RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 MREGQ8N565 214 aa8.03□□□□□ -1.12
COPS3-215ENST00000578317 ZNF366Q8N895 744 aa8.03□□□□□ -1.12
COPS3-215ENST00000578317 PIP4K2CQ8TBX8 421 aa8.03□□□□□ -1.12
COPS3-215ENST00000578317 RAB7BQ96AH8 199 aa8.03□□□□□ -1.12
COPS3-215ENST00000578317 RMDN1Q96DB5 314 aa8.03□□□□□ -1.12
COPS3-215ENST00000578317 PPP1R16AQ96I34 528 aa8.03□□□□□ -1.12
COPS3-215ENST00000578317 PWWP2AQ96N64 755 aa8.03□□□□□ -1.12
COPS3-215ENST00000578317 APOL2Q9BQE5 337 aa8.03□□□□□ -1.12
COPS3-215ENST00000578317 ZDHHC6Q9H6R6 413 aa8.03□□□□□ -1.12
COPS3-215ENST00000578317 TBC1D17Q9HA65 648 aa8.03□□□□□ -1.12
COPS3-215ENST00000578317 MTF2Q9Y483 593 aaPredicted RBP8.03□□□□□ -1.12
COPS3-215ENST00000578317 NYNRINQ9P2P1 1898 aaKnown RBP8.02□□□□□ -1.12
COPS3-215ENST00000578317 MYO10Q9HD67 2058 aa8.02□□□□□ -1.13
COPS3-215ENST00000578317 COL4A3Q01955 1670 aa8.02□□□□□ -1.13
COPS3-215ENST00000578317 HEATR9A2RTY3 570 aa8.02□□□□□ -1.13
COPS3-215ENST00000578317 C16orf96A6NNT2 1141 aa8.02□□□□□ -1.13
COPS3-215ENST00000578317 DCXO43602 365 aa8.02□□□□□ -1.13
COPS3-215ENST00000578317 LDB2O43679 373 aa8.02□□□□□ -1.13
COPS3-215ENST00000578317 SPAG6O75602 509 aa8.02□□□□□ -1.13
COPS3-215ENST00000578317 USP1O94782 785 aa8.02□□□□□ -1.13
COPS3-215ENST00000578317 CRTAMO95727 393 aa8.02□□□□□ -1.13
COPS3-215ENST00000578317 IL1BP01584 269 aa8.02□□□□□ -1.13
COPS3-215ENST00000578317 PF4P02776 101 aa8.02□□□□□ -1.13
COPS3-215ENST00000578317 TPH1P17752 444 aa8.02□□□□□ -1.13
COPS3-215ENST00000578317 MGAT1P26572 445 aa8.02□□□□□ -1.13
COPS3-215ENST00000578317 SLC8A1P32418 973 aa8.02□□□□□ -1.13
COPS3-215ENST00000578317 HNF1BP35680 557 aa8.02□□□□□ -1.13
COPS3-215ENST00000578317 HMGCLP35914 325 aa8.02□□□□□ -1.13
COPS3-215ENST00000578317 WASP42768 502 aa8.02□□□□□ -1.13
COPS3-215ENST00000578317 EPHB1P54762 984 aa8.02□□□□□ -1.13
COPS3-215ENST00000578317 SESN2P58004 480 aaPredicted RBP8.02□□□□□ -1.13
COPS3-215ENST00000578317 RPS14P62263 151 aaKnown RBP8.02□□□□□ -1.13
COPS3-215ENST00000578317 GALNT3Q14435 633 aa8.02□□□□□ -1.13
COPS3-215ENST00000578317 CST6Q15828 149 aa8.02□□□□□ -1.13
COPS3-215ENST00000578317 BBS9Q3SYG4 887 aa8.02□□□□□ -1.13
COPS3-215ENST00000578317 SNAP47Q5SQN1 464 aa8.02□□□□□ -1.13
COPS3-215ENST00000578317 CFAP58Q5T655 872 aa8.02□□□□□ -1.13
COPS3-215ENST00000578317 ZNF776Q68DI1 518 aaPredicted RBP8.02□□□□□ -1.13
COPS3-215ENST00000578317 KIAA1211LQ6NV74 962 aa8.02□□□□□ -1.13
COPS3-215ENST00000578317 FOXR1Q6PIV2 292 aa8.02□□□□□ -1.13
COPS3-215ENST00000578317 USP45Q70EL2 814 aa8.02□□□□□ -1.13
COPS3-215ENST00000578317 ERN2Q76MJ5 926 aaKnown RBP8.02□□□□□ -1.13
COPS3-215ENST00000578317 TTC7BQ86TV6 843 aa8.02□□□□□ -1.13
COPS3-215ENST00000578317 TMPRSS6Q8IU80 811 aa8.02□□□□□ -1.13
COPS3-215ENST00000578317 MMAAQ8IVH4 418 aaKnown RBP8.02□□□□□ -1.13
COPS3-215ENST00000578317 SPEM1Q8N4L4 309 aa8.02□□□□□ -1.13
COPS3-215ENST00000578317 SLC25A41Q8N5S1 370 aa8.02□□□□□ -1.13
COPS3-215ENST00000578317 LPCAT1Q8NF37 534 aa8.02□□□□□ -1.13
COPS3-215ENST00000578317 PJA1Q8NG27 643 aa8.02□□□□□ -1.13
COPS3-215ENST00000578317 PYROXD1Q8WU10 500 aa8.02□□□□□ -1.13
COPS3-215ENST00000578317 PDCD6IPQ8WUM4 868 aaKnown RBP8.02□□□□□ -1.13
COPS3-215ENST00000578317 TTC25Q96NG3 672 aa8.02□□□□□ -1.13
COPS3-215ENST00000578317 HHIPQ96QV1 700 aa8.02□□□□□ -1.13
COPS3-215ENST00000578317 UHRF1Q96T88 793 aaPredicted RBP8.02□□□□□ -1.13
COPS3-215ENST00000578317 FUT8Q9BYC5 575 aa8.02□□□□□ -1.13
COPS3-215ENST00000578317 MKRN2Q9H000 416 aaKnown RBP8.02□□□□□ -1.13
COPS3-215ENST00000578317 ARFGAP3Q9NP61 516 aa8.02□□□□□ -1.13
COPS3-215ENST00000578317 SAYSD1Q9NPB0 183 aa8.02□□□□□ -1.13
COPS3-215ENST00000578317 ZDHHC4Q9NPG8 344 aa8.02□□□□□ -1.13
COPS3-215ENST00000578317 ARGLU1Q9NWB6 273 aaPredicted RBP8.02□□□□□ -1.13
COPS3-215ENST00000578317 SOX13Q9UN79 622 aa8.02□□□□□ -1.13
COPS3-215ENST00000578317 SIT1Q9Y3P8 196 aa8.02□□□□□ -1.13
COPS3-215ENST00000578317 TTC28Q96AY4 2481 aa8.02□□□□□ -1.13
COPS3-215ENST00000578317 COL4A2P08572 1712 aa8.01□□□□□ -1.13
COPS3-215ENST00000578317 RGSL1A5PLK6 1076 aa8.01□□□□□ -1.13
COPS3-215ENST00000578317 CAPN8A6NHC0 703 aa8.01□□□□□ -1.13
COPS3-215ENST00000578317 C2orf81A6NN90 581 aa8.01□□□□□ -1.13
COPS3-215ENST00000578317 UPK3BL1B0FP48 263 aa8.01□□□□□ -1.13
COPS3-215ENST00000578317 UPK3BL2E5RIL1 263 aa8.01□□□□□ -1.13
COPS3-215ENST00000578317 H0Y858 1186 aa8.01□□□□□ -1.13
COPS3-215ENST00000578317 KPNA3O00505 521 aaPredicted RBP8.01□□□□□ -1.13
COPS3-215ENST00000578317 DYNC1I1O14576 645 aa8.01□□□□□ -1.13
COPS3-215ENST00000578317 AREL1O15033 823 aa8.01□□□□□ -1.13
COPS3-215ENST00000578317 SLC7A4O43246 635 aa8.01□□□□□ -1.13
COPS3-215ENST00000578317 AP1G1O43747 822 aa8.01□□□□□ -1.13
COPS3-215ENST00000578317 ALDH1A2O94788 518 aa8.01□□□□□ -1.13
COPS3-215ENST00000578317 CPP00450 1065 aa8.01□□□□□ -1.13
COPS3-215ENST00000578317 POLBP06746 335 aa8.01□□□□□ -1.13
COPS3-215ENST00000578317 PGAM1P18669 254 aa8.01□□□□□ -1.13
COPS3-215ENST00000578317 ELK3P41970 407 aa8.01□□□□□ -1.13
COPS3-215ENST00000578317 PMS2P54278 862 aa8.01□□□□□ -1.13
COPS3-215ENST00000578317 RPS26P62854 115 aaKnown RBP8.01□□□□□ -1.13
COPS3-215ENST00000578317 CREB5Q02930 508 aa8.01□□□□□ -1.13
COPS3-215ENST00000578317 ACVR1Q04771 509 aa8.01□□□□□ -1.13
COPS3-215ENST00000578317 UBXN2BQ14CS0 331 aa8.01□□□□□ -1.13
COPS3-215ENST00000578317 TAF1AQ15573 450 aaPredicted RBP8.01□□□□□ -1.13
COPS3-215ENST00000578317 SKIDA1Q1XH10 827 aa8.01□□□□□ -1.13
COPS3-215ENST00000578317 STEAP4Q687X5 459 aa8.01□□□□□ -1.13
COPS3-215ENST00000578317 ZNF449Q6P9G9 518 aa8.01□□□□□ -1.13
COPS3-215ENST00000578317 Q6ZS52 159 aa8.01□□□□□ -1.13
COPS3-215ENST00000578317 C3orf62Q6ZUJ4 267 aa8.01□□□□□ -1.13
COPS3-215ENST00000578317 USP30Q70CQ3 517 aa8.01□□□□□ -1.13
COPS3-215ENST00000578317 CCDC25Q86WR0 208 aa8.01□□□□□ -1.13
COPS3-215ENST00000578317 IGDCC3Q8IVU1 814 aa8.01□□□□□ -1.13
COPS3-215ENST00000578317 ZBED8Q8IZ13 594 aa8.01□□□□□ -1.13
COPS3-215ENST00000578317 MPP5Q8N3R9 675 aa8.01□□□□□ -1.13
COPS3-215ENST00000578317 GOLM1Q8NBJ4 401 aa8.01□□□□□ -1.13
COPS3-215ENST00000578317 FBXO36Q8NEA4 188 aa8.01□□□□□ -1.13
COPS3-215ENST00000578317 GRIN3AQ8TCU5 1115 aa8.01□□□□□ -1.13
COPS3-215ENST00000578317 DTX3LQ8TDB6 740 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms