RNA–Protein interactions for RNA: ENST00000576958.1

PRPF8-215, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 416 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-215ENST00000576958 SLC17A4Q9Y2C5 497 aa11.99□□□□□ -0.49
PRPF8-215ENST00000576958 IGHV1OR21-1A0A087WYE8 117 aa11.98□□□□□ -0.49
PRPF8-215ENST00000576958 TERTO14746 1132 aaKnown RBP11.98□□□□□ -0.49
PRPF8-215ENST00000576958 DUX1O43812 170 aa11.98□□□□□ -0.49
PRPF8-215ENST00000576958 RNF8O76064 485 aa11.98□□□□□ -0.49
PRPF8-215ENST00000576958 CPNE6O95741 557 aa11.98□□□□□ -0.49
PRPF8-215ENST00000576958 PNLIPP16233 465 aa11.98□□□□□ -0.49
PRPF8-215ENST00000576958 GJC1P36383 396 aa11.98□□□□□ -0.49
PRPF8-215ENST00000576958 ACTR1BP42025 376 aa11.98□□□□□ -0.49
PRPF8-215ENST00000576958 ACTR1AP61163 376 aa11.98□□□□□ -0.49
PRPF8-215ENST00000576958 KCNC4Q03721 635 aa11.98□□□□□ -0.49
PRPF8-215ENST00000576958 NIPAL4Q0D2K0 466 aa11.98□□□□□ -0.49
PRPF8-215ENST00000576958 NR1D2Q14995 579 aa11.98□□□□□ -0.49
PRPF8-215ENST00000576958 ANKS6Q68DC2 871 aa11.98□□□□□ -0.49
PRPF8-215ENST00000576958 OR6C4Q8NGE1 309 aa11.98□□□□□ -0.49
PRPF8-215ENST00000576958 SLC37A2Q8TED4 501 aa11.98□□□□□ -0.49
PRPF8-215ENST00000576958 MCCC1Q96RQ3 725 aaPredicted RBP11.98□□□□□ -0.49
PRPF8-215ENST00000576958 CMKLR1Q99788 373 aa11.98□□□□□ -0.49
PRPF8-215ENST00000576958 SEMA3CQ99985 751 aa11.98□□□□□ -0.49
PRPF8-215ENST00000576958 ARHGAP9Q9BRR9 750 aa11.98□□□□□ -0.49
PRPF8-215ENST00000576958 SLC12A9Q9BXP2 914 aa11.98□□□□□ -0.49
PRPF8-215ENST00000576958 GSDMCQ9BYG8 508 aa11.98□□□□□ -0.49
PRPF8-215ENST00000576958 THAP2Q9H0W7 228 aa11.98□□□□□ -0.49
PRPF8-215ENST00000576958 APMAPQ9HDC9 416 aa11.98□□□□□ -0.49
PRPF8-215ENST00000576958 PHPT1Q9NRX4 125 aaPredicted RBP11.98□□□□□ -0.49
PRPF8-215ENST00000576958 DTLQ9NZJ0 730 aa11.98□□□□□ -0.49
PRPF8-215ENST00000576958 EFCAB7A8K855 629 aa11.97□□□□□ -0.49
PRPF8-215ENST00000576958 H3BRJ5 948 aa11.97□□□□□ -0.49
PRPF8-215ENST00000576958 FZD6O60353 706 aa11.97□□□□□ -0.49
PRPF8-215ENST00000576958 CLDN7O95471 211 aa11.97□□□□□ -0.49
PRPF8-215ENST00000576958 PRLP01236 227 aa11.97□□□□□ -0.49
PRPF8-215ENST00000576958 THRAP10827 490 aa11.97□□□□□ -0.49
PRPF8-215ENST00000576958 KELP23276 732 aa11.97□□□□□ -0.49
PRPF8-215ENST00000576958 UGT1A3P35503 534 aa11.97□□□□□ -0.49
PRPF8-215ENST00000576958 MMP13P45452 471 aa11.97□□□□□ -0.49
PRPF8-215ENST00000576958 GPR1P46091 355 aa11.97□□□□□ -0.49
PRPF8-215ENST00000576958 HCAR3P49019 387 aa11.97□□□□□ -0.49
PRPF8-215ENST00000576958 LIMK2P53671 638 aa11.97□□□□□ -0.49
PRPF8-215ENST00000576958 POLR2LP62875 67 aaKnown RBP11.97□□□□□ -0.49
PRPF8-215ENST00000576958 ILF3Q12906 894 aaKnown RBP eCLIP11.97□□□□□ -0.49
PRPF8-215ENST00000576958 RFTN1Q14699 578 aaPredicted RBP11.97□□□□□ -0.49
PRPF8-215ENST00000576958 PYCR3Q53H96 274 aa11.97□□□□□ -0.49
PRPF8-215ENST00000576958 HGSNATQ68CP4 663 aa11.97□□□□□ -0.49
PRPF8-215ENST00000576958 TMCO3Q6UWJ1 677 aa11.97□□□□□ -0.49
PRPF8-215ENST00000576958 B4GALNT4Q76KP1 1039 aa11.97□□□□□ -0.49
PRPF8-215ENST00000576958 ATPAF2Q8N5M1 289 aa11.97□□□□□ -0.49
PRPF8-215ENST00000576958 SCRN2Q96FV2 425 aa11.97□□□□□ -0.49
PRPF8-215ENST00000576958 ZNF599Q96NL3 588 aa11.97□□□□□ -0.49
PRPF8-215ENST00000576958 RIOK2Q9BVS4 552 aaKnown RBP11.97□□□□□ -0.49
PRPF8-215ENST00000576958 FAM117AQ9C073 453 aa11.97□□□□□ -0.49
PRPF8-215ENST00000576958 CNOT6Q9ULM6 557 aaKnown RBP11.97□□□□□ -0.49
PRPF8-215ENST00000576958 PHTF1Q9UMS5 762 aa11.97□□□□□ -0.49
PRPF8-215ENST00000576958 CHKBQ9Y259 395 aa11.97□□□□□ -0.49
PRPF8-215ENST00000576958 UTP20O75691 2785 aaKnown RBP11.97□□□□□ -0.49
PRPF8-215ENST00000576958 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.96□□□□□ -0.49
PRPF8-215ENST00000576958 FADS2P1A8MWK0 482 aa11.96□□□□□ -0.49
PRPF8-215ENST00000576958 TMX2-CTNND1H3BSU7 103 aa11.96□□□□□ -0.49
PRPF8-215ENST00000576958 NKX2-8O15522 239 aa11.96□□□□□ -0.49
PRPF8-215ENST00000576958 ARHGAP6O43182 974 aa11.96□□□□□ -0.49
PRPF8-215ENST00000576958 SUV39H1O43463 412 aa11.96□□□□□ -0.49
PRPF8-215ENST00000576958 SOCS5O75159 536 aa11.96□□□□□ -0.49
PRPF8-215ENST00000576958 HLA-DQB2P05538 268 aa11.96□□□□□ -0.49
PRPF8-215ENST00000576958 IVLP07476 585 aa11.96□□□□□ -0.49
PRPF8-215ENST00000576958 PRKCIP41743 596 aa11.96□□□□□ -0.49
PRPF8-215ENST00000576958 RENBPP51606 427 aa11.96□□□□□ -0.49
PRPF8-215ENST00000576958 ARSEP51690 589 aa11.96□□□□□ -0.49
PRPF8-215ENST00000576958 ITKQ08881 620 aa11.96□□□□□ -0.49
PRPF8-215ENST00000576958 KLHL30Q0D2K2 578 aa11.96□□□□□ -0.49
PRPF8-215ENST00000576958 NFATC2Q13469 925 aa11.96□□□□□ -0.49
PRPF8-215ENST00000576958 SKIDA1Q1XH10 827 aa11.96□□□□□ -0.49
PRPF8-215ENST00000576958 ARMC12Q5T9G4 340 aa11.96□□□□□ -0.49
PRPF8-215ENST00000576958 NCBP2-AS2Q69YL0 99 aa11.96□□□□□ -0.49
PRPF8-215ENST00000576958 TIPARPQ7Z3E1 657 aaKnown RBP11.96□□□□□ -0.49
PRPF8-215ENST00000576958 FAM129CQ86XR2 697 aa11.96□□□□□ -0.49
PRPF8-215ENST00000576958 BMPERQ8N8U9 685 aa11.96□□□□□ -0.49
PRPF8-215ENST00000576958 ANKRD20A12PQ8NF67 263 aa11.96□□□□□ -0.49
PRPF8-215ENST00000576958 KIAA1524Q8TCG1 905 aa11.96□□□□□ -0.49
PRPF8-215ENST00000576958 SPOCK2Q92563 424 aa11.96□□□□□ -0.49
PRPF8-215ENST00000576958 AP2M1Q96CW1 435 aa11.96□□□□□ -0.49
PRPF8-215ENST00000576958 EID2BQ96D98 161 aa11.96□□□□□ -0.49
PRPF8-215ENST00000576958 OR2M4Q96R27 311 aa11.96□□□□□ -0.49
PRPF8-215ENST00000576958 ISCUQ9H1K1 167 aa11.96□□□□□ -0.49
PRPF8-215ENST00000576958 TRNAU1APQ9NX07 287 aaKnown RBP11.96□□□□□ -0.49
PRPF8-215ENST00000576958 KCNK4Q9NYG8 393 aa11.96□□□□□ -0.49
PRPF8-215ENST00000576958 AIPL1Q9NZN9 384 aa11.96□□□□□ -0.49
PRPF8-215ENST00000576958 TBC1D29Q9UFV1 150 aa11.96□□□□□ -0.49
PRPF8-215ENST00000576958 KLHL3Q9UH77 587 aa11.96□□□□□ -0.49
PRPF8-215ENST00000576958 IL17BQ9UHF5 180 aa11.96□□□□□ -0.49
PRPF8-215ENST00000576958 KCNK6Q9Y257 313 aa11.96□□□□□ -0.49
PRPF8-215ENST00000576958 TTLL3Q9Y4R7 772 aa11.96□□□□□ -0.49
PRPF8-215ENST00000576958 MRPS18BQ9Y676 258 aaKnown RBP11.96□□□□□ -0.49
PRPF8-215ENST00000576958 LOC101059948A0A1B0GTJ6 334 aa11.95□□□□□ -0.5
PRPF8-215ENST00000576958 A0A1W2PQC6 194 aa11.95□□□□□ -0.5
PRPF8-215ENST00000576958 DNAJC6O75061 913 aa11.95□□□□□ -0.5
PRPF8-215ENST00000576958 PRKAR1AP10644 381 aa11.95□□□□□ -0.5
PRPF8-215ENST00000576958 CYP2A6P11509 494 aaPredicted RBP11.95□□□□□ -0.5
PRPF8-215ENST00000576958 PCK1P35558 622 aa11.95□□□□□ -0.5
PRPF8-215ENST00000576958 MAPK9P45984 424 aa11.95□□□□□ -0.5
PRPF8-215ENST00000576958 STC1P52823 247 aa11.95□□□□□ -0.5
PRPF8-215ENST00000576958 CDH6P55285 790 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms