RNA–Protein interactions for RNA: ENST00000578987.1

NUP85-209, Transcript of nucleoporin 85, humanhuman

TSL 3

Gene NUP85, Length 388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-209ENST00000578987 RCCD1A6NED2 376 aa3.83□□□□□ -1.8
NUP85-209ENST00000578987 NPIPB15A6NHN6 443 aaPredicted RBP3.83□□□□□ -1.8
NUP85-209ENST00000578987 LRRC53A6NM62 1247 aa3.83□□□□□ -1.8
NUP85-209ENST00000578987 EFCAB7A8K855 629 aa3.83□□□□□ -1.8
NUP85-209ENST00000578987 LGALS16A8MUM7 142 aa3.83□□□□□ -1.8
NUP85-209ENST00000578987 DDX3XO00571 662 aaKnown RBP eCLIP3.83□□□□□ -1.8
NUP85-209ENST00000578987 TNFRSF10CO14798 259 aa3.83□□□□□ -1.8
NUP85-209ENST00000578987 FGF10O15520 208 aaPredicted RBP3.83□□□□□ -1.8
NUP85-209ENST00000578987 NKX2-8O15522 239 aa3.83□□□□□ -1.8
NUP85-209ENST00000578987 SUV39H1O43463 412 aa3.83□□□□□ -1.8
NUP85-209ENST00000578987 NUDT21O43809 227 aaKnown RBP3.83□□□□□ -1.8
NUP85-209ENST00000578987 PRPSAP2O60256 369 aa3.83□□□□□ -1.8
NUP85-209ENST00000578987 MAFKO60675 156 aa3.83□□□□□ -1.8
NUP85-209ENST00000578987 SNX2O60749 519 aa3.83□□□□□ -1.8
NUP85-209ENST00000578987 LRCH4O75427 683 aa3.83□□□□□ -1.8
NUP85-209ENST00000578987 RNF8O76064 485 aa3.83□□□□□ -1.8
NUP85-209ENST00000578987 ASMTLO95671 621 aa3.83□□□□□ -1.8
NUP85-209ENST00000578987 CPNE6O95741 557 aa3.83□□□□□ -1.8
NUP85-209ENST00000578987 CPP00450 1065 aa3.83□□□□□ -1.8
NUP85-209ENST00000578987 ATP1A1P05023 1023 aaKnown RBP3.83□□□□□ -1.8
NUP85-209ENST00000578987 HOXC4P09017 264 aaPredicted RBP3.83□□□□□ -1.8
NUP85-209ENST00000578987 PRKAR1AP10644 381 aa3.83□□□□□ -1.8
NUP85-209ENST00000578987 ATP1A3P13637 1013 aa3.83□□□□□ -1.8
NUP85-209ENST00000578987 LIFP15018 202 aa3.83□□□□□ -1.8
NUP85-209ENST00000578987 PNLIPP16233 465 aa3.83□□□□□ -1.8
NUP85-209ENST00000578987 FERP16591 822 aa3.83□□□□□ -1.8
NUP85-209ENST00000578987 LHCGRP22888 699 aa3.83□□□□□ -1.8
NUP85-209ENST00000578987 KELP23276 732 aa3.83□□□□□ -1.8
NUP85-209ENST00000578987 IL1R2P27930 398 aa3.83□□□□□ -1.8
NUP85-209ENST00000578987 MAPK1P28482 360 aa3.83□□□□□ -1.8
NUP85-209ENST00000578987 VIPR1P32241 457 aa3.83□□□□□ -1.8
NUP85-209ENST00000578987 UGT1A3P35503 534 aa3.83□□□□□ -1.8
NUP85-209ENST00000578987 MAPK9P45984 424 aa3.83□□□□□ -1.8
NUP85-209ENST00000578987 GPR1P46091 355 aa3.83□□□□□ -1.8
NUP85-209ENST00000578987 SUOXP51687 545 aa3.83□□□□□ -1.8
NUP85-209ENST00000578987 LIMK2P53671 638 aa3.83□□□□□ -1.8
NUP85-209ENST00000578987 AIF1P55008 147 aa3.83□□□□□ -1.8
NUP85-209ENST00000578987 GSCP56915 257 aaPredicted RBP3.83□□□□□ -1.8
NUP85-209ENST00000578987 KIAA1024LP59773 190 aa3.83□□□□□ -1.8
NUP85-209ENST00000578987 POLR2LP62875 67 aaKnown RBP3.83□□□□□ -1.8
NUP85-209ENST00000578987 CDK3Q00526 305 aa3.83□□□□□ -1.8
NUP85-209ENST00000578987 PTSQ03393 145 aa3.83□□□□□ -1.8
NUP85-209ENST00000578987 NSUN2Q08J23 767 aaKnown RBP eCLIP3.83□□□□□ -1.8
NUP85-209ENST00000578987 NFATC2Q13469 925 aa3.83□□□□□ -1.8
NUP85-209ENST00000578987 IHHQ14623 411 aa3.83□□□□□ -1.8
NUP85-209ENST00000578987 NR1I3Q14994 352 aa3.83□□□□□ -1.8
NUP85-209ENST00000578987 SKIDA1Q1XH10 827 aa3.83□□□□□ -1.8
NUP85-209ENST00000578987 FILIP1LQ4L180 1135 aa3.83□□□□□ -1.8
NUP85-209ENST00000578987 ATP13A4Q4VNC1 1196 aa3.83□□□□□ -1.8
NUP85-209ENST00000578987 CRTC2Q53ET0 693 aaPredicted RBP3.83□□□□□ -1.8
NUP85-209ENST00000578987 CERCAMQ5T4B2 595 aa3.83□□□□□ -1.8
NUP85-209ENST00000578987 ZNF648Q5T619 568 aaPredicted RBP3.83□□□□□ -1.8
NUP85-209ENST00000578987 ATP1A1-AS1Q5TC04 95 aa3.83□□□□□ -1.8
NUP85-209ENST00000578987 E4F1Q66K89 784 aaPredicted RBP3.83□□□□□ -1.8
NUP85-209ENST00000578987 ANKS6Q68DC2 871 aa3.83□□□□□ -1.8
NUP85-209ENST00000578987 RAET1GQ6H3X3 334 aa3.83□□□□□ -1.8
NUP85-209ENST00000578987 PLEKHA7Q6IQ23 1121 aa3.83□□□□□ -1.8
NUP85-209ENST00000578987 ATG14Q6ZNE5 492 aa3.83□□□□□ -1.8
NUP85-209ENST00000578987 B4GALNT4Q76KP1 1039 aa3.83□□□□□ -1.8
NUP85-209ENST00000578987 DPPA4Q7L190 304 aa3.83□□□□□ -1.8
NUP85-209ENST00000578987 APTXQ7Z2E3 356 aaKnown RBP3.83□□□□□ -1.8
NUP85-209ENST00000578987 ZNF571Q7Z3V5 609 aaPredicted RBP3.83□□□□□ -1.8
NUP85-209ENST00000578987 TECPR1Q7Z6L1 1165 aa3.83□□□□□ -1.8
NUP85-209ENST00000578987 LUZP1Q86V48 1076 aa3.83□□□□□ -1.8
NUP85-209ENST00000578987 C17orf82Q86X59 251 aaPredicted RBP3.83□□□□□ -1.8
NUP85-209ENST00000578987 FAM129CQ86XR2 697 aa3.83□□□□□ -1.8
NUP85-209ENST00000578987 DTX1Q86Y01 620 aa3.83□□□□□ -1.8
NUP85-209ENST00000578987 CPNE8Q86YQ8 564 aa3.83□□□□□ -1.8
NUP85-209ENST00000578987 AOPEPQ8N6M6 819 aa3.83□□□□□ -1.8
NUP85-209ENST00000578987 ZSCAN1Q8NBB4 408 aa3.83□□□□□ -1.8
NUP85-209ENST00000578987 OR6C4Q8NGE1 309 aa3.83□□□□□ -1.8
NUP85-209ENST00000578987 ATL2Q8NHH9 583 aa3.83□□□□□ -1.8
NUP85-209ENST00000578987 GPBAR1Q8TDU6 330 aa3.83□□□□□ -1.8
NUP85-209ENST00000578987 PIH1D2Q8WWB5 315 aa3.83□□□□□ -1.8
NUP85-209ENST00000578987 NCSTNQ92542 709 aa3.83□□□□□ -1.8
NUP85-209ENST00000578987 SCAMP4Q969E2 229 aa3.83□□□□□ -1.8
NUP85-209ENST00000578987 NUS1Q96E22 293 aa3.83□□□□□ -1.8
NUP85-209ENST00000578987 TAAR9Q96RI9 348 aa3.83□□□□□ -1.8
NUP85-209ENST00000578987 ERGIC2Q96RQ1 377 aa3.83□□□□□ -1.8
NUP85-209ENST00000578987 CMKLR1Q99788 373 aa3.83□□□□□ -1.8
NUP85-209ENST00000578987 CTRCQ99895 268 aa3.83□□□□□ -1.8
NUP85-209ENST00000578987 TEX101Q9BY14 249 aa3.83□□□□□ -1.8
NUP85-209ENST00000578987 FRMD8Q9BZ67 464 aaPredicted RBP3.83□□□□□ -1.8
NUP85-209ENST00000578987 TGIF2Q9GZN2 237 aa3.83□□□□□ -1.8
NUP85-209ENST00000578987 HAUS4Q9H6D7 363 aa3.83□□□□□ -1.8
NUP85-209ENST00000578987 WDR26Q9H7D7 661 aa3.83□□□□□ -1.8
NUP85-209ENST00000578987 APMAPQ9HDC9 416 aa3.83□□□□□ -1.8
NUP85-209ENST00000578987 ARFGAP3Q9NP61 516 aa3.83□□□□□ -1.8
NUP85-209ENST00000578987 NT5MQ9NPB1 228 aa3.83□□□□□ -1.8
NUP85-209ENST00000578987 ZNF71Q9NQZ8 489 aaPredicted RBP3.83□□□□□ -1.8
NUP85-209ENST00000578987 PHPT1Q9NRX4 125 aaPredicted RBP3.83□□□□□ -1.8
NUP85-209ENST00000578987 PARVAQ9NVD7 372 aa3.83□□□□□ -1.8
NUP85-209ENST00000578987 SLC39A1Q9NY26 324 aa3.83□□□□□ -1.8
NUP85-209ENST00000578987 KCNK4Q9NYG8 393 aa3.83□□□□□ -1.8
NUP85-209ENST00000578987 CNOT8Q9UFF9 292 aaKnown RBP3.83□□□□□ -1.8
NUP85-209ENST00000578987 SEPT3Q9UH03 358 aa3.83□□□□□ -1.8
NUP85-209ENST00000578987 KLHL3Q9UH77 587 aa3.83□□□□□ -1.8
NUP85-209ENST00000578987 ZNHIT2Q9UHR6 403 aa3.83□□□□□ -1.8
NUP85-209ENST00000578987 PHTF1Q9UMS5 762 aa3.83□□□□□ -1.8
NUP85-209ENST00000578987 CHKBQ9Y259 395 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms