RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 DOCK4Q8N1I0 1966 aa6.53□□□□□ -1.36
TRAF4-213ENST00000578917 PLXND1Q9Y4D7 1925 aa6.53□□□□□ -1.36
TRAF4-213ENST00000578917 A0A0U1RQJ8 604 aa6.53□□□□□ -1.36
TRAF4-213ENST00000578917 RGSL1A5PLK6 1076 aa6.53□□□□□ -1.36
TRAF4-213ENST00000578917 PRLP01236 227 aa6.53□□□□□ -1.36
TRAF4-213ENST00000578917 ATP1A1P05023 1023 aaKnown RBP6.53□□□□□ -1.36
TRAF4-213ENST00000578917 ACP1P24666 158 aa6.53□□□□□ -1.36
TRAF4-213ENST00000578917 PTPN7P35236 360 aa6.53□□□□□ -1.36
TRAF4-213ENST00000578917 ACTN2P35609 894 aa6.53□□□□□ -1.36
TRAF4-213ENST00000578917 GNPDA1P46926 289 aa6.53□□□□□ -1.36
TRAF4-213ENST00000578917 POLD2P49005 469 aa6.53□□□□□ -1.36
TRAF4-213ENST00000578917 LMAN1P49257 510 aa6.53□□□□□ -1.36
TRAF4-213ENST00000578917 STC1P52823 247 aa6.53□□□□□ -1.36
TRAF4-213ENST00000578917 GEMP55040 296 aa6.53□□□□□ -1.36
TRAF4-213ENST00000578917 CDK3Q00526 305 aa6.53□□□□□ -1.36
TRAF4-213ENST00000578917 DPTQ07507 201 aa6.53□□□□□ -1.36
TRAF4-213ENST00000578917 MPP3Q13368 585 aa6.53□□□□□ -1.36
TRAF4-213ENST00000578917 PEX6Q13608 980 aa6.53□□□□□ -1.36
TRAF4-213ENST00000578917 IHHQ14623 411 aa6.53□□□□□ -1.36
TRAF4-213ENST00000578917 NOMO1Q15155 1222 aa6.53□□□□□ -1.36
TRAF4-213ENST00000578917 PROX2Q3B8N5 592 aa6.53□□□□□ -1.36
TRAF4-213ENST00000578917 ANKRD20A2Q5SQ80 823 aa6.53□□□□□ -1.36
TRAF4-213ENST00000578917 ANKRD20A1Q5TYW2 823 aa6.53□□□□□ -1.36
TRAF4-213ENST00000578917 ANKRD20A3Q5VUR7 823 aa6.53□□□□□ -1.36
TRAF4-213ENST00000578917 ALS2CLQ60I27 953 aa6.53□□□□□ -1.36
TRAF4-213ENST00000578917 AADACL2Q6P093 401 aa6.53□□□□□ -1.36
TRAF4-213ENST00000578917 LVRNQ6Q4G3 990 aa6.53□□□□□ -1.36
TRAF4-213ENST00000578917 ADAMTSL4Q6UY14 1074 aa6.53□□□□□ -1.36
TRAF4-213ENST00000578917 ARHGEF18Q6ZSZ5 1173 aa6.53□□□□□ -1.36
TRAF4-213ENST00000578917 RFLNAQ6ZTI6 216 aa6.53□□□□□ -1.36
TRAF4-213ENST00000578917 ZNF765Q7L2R6 523 aa6.53□□□□□ -1.36
TRAF4-213ENST00000578917 EFL1Q7Z2Z2 1120 aaKnown RBP6.53□□□□□ -1.36
TRAF4-213ENST00000578917 KANSL1Q7Z3B3 1105 aa6.53□□□□□ -1.36
TRAF4-213ENST00000578917 LYSMD3Q7Z3D4 306 aa6.53□□□□□ -1.36
TRAF4-213ENST00000578917 TECPR1Q7Z6L1 1165 aa6.53□□□□□ -1.36
TRAF4-213ENST00000578917 ZNF567Q8N184 647 aa6.53□□□□□ -1.36
TRAF4-213ENST00000578917 CBARPQ8N350 705 aaPredicted RBP6.53□□□□□ -1.36
TRAF4-213ENST00000578917 FAM71DQ8N9W8 422 aa6.53□□□□□ -1.36
TRAF4-213ENST00000578917 GDAP1Q8TB36 358 aa6.53□□□□□ -1.36
TRAF4-213ENST00000578917 IFI44Q8TCB0 444 aa6.53□□□□□ -1.36
TRAF4-213ENST00000578917 MAPK15Q8TD08 544 aa6.53□□□□□ -1.36
TRAF4-213ENST00000578917 BLOC1S5Q8TDH9 187 aa6.53□□□□□ -1.36
TRAF4-213ENST00000578917 OR1E3Q8WZA6 343 aa6.53□□□□□ -1.36
TRAF4-213ENST00000578917 TTC25Q96NG3 672 aa6.53□□□□□ -1.36
TRAF4-213ENST00000578917 PPP1R2P1Q96PQ5 205 aa6.53□□□□□ -1.36
TRAF4-213ENST00000578917 LRRC61Q9BV99 259 aa6.53□□□□□ -1.36
TRAF4-213ENST00000578917 TEX101Q9BY14 249 aa6.53□□□□□ -1.36
TRAF4-213ENST00000578917 CLPBQ9H078 707 aa6.53□□□□□ -1.36
TRAF4-213ENST00000578917 CDH19Q9H159 772 aa6.53□□□□□ -1.36
TRAF4-213ENST00000578917 USP29Q9HBJ7 922 aa6.53□□□□□ -1.36
TRAF4-213ENST00000578917 FGF22Q9HCT0 170 aa6.53□□□□□ -1.36
TRAF4-213ENST00000578917 MRPL40Q9NQ50 206 aaKnown RBP6.53□□□□□ -1.36
TRAF4-213ENST00000578917 GPR27Q9NS67 375 aa6.53□□□□□ -1.36
TRAF4-213ENST00000578917 ZNF148Q9UQR1 794 aa6.53□□□□□ -1.36
TRAF4-213ENST00000578917 AAR2Q9Y312 384 aaKnown RBP6.53□□□□□ -1.36
TRAF4-213ENST00000578917 PKP3Q9Y446 797 aa6.53□□□□□ -1.36
TRAF4-213ENST00000578917 AK5Q9Y6K8 562 aa6.53□□□□□ -1.36
TRAF4-213ENST00000578917 DGKBQ9Y6T7 804 aa6.53□□□□□ -1.36
TRAF4-213ENST00000578917 FRYQ5TBA9 3013 aa6.53□□□□□ -1.36
TRAF4-213ENST00000578917 PCNX2A6NKB5 2137 aa6.53□□□□□ -1.36
TRAF4-213ENST00000578917 PRSS38A1L453 326 aa6.52□□□□□ -1.37
TRAF4-213ENST00000578917 C2orf81A6NN90 581 aa6.52□□□□□ -1.37
TRAF4-213ENST00000578917 C1QTNF9BB2RNN3 333 aa6.52□□□□□ -1.37
TRAF4-213ENST00000578917 E7EVH7 732 aa6.52□□□□□ -1.37
TRAF4-213ENST00000578917 ZW10O43264 779 aa6.52□□□□□ -1.37
TRAF4-213ENST00000578917 ZSCAN12O43309 604 aa6.52□□□□□ -1.37
TRAF4-213ENST00000578917 OPA1O60313 960 aa6.52□□□□□ -1.37
TRAF4-213ENST00000578917 SLC25A14O95258 325 aaPredicted RBP6.52□□□□□ -1.37
TRAF4-213ENST00000578917 AGTP01019 485 aa6.52□□□□□ -1.37
TRAF4-213ENST00000578917 EPOP01588 193 aa6.52□□□□□ -1.37
TRAF4-213ENST00000578917 CEACAM5P06731 702 aa6.52□□□□□ -1.37
TRAF4-213ENST00000578917 C1QTNF9P0C862 333 aa6.52□□□□□ -1.37
TRAF4-213ENST00000578917 GM2AP17900 193 aa6.52□□□□□ -1.37
TRAF4-213ENST00000578917 CD68P34810 354 aaPredicted RBP6.52□□□□□ -1.37
TRAF4-213ENST00000578917 SPINT3P49223 89 aa6.52□□□□□ -1.37
TRAF4-213ENST00000578917 ACADVLP49748 655 aa6.52□□□□□ -1.37
TRAF4-213ENST00000578917 TARDBPQ13148 414 aaKnown RBP eCLIP6.52□□□□□ -1.37
TRAF4-213ENST00000578917 SNX1Q13596 522 aa6.52□□□□□ -1.37
TRAF4-213ENST00000578917 SMAD1Q15797 465 aaKnown RBP6.52□□□□□ -1.37
TRAF4-213ENST00000578917 SIRPB2Q5JXA9 342 aa6.52□□□□□ -1.37
TRAF4-213ENST00000578917 C6orf132Q5T0Z8 1188 aa6.52□□□□□ -1.37
TRAF4-213ENST00000578917 HES3Q5TGS1 186 aa6.52□□□□□ -1.37
TRAF4-213ENST00000578917 SLC30A9Q6PML9 568 aa6.52□□□□□ -1.37
TRAF4-213ENST00000578917 UNQ6494/PRO21346Q6UXR6 183 aa6.52□□□□□ -1.37
TRAF4-213ENST00000578917 CCNI2Q6ZMN8 369 aaPredicted RBP6.52□□□□□ -1.37
TRAF4-213ENST00000578917 CHST15Q7LFX5 561 aaPredicted RBP6.52□□□□□ -1.37
TRAF4-213ENST00000578917 GSTA5Q7RTV2 222 aa6.52□□□□□ -1.37
TRAF4-213ENST00000578917 TMPRSS7Q7RTY8 843 aa6.52□□□□□ -1.37
TRAF4-213ENST00000578917 TRIM74Q86UV6 250 aa6.52□□□□□ -1.37
TRAF4-213ENST00000578917 NLRP8Q86W28 1048 aa6.52□□□□□ -1.37
TRAF4-213ENST00000578917 MARCH9Q86YJ5 346 aa6.52□□□□□ -1.37
TRAF4-213ENST00000578917 GALNT13Q8IUC8 556 aa6.52□□□□□ -1.37
TRAF4-213ENST00000578917 PELI3Q8N2H9 469 aa6.52□□□□□ -1.37
TRAF4-213ENST00000578917 TAB3Q8N5C8 712 aaPredicted RBP6.52□□□□□ -1.37
TRAF4-213ENST00000578917 PDCD7Q8N8D1 485 aaKnown RBP6.52□□□□□ -1.37
TRAF4-213ENST00000578917 ARL10Q8N8L6 244 aa6.52□□□□□ -1.37
TRAF4-213ENST00000578917 Q8N9G6 341 aaPredicted RBP6.52□□□□□ -1.37
TRAF4-213ENST00000578917 FAM181AQ8N9Y4 354 aa6.52□□□□□ -1.37
TRAF4-213ENST00000578917 TRIM58Q8NG06 486 aa6.52□□□□□ -1.37
TRAF4-213ENST00000578917 CCDC110Q8TBZ0 833 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms