RNA–Protein interactions for RNA: ENST00000576218.5

SMG6-220, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 902 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-220ENST00000576218 RBP3P10745 1247 aa15.21■□□□□ 0.03
SMG6-220ENST00000576218 CKMT1AP12532 417 aa15.21■□□□□ 0.03
SMG6-220ENST00000576218 MYF5P13349 255 aa15.21■□□□□ 0.03
SMG6-220ENST00000576218 TRIM23P36406 574 aa15.21■□□□□ 0.03
SMG6-220ENST00000576218 GNPDA1P46926 289 aa15.21■□□□□ 0.03
SMG6-220ENST00000576218 E2F1Q01094 437 aa15.21■□□□□ 0.03
SMG6-220ENST00000576218 IHHQ14623 411 aa15.21■□□□□ 0.03
SMG6-220ENST00000576218 C6orf132Q5T0Z8 1188 aa15.21■□□□□ 0.03
SMG6-220ENST00000576218 ZNF765Q7L2R6 523 aa15.21■□□□□ 0.03
SMG6-220ENST00000576218 LYSMD3Q7Z3D4 306 aa15.21■□□□□ 0.03
SMG6-220ENST00000576218 TECPR1Q7Z6L1 1165 aa15.21■□□□□ 0.03
SMG6-220ENST00000576218 PELI3Q8N2H9 469 aa15.21■□□□□ 0.03
SMG6-220ENST00000576218 SLC25A41Q8N5S1 370 aa15.21■□□□□ 0.03
SMG6-220ENST00000576218 OR1E3Q8WZA6 343 aa15.21■□□□□ 0.03
SMG6-220ENST00000576218 SCAMP4Q969E2 229 aa15.21■□□□□ 0.03
SMG6-220ENST00000576218 LYSMD1Q96S90 227 aa15.21■□□□□ 0.03
SMG6-220ENST00000576218 SRPK1Q96SB4 655 aaKnown RBP15.21■□□□□ 0.03
SMG6-220ENST00000576218 RIOK2Q9BVS4 552 aaKnown RBP15.21■□□□□ 0.03
SMG6-220ENST00000576218 LGR4Q9BXB1 951 aa15.21■□□□□ 0.03
SMG6-220ENST00000576218 ABCG8Q9H221 673 aa15.21■□□□□ 0.03
SMG6-220ENST00000576218 C10orf88Q9H8K7 445 aa15.21■□□□□ 0.03
SMG6-220ENST00000576218 RAD18Q9NS91 495 aa15.21■□□□□ 0.03
SMG6-220ENST00000576218 PNMA8BQ9ULN7 279 aaPredicted RBP15.21■□□□□ 0.03
SMG6-220ENST00000576218 GPR34Q9UPC5 381 aa15.21■□□□□ 0.03
SMG6-220ENST00000576218 ZNF711Q9Y462 761 aa15.21■□□□□ 0.03
SMG6-220ENST00000576218 FAM149AA5PLN7 773 aa15.2■□□□□ 0.02
SMG6-220ENST00000576218 C1QTNF9BB2RNN3 333 aa15.2■□□□□ 0.02
SMG6-220ENST00000576218 YY2O15391 372 aa15.2■□□□□ 0.02
SMG6-220ENST00000576218 ANXA9O76027 345 aa15.2■□□□□ 0.02
SMG6-220ENST00000576218 CELA2BP08218 269 aaPredicted RBP15.2■□□□□ 0.02
SMG6-220ENST00000576218 C1QTNF9P0C862 333 aa15.2■□□□□ 0.02
SMG6-220ENST00000576218 TEAD1P28347 426 aa15.2■□□□□ 0.02
SMG6-220ENST00000576218 GEMP55040 296 aa15.2■□□□□ 0.02
SMG6-220ENST00000576218 WNT3AP56704 352 aa15.2■□□□□ 0.02
SMG6-220ENST00000576218 DPTQ07507 201 aa15.2■□□□□ 0.02
SMG6-220ENST00000576218 ILF3Q12906 894 aaKnown RBP eCLIP15.2■□□□□ 0.02
SMG6-220ENST00000576218 MPP3Q13368 585 aa15.2■□□□□ 0.02
SMG6-220ENST00000576218 BIRC2Q13490 618 aa15.2■□□□□ 0.02
SMG6-220ENST00000576218 HES3Q5TGS1 186 aa15.2■□□□□ 0.02
SMG6-220ENST00000576218 ALS2CLQ60I27 953 aa15.2■□□□□ 0.02
SMG6-220ENST00000576218 RFLNAQ6ZTI6 216 aa15.2■□□□□ 0.02
SMG6-220ENST00000576218 TMPRSS7Q7RTY8 843 aa15.2■□□□□ 0.02
SMG6-220ENST00000576218 EFL1Q7Z2Z2 1120 aaKnown RBP15.2■□□□□ 0.02
SMG6-220ENST00000576218 TMPRSS12Q86WS5 348 aa15.2■□□□□ 0.02
SMG6-220ENST00000576218 SDR16C5Q8N3Y7 309 aa15.2■□□□□ 0.02
SMG6-220ENST00000576218 FAM181AQ8N9Y4 354 aa15.2■□□□□ 0.02
SMG6-220ENST00000576218 IFI44Q8TCB0 444 aa15.2■□□□□ 0.02
SMG6-220ENST00000576218 MAPK15Q8TD08 544 aa15.2■□□□□ 0.02
SMG6-220ENST00000576218 FCRL5Q96RD9 977 aa15.2■□□□□ 0.02
SMG6-220ENST00000576218 SPATA16Q9BXB7 569 aa15.2■□□□□ 0.02
SMG6-220ENST00000576218 TEX101Q9BY14 249 aa15.2■□□□□ 0.02
SMG6-220ENST00000576218 FAM83DQ9H4H8 585 aa15.2■□□□□ 0.02
SMG6-220ENST00000576218 WASF3Q9UPY6 502 aa15.2■□□□□ 0.02
SMG6-220ENST00000576218 DGKBQ9Y6T7 804 aa15.2■□□□□ 0.02
SMG6-220ENST00000576218 CHD8Q9HCK8 2581 aa15.19■□□□□ 0.02
SMG6-220ENST00000576218 B4DGG1 531 aa15.19■□□□□ 0.02
SMG6-220ENST00000576218 DDX3YO15523 660 aaKnown RBP15.19■□□□□ 0.02
SMG6-220ENST00000576218 DKK1O94907 266 aa15.19■□□□□ 0.02
SMG6-220ENST00000576218 GIMD1P0DJR0 217 aa15.19■□□□□ 0.02
SMG6-220ENST00000576218 CD68P34810 354 aaPredicted RBP15.19■□□□□ 0.02
SMG6-220ENST00000576218 SPINT3P49223 89 aa15.19■□□□□ 0.02
SMG6-220ENST00000576218 SMAD1Q15797 465 aaKnown RBP15.19■□□□□ 0.02
SMG6-220ENST00000576218 LVRNQ6Q4G3 990 aa15.19■□□□□ 0.02
SMG6-220ENST00000576218 ADAMTSL4Q6UY14 1074 aa15.19■□□□□ 0.02
SMG6-220ENST00000576218 ARHGEF18Q6ZSZ5 1173 aa15.19■□□□□ 0.02
SMG6-220ENST00000576218 MARK2Q7KZI7 788 aaKnown RBP15.19■□□□□ 0.02
SMG6-220ENST00000576218 TRIM74Q86UV6 250 aa15.19■□□□□ 0.02
SMG6-220ENST00000576218 RAVER1Q8IY67 606 aaKnown RBP15.19■□□□□ 0.02
SMG6-220ENST00000576218 ARL10Q8N8L6 244 aa15.19■□□□□ 0.02
SMG6-220ENST00000576218 FAM46DQ8NEK8 389 aa15.19■□□□□ 0.02
SMG6-220ENST00000576218 NAT6Q93015 286 aa15.19■□□□□ 0.02
SMG6-220ENST00000576218 HES6Q96HZ4 224 aa15.19■□□□□ 0.02
SMG6-220ENST00000576218 HIC2Q96JB3 615 aa15.19■□□□□ 0.02
SMG6-220ENST00000576218 PPP1R2P1Q96PQ5 205 aa15.19■□□□□ 0.02
SMG6-220ENST00000576218 TRIB3Q96RU7 358 aa15.19■□□□□ 0.02
SMG6-220ENST00000576218 HERPUD2Q9BSE4 406 aa15.19■□□□□ 0.02
SMG6-220ENST00000576218 GSDMCQ9BYG8 508 aa15.19■□□□□ 0.02
SMG6-220ENST00000576218 CLPBQ9H078 707 aa15.19■□□□□ 0.02
SMG6-220ENST00000576218 CDH19Q9H159 772 aa15.19■□□□□ 0.02
SMG6-220ENST00000576218 GBA3Q9H227 469 aa15.19■□□□□ 0.02
SMG6-220ENST00000576218 DPEP2Q9H4A9 486 aa15.19■□□□□ 0.02
SMG6-220ENST00000576218 MAGEE1Q9HCI5 957 aa15.19■□□□□ 0.02
SMG6-220ENST00000576218 SUFUQ9UMX1 484 aa15.19■□□□□ 0.02
SMG6-220ENST00000576218 GPSM3Q9Y4H4 160 aa15.19■□□□□ 0.02
SMG6-220ENST00000576218 TPRP12270 2363 aaKnown RBP15.19■□□□□ 0.02
SMG6-220ENST00000576218 ACACBO00763 2458 aa15.19■□□□□ 0.02
SMG6-220ENST00000576218 RGSL1A5PLK6 1076 aa15.18■□□□□ 0.02
SMG6-220ENST00000576218 GP1BAP07359 652 aa15.18■□□□□ 0.02
SMG6-220ENST00000576218 HLA-DPA1P20036 260 aa15.18■□□□□ 0.02
SMG6-220ENST00000576218 CLDN6P56747 220 aa15.18■□□□□ 0.02
SMG6-220ENST00000576218 PEX6Q13608 980 aa15.18■□□□□ 0.02
SMG6-220ENST00000576218 RPS6KA1Q15418 735 aa15.18■□□□□ 0.02
SMG6-220ENST00000576218 ST3GAL2Q16842 350 aa15.18■□□□□ 0.02
SMG6-220ENST00000576218 ZNF569Q5MCW4 686 aa15.18■□□□□ 0.02
SMG6-220ENST00000576218 GUSBP11Q6P575 273 aa15.18■□□□□ 0.02
SMG6-220ENST00000576218 CCNI2Q6ZMN8 369 aaPredicted RBP15.18■□□□□ 0.02
SMG6-220ENST00000576218 NYAP1Q6ZVC0 841 aa15.18■□□□□ 0.02
SMG6-220ENST00000576218 GLT6D1Q7Z4J2 308 aa15.18■□□□□ 0.02
SMG6-220ENST00000576218 GALNT13Q8IUC8 556 aa15.18■□□□□ 0.02
SMG6-220ENST00000576218 SLC35F3Q8IY50 421 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms