -0.63
SUPT4H1-203ENST00000579289 C15orf59Q2T9L4 293 aaPredicted RBP11.11□□□□□ -0.63
SUPT4H1-203ENST00000579289 FAM102AQ5T9C2 384 aaPredicted RBP11.11□□□□□ -0.63
SUPT4H1-203ENST00000579289 SMYD5Q6GMV2 418 aa11.11□□□□□ -0.63
SUPT4H1-203ENST00000579289 DNAAF5Q86Y56 855 aa11.11□□□□□ -0.63
SUPT4H1-203ENST00000579289 PYROXD2Q8N2H3 581 aa11.11□□□□□ -0.63
SUPT4H1-203ENST00000579289 RTL3Q8N8U3 475 aaKnown RBP11.11□□□□□ -0.63
SUPT4H1-203ENST00000579289 GALNT6Q8NCL4 622 aa11.11□□□□□ -0.63
SUPT4H1-203ENST00000579289 PRR7Q8TB68 274 aa11.11□□□□□ -0.63
SUPT4H1-203ENST00000579289 NAA15Q9BXJ9 866 aaKnown RBP11.11□□□□□ -0.63
SUPT4H1-203ENST00000579289 LRRC19Q9H756 370 aa11.11□□□□□ -0.63
SUPT4H1-203ENST00000579289 TMEM51Q9NW97 253 aa11.11□□□□□ -0.63
SUPT4H1-203ENST00000579289 TRBV23OR9-2A0A075B6M9 112 aa11.1□□□□□ -0.63
SUPT4H1-203ENST00000579289 FAM170AA1A519 330 aa11.1□□□□□ -0.63
SUPT4H1-203ENST00000579289 CDC14CA4D256 554 aa11.1□□□□□ -0.63
SUPT4H1-203ENST00000579289 RASA4BC9J798 803 aa11.1□□□□□ -0.63
SUPT4H1-203ENST00000579289 RASA4O43374 803 aa11.1□□□□□ -0.63
SUPT4H1-203ENST00000579289 KRT86O43790 486 aa11.1□□□□□ -0.63
SUPT4H1-203ENST00000579289 TIAF1O95411 115 aa11.1□□□□□ -0.63
SUPT4H1-203ENST00000579289 TPM2P07951 284 aa11.1□□□□□ -0.63
SUPT4H1-203ENST00000579289 PLEKP08567 350 aaPredicted RBP11.1□□□□□ -0.63
SUPT4H1-203ENST00000579289 TNFAIP3P21580 790 aa11.1□□□□□ -0.63
SUPT4H1-203ENST00000579289 LHCGRP22888 699 aa11.1□□□□□ -0.63
SUPT4H1-203ENST00000579289 TEAD1P28347 426 aa11.1□□□□□ -0.63
SUPT4H1-203ENST00000579289 KRT9P35527 623 aa11.1□□□□□ -0.63
SUPT4H1-203ENST00000579289 SH3BP2P78314 561 aa11.1□□□□□ -0.63
SUPT4H1-203ENST00000579289 TYRO3Q06418 890 aa11.1□□□□□ -0.63
SUPT4H1-203ENST00000579289 CHAF1BQ13112 559 aa11.1□□□□□ -0.63
SUPT4H1-203ENST00000579289 PYCR3Q53H96 274 aa11.1□□□□□ -0.63
SUPT4H1-203ENST00000579289 SNAP47Q5SQN1 464 aa11.1□□□□□ -0.63
SUPT4H1-203ENST00000579289 ERAP2Q6P179 960 aa11.1□□□□□ -0.63
SUPT4H1-203ENST00000579289 C6orf15Q6UXA7 325 aaPredicted RBP11.1□□□□□ -0.63
SUPT4H1-203ENST00000579289 RFLNAQ6ZTI6 216 aa11.1□□□□□ -0.63
SUPT4H1-203ENST00000579289 LYSMD3Q7Z3D4 306 aa11.1□□□□□ -0.63
SUPT4H1-203ENST00000579289 KDELC2Q7Z4H8 507 aa11.1□□□□□ -0.63
SUPT4H1-203ENST00000579289 UMODL1-AS1Q8N2C9 162 aa11.1□□□□□ -0.63
SUPT4H1-203ENST00000579289 TSEN2Q8NCE0 465 aaKnown RBP11.1□□□□□ -0.63
SUPT4H1-203ENST00000579289 ADAMTS17Q8TE56 1095 aa11.1□□□□□ -0.63
SUPT4H1-203ENST00000579289 C18orf8Q96DM3 657 aa11.1□□□□□ -0.63
SUPT4H1-203ENST00000579289 TUBGCP5Q96RT8 1024 aa11.1□□□□□ -0.63
SUPT4H1-203ENST00000579289 STK33Q9BYT3 514 aa11.1□□□□□ -0.63
SUPT4H1-203ENST00000579289 UNKQ9C0B0 810 aaKnown RBP11.1□□□□□ -0.63
SUPT4H1-203ENST00000579289 GANQ9H2C0 597 aa11.1□□□□□ -0.63
SUPT4H1-203ENST00000579289 B4GALT6Q9UBX8 382 aa11.1□□□□□ -0.63
SUPT4H1-203ENST00000579289 MOSPD1Q9UJG1 213 aa11.1□□□□□ -0.63
SUPT4H1-203ENST00000579289 KCND3Q9UK17 655 aa11.1□□□□□ -0.63
SUPT4H1-203ENST00000579289 HPCAL4Q9UM19 191 aa11.1□□□□□ -0.63
SUPT4H1-203ENST00000579289 C2CD4BA6NLJ0 364 aa11.09□□□□□ -0.63
SUPT4H1-203ENST00000579289 A8MX80 341 aa11.09□□□□□ -0.63
SUPT4H1-203ENST00000579289 EPHB6O15197 1021 aa11.09□□□□□ -0.63
SUPT4H1-203ENST00000579289 ELFN1P0C7U0 828 aa11.09□□□□□ -0.63
SUPT4H1-203ENST00000579289 FGF5P12034 268 aa11.09□□□□□ -0.63
SUPT4H1-203ENST00000579289 CYP11B1P15538 503 aa11.09□□□□□ -0.63
SUPT4H1-203ENST00000579289 NFKBIAP25963 317 aa11.09□□□□□ -0.63
SUPT4H1-203ENST00000579289 ACTR1BP42025 376 aa11.09□□□□□ -0.63
SUPT4H1-203ENST00000579289 COPB1P53618 953 aaKnown RBP11.09□□□□□ -0.63
SUPT4H1-203ENST00000579289 GFERP55789 205 aa11.09□□□□□ -0.63
SUPT4H1-203ENST00000579289 YBEYP58557 167 aaPredicted RBP11.09□□□□□ -0.63
SUPT4H1-203ENST00000579289 BPIFB4P59827 614 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms