RNA–Protein interactions for RNA: ENST00000577541.1

TOP2A-202, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 420 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-202ENST00000577541 HOXC11O43248 304 aaPredicted RBP2.4□□□□□ -2.03
TOP2A-202ENST00000577541 FGF17O60258 216 aa2.4□□□□□ -2.03
TOP2A-202ENST00000577541 CRYAAP02489 173 aa2.4□□□□□ -2.03
TOP2A-202ENST00000577541 AMBPP02760 352 aa2.4□□□□□ -2.03
TOP2A-202ENST00000577541 PAX1P15863 534 aa2.4□□□□□ -2.03
TOP2A-202ENST00000577541 EIF2S3P41091 472 aaKnown RBP2.4□□□□□ -2.03
TOP2A-202ENST00000577541 UFM1P61960 85 aa2.4□□□□□ -2.03
TOP2A-202ENST00000577541 VEPH1Q14D04 833 aa2.4□□□□□ -2.03
TOP2A-202ENST00000577541 CTF1Q16619 201 aa2.4□□□□□ -2.03
TOP2A-202ENST00000577541 C2orf68Q2NKX9 166 aa2.4□□□□□ -2.03
TOP2A-202ENST00000577541 USP41Q3LFD5 358 aa2.4□□□□□ -2.03
TOP2A-202ENST00000577541 C6orf141Q5SZD1 244 aa2.4□□□□□ -2.03
TOP2A-202ENST00000577541 GGNBP1Q5YKI7 109 aa2.4□□□□□ -2.03
TOP2A-202ENST00000577541 SPINK14Q6IE38 97 aa2.4□□□□□ -2.03
TOP2A-202ENST00000577541 WDR73Q6P4I2 378 aa2.4□□□□□ -2.03
TOP2A-202ENST00000577541 KCTD18Q6PI47 426 aaPredicted RBP2.4□□□□□ -2.03
TOP2A-202ENST00000577541 INO80CQ6PI98 192 aaPredicted RBP2.4□□□□□ -2.03
TOP2A-202ENST00000577541 RRM2BQ7LG56 351 aa2.4□□□□□ -2.03
TOP2A-202ENST00000577541 DSG4Q86SJ6 1040 aa2.4□□□□□ -2.03
TOP2A-202ENST00000577541 GTSCR1Q86UQ5 136 aa2.4□□□□□ -2.03
TOP2A-202ENST00000577541 SPATA6LQ8N4H0 392 aa2.4□□□□□ -2.03
TOP2A-202ENST00000577541 ZCCHC9Q8N567 271 aaKnown RBP2.4□□□□□ -2.03
TOP2A-202ENST00000577541 THAP6Q8TBB0 222 aa2.4□□□□□ -2.03
TOP2A-202ENST00000577541 SLC20A1Q8WUM9 679 aa2.4□□□□□ -2.03
TOP2A-202ENST00000577541 C17orf77Q96MU5 243 aa2.4□□□□□ -2.03
TOP2A-202ENST00000577541 BBS4Q96RK4 519 aa2.4□□□□□ -2.03
TOP2A-202ENST00000577541 KXD1Q9BQD3 176 aa2.4□□□□□ -2.03
TOP2A-202ENST00000577541 LRRC1Q9BTT6 524 aa2.4□□□□□ -2.03
TOP2A-202ENST00000577541 TTYH1Q9H313 450 aaPredicted RBP2.4□□□□□ -2.03
TOP2A-202ENST00000577541 ZNF696Q9H7X3 374 aa2.4□□□□□ -2.03
TOP2A-202ENST00000577541 ABCF3Q9NUQ8 709 aa2.4□□□□□ -2.03
TOP2A-202ENST00000577541 DLGAP4Q9Y2H0 992 aa2.4□□□□□ -2.03
TOP2A-202ENST00000577541 FAM96BQ9Y3D0 163 aa2.4□□□□□ -2.03
TOP2A-202ENST00000577541 LSM4Q9Y4Z0 139 aaKnown RBP2.4□□□□□ -2.03
TOP2A-202ENST00000577541 PDS5AQ29RF7 1337 aaKnown RBP2.4□□□□□ -2.03
TOP2A-202ENST00000577541 C16orf97H3BN30 126 aa2.39□□□□□ -2.03
TOP2A-202ENST00000577541 SEC14L5O43304 696 aa2.39□□□□□ -2.03
TOP2A-202ENST00000577541 TNFSF14O43557 240 aa2.39□□□□□ -2.03
TOP2A-202ENST00000577541 IFIT1P09914 478 aaKnown RBP2.39□□□□□ -2.03
TOP2A-202ENST00000577541 CETPP11597 493 aa2.39□□□□□ -2.03
TOP2A-202ENST00000577541 CDAP32320 146 aa2.39□□□□□ -2.03
TOP2A-202ENST00000577541 TMPOP42166 694 aaKnown RBP2.39□□□□□ -2.03
TOP2A-202ENST00000577541 MMP14P50281 582 aa2.39□□□□□ -2.03
TOP2A-202ENST00000577541 NFIL3Q16649 462 aa2.39□□□□□ -2.03
TOP2A-202ENST00000577541 EIF2S3LQ2VIR3 472 aaKnown RBP2.39□□□□□ -2.03
TOP2A-202ENST00000577541 FBXO46Q6PJ61 603 aaPredicted RBP2.39□□□□□ -2.03
TOP2A-202ENST00000577541 BRAT1Q6PJG6 821 aa2.39□□□□□ -2.03
TOP2A-202ENST00000577541 LCTLQ6UWM7 567 aa2.39□□□□□ -2.03
TOP2A-202ENST00000577541 QSOX2Q6ZRP7 698 aa2.39□□□□□ -2.03
TOP2A-202ENST00000577541 SLC46A3Q7Z3Q1 461 aa2.39□□□□□ -2.03
TOP2A-202ENST00000577541 NRROSQ86YC3 692 aa2.39□□□□□ -2.03
TOP2A-202ENST00000577541 ODF3L1Q8IXM7 274 aa2.39□□□□□ -2.03
TOP2A-202ENST00000577541 RNF113BQ8IZP6 322 aaKnown RBP2.39□□□□□ -2.03
TOP2A-202ENST00000577541 ANKRD42Q8N9B4 389 aa2.39□□□□□ -2.03
TOP2A-202ENST00000577541 KLHDC9Q8NEP7 349 aa2.39□□□□□ -2.03
TOP2A-202ENST00000577541 OR2AK2Q8NG84 335 aa2.39□□□□□ -2.03
TOP2A-202ENST00000577541 LRRC8CQ8TDW0 803 aa2.39□□□□□ -2.03
TOP2A-202ENST00000577541 CDCA5Q96FF9 252 aa2.39□□□□□ -2.03
TOP2A-202ENST00000577541 MAELQ96JY0 434 aaKnown RBP2.39□□□□□ -2.03
TOP2A-202ENST00000577541 PPP1R13BQ96KQ4 1090 aa2.39□□□□□ -2.03
TOP2A-202ENST00000577541 RBM4Q9BWF3 364 aaKnown RBP2.39□□□□□ -2.03
TOP2A-202ENST00000577541 TKTL2Q9H0I9 626 aa2.39□□□□□ -2.03
TOP2A-202ENST00000577541 CSTL1Q9H114 145 aa2.39□□□□□ -2.03
TOP2A-202ENST00000577541 PPP1R3EQ9H7J1 279 aa2.39□□□□□ -2.03
TOP2A-202ENST00000577541 BPIFA1Q9NP55 256 aa2.39□□□□□ -2.03
TOP2A-202ENST00000577541 HINT3Q9NQE9 182 aaKnown RBP2.39□□□□□ -2.03
TOP2A-202ENST00000577541 KCND2Q9NZV8 630 aa2.39□□□□□ -2.03
TOP2A-202ENST00000577541 RCOR1Q9UKL0 485 aa2.39□□□□□ -2.03
TOP2A-202ENST00000577541 ACSL5Q9ULC5 683 aa2.39□□□□□ -2.03
TOP2A-202ENST00000577541 PSAT1Q9Y617 370 aa2.39□□□□□ -2.03
TOP2A-202ENST00000577541 KDM3AQ9Y4C1 1321 aa2.39□□□□□ -2.03
TOP2A-202ENST00000577541 USP17L23D6RBM5 183 aa2.38□□□□□ -2.03
TOP2A-202ENST00000577541 NCAM2O15394 837 aa2.38□□□□□ -2.03
TOP2A-202ENST00000577541 SLC22A3O75751 556 aa2.38□□□□□ -2.03
TOP2A-202ENST00000577541 G6PDP11413 515 aa2.38□□□□□ -2.03
TOP2A-202ENST00000577541 KCNA5P22460 613 aa2.38□□□□□ -2.03
TOP2A-202ENST00000577541 CORO1AP31146 461 aaKnown RBP2.38□□□□□ -2.03
TOP2A-202ENST00000577541 KRT9P35527 623 aa2.38□□□□□ -2.03
TOP2A-202ENST00000577541 HOXA1P49639 335 aaPredicted RBP2.38□□□□□ -2.03
TOP2A-202ENST00000577541 EEF1A1P68104 462 aaKnown RBP2.38□□□□□ -2.03
TOP2A-202ENST00000577541 TRPC3Q13507 836 aa2.38□□□□□ -2.03
TOP2A-202ENST00000577541 ZNF234Q14588 700 aa2.38□□□□□ -2.03
TOP2A-202ENST00000577541 DECR1Q16698 335 aa2.38□□□□□ -2.03
TOP2A-202ENST00000577541 SOWAHCQ53LP3 525 aaPredicted RBP2.38□□□□□ -2.03
TOP2A-202ENST00000577541 EEF1A1P5Q5VTE0 462 aa2.38□□□□□ -2.03
TOP2A-202ENST00000577541 PLA2G4FQ68DD2 849 aa2.38□□□□□ -2.03
TOP2A-202ENST00000577541 SLC36A4Q6YBV0 504 aa2.38□□□□□ -2.03
TOP2A-202ENST00000577541 ZNF497Q6ZNH5 498 aa2.38□□□□□ -2.03
TOP2A-202ENST00000577541 PQLC2Q6ZP29 291 aa2.38□□□□□ -2.03
TOP2A-202ENST00000577541 ASB18Q6ZVZ8 466 aa2.38□□□□□ -2.03
TOP2A-202ENST00000577541 ZNF34Q8IZ26 560 aa2.38□□□□□ -2.03
TOP2A-202ENST00000577541 DSELQ8IZU8 1212 aa2.38□□□□□ -2.03
TOP2A-202ENST00000577541 METTL27Q8N6F8 245 aaPredicted RBP2.38□□□□□ -2.03
TOP2A-202ENST00000577541 TAS1R2Q8TE23 839 aa2.38□□□□□ -2.03
TOP2A-202ENST00000577541 RND1Q92730 232 aa2.38□□□□□ -2.03
TOP2A-202ENST00000577541 TAAR8Q969N4 342 aa2.38□□□□□ -2.03
TOP2A-202ENST00000577541 SCRN2Q96FV2 425 aa2.38□□□□□ -2.03
TOP2A-202ENST00000577541 APOPT1Q96IL0 206 aa2.38□□□□□ -2.03
TOP2A-202ENST00000577541 NR1H4Q96RI1 486 aaPredicted RBP2.38□□□□□ -2.03
TOP2A-202ENST00000577541 SYT17Q9BSW7 474 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms