RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 ARL5AQ9Y689 179 aa7.9□□□□□ -1.14
CCDC40-215ENST00000576033 OAS3Q9Y6K5 1087 aaKnown RBP7.9□□□□□ -1.14
CCDC40-215ENST00000576033 AKAP13Q12802 2813 aa7.9□□□□□ -1.15
CCDC40-215ENST00000576033 SPTBN2O15020 2390 aa7.89□□□□□ -1.15
CCDC40-215ENST00000576033 LOC285095A0A1B0GVY8 99 aa7.89□□□□□ -1.15
CCDC40-215ENST00000576033 ESYT3A0FGR9 886 aa7.89□□□□□ -1.15
CCDC40-215ENST00000576033 TMEM202A6NGA9 273 aa7.89□□□□□ -1.15
CCDC40-215ENST00000576033 PRAMEF26H0Y7S4 382 aa7.89□□□□□ -1.15
CCDC40-215ENST00000576033 TLR4O00206 839 aa7.89□□□□□ -1.15
CCDC40-215ENST00000576033 GAPDHSO14556 408 aaPredicted RBP7.89□□□□□ -1.15
CCDC40-215ENST00000576033 GIPC1O14908 333 aa7.89□□□□□ -1.15
CCDC40-215ENST00000576033 INPP4BO15327 924 aa7.89□□□□□ -1.15
CCDC40-215ENST00000576033 OPHN1O60890 802 aa7.89□□□□□ -1.15
CCDC40-215ENST00000576033 GCATO75600 419 aa7.89□□□□□ -1.15
CCDC40-215ENST00000576033 TMEM63AO94886 807 aa7.89□□□□□ -1.15
CCDC40-215ENST00000576033 NDST3O95803 873 aa7.89□□□□□ -1.15
CCDC40-215ENST00000576033 ITGAVP06756 1048 aa7.89□□□□□ -1.15
CCDC40-215ENST00000576033 F7P08709 466 aaPredicted RBP7.89□□□□□ -1.15
CCDC40-215ENST00000576033 POLD2P49005 469 aa7.89□□□□□ -1.15
CCDC40-215ENST00000576033 PFN3P60673 137 aa7.89□□□□□ -1.15
CCDC40-215ENST00000576033 CRADDP78560 199 aa7.89□□□□□ -1.15
CCDC40-215ENST00000576033 TMPRSS15P98073 1019 aa7.89□□□□□ -1.15
CCDC40-215ENST00000576033 DR1Q01658 176 aa7.89□□□□□ -1.15
CCDC40-215ENST00000576033 GUCY2DQ02846 1103 aa7.89□□□□□ -1.15
CCDC40-215ENST00000576033 SFSWAPQ12872 951 aaKnown RBP7.89□□□□□ -1.15
CCDC40-215ENST00000576033 BNIP3Q12983 259 aa7.89□□□□□ -1.15
CCDC40-215ENST00000576033 EIF2B5Q13144 721 aaKnown RBP7.89□□□□□ -1.15
CCDC40-215ENST00000576033 SGCGQ13326 291 aa7.89□□□□□ -1.15
CCDC40-215ENST00000576033 MPP3Q13368 585 aa7.89□□□□□ -1.15
CCDC40-215ENST00000576033 MSLNQ13421 630 aaPredicted RBP7.89□□□□□ -1.15
CCDC40-215ENST00000576033 FZD2Q14332 565 aa7.89□□□□□ -1.15
CCDC40-215ENST00000576033 INPP5AQ14642 412 aa7.89□□□□□ -1.15
CCDC40-215ENST00000576033 LRRC14Q15048 493 aa7.89□□□□□ -1.15
CCDC40-215ENST00000576033 TRADDQ15628 312 aa7.89□□□□□ -1.15
CCDC40-215ENST00000576033 CCNG2Q16589 344 aa7.89□□□□□ -1.15
CCDC40-215ENST00000576033 RSPO4Q2I0M5 234 aaPredicted RBP7.89□□□□□ -1.15
CCDC40-215ENST00000576033 KHDC1Q4VXA5 237 aaKnown RBP7.89□□□□□ -1.15
CCDC40-215ENST00000576033 CCDC38Q502W7 563 aa7.89□□□□□ -1.15
CCDC40-215ENST00000576033 RALGPS1Q5JS13 557 aa7.89□□□□□ -1.15
CCDC40-215ENST00000576033 STPG1Q5TH74 334 aa7.89□□□□□ -1.15
CCDC40-215ENST00000576033 NEK5Q6P3R8 708 aa7.89□□□□□ -1.15
CCDC40-215ENST00000576033 DOK6Q6PKX4 331 aa7.89□□□□□ -1.15
CCDC40-215ENST00000576033 KYAT3Q6YP21 454 aaKnown RBP7.89□□□□□ -1.15
CCDC40-215ENST00000576033 SYDE1Q6ZW31 735 aaPredicted RBP7.89□□□□□ -1.15
CCDC40-215ENST00000576033 ZNF534Q76KX8 674 aa7.89□□□□□ -1.15
CCDC40-215ENST00000576033 TECPR1Q7Z6L1 1165 aa7.89□□□□□ -1.15
CCDC40-215ENST00000576033 HEATR4Q86WZ0 1026 aa7.89□□□□□ -1.15
CCDC40-215ENST00000576033 SPNS2Q8IVW8 549 aa7.89□□□□□ -1.15
CCDC40-215ENST00000576033 GSPT2Q8IYD1 628 aaKnown RBP7.89□□□□□ -1.15
CCDC40-215ENST00000576033 CBARPQ8N350 705 aaPredicted RBP7.89□□□□□ -1.15
CCDC40-215ENST00000576033 GPR26Q8NDV2 337 aa7.89□□□□□ -1.15
CCDC40-215ENST00000576033 OR52K1Q8NGK4 314 aa7.89□□□□□ -1.15
CCDC40-215ENST00000576033 HCAR2Q8TDS4 363 aa7.89□□□□□ -1.15
CCDC40-215ENST00000576033 SPOCK2Q92563 424 aa7.89□□□□□ -1.15
CCDC40-215ENST00000576033 TSACCQ96A04 125 aaPredicted RBP7.89□□□□□ -1.15
CCDC40-215ENST00000576033 MAGOHBQ96A72 148 aaKnown RBP7.89□□□□□ -1.15
CCDC40-215ENST00000576033 TBL1YQ9BQ87 522 aa7.89□□□□□ -1.15
CCDC40-215ENST00000576033 ERP44Q9BS26 406 aa7.89□□□□□ -1.15
CCDC40-215ENST00000576033 TRIM51Q9BSJ1 452 aa7.89□□□□□ -1.15
CCDC40-215ENST00000576033 RIOK2Q9BVS4 552 aaKnown RBP7.89□□□□□ -1.15
CCDC40-215ENST00000576033 FSD1LQ9BXM9 530 aa7.89□□□□□ -1.15
CCDC40-215ENST00000576033 NUSAP1Q9BXS6 441 aaKnown RBP7.89□□□□□ -1.15
CCDC40-215ENST00000576033 TXLNGYQ9BZA5 131 aa7.89□□□□□ -1.15
CCDC40-215ENST00000576033 FAM129AQ9BZQ8 928 aa7.89□□□□□ -1.15
CCDC40-215ENST00000576033 FGF22Q9HCT0 170 aa7.89□□□□□ -1.15
CCDC40-215ENST00000576033 RAB6BQ9NRW1 208 aa7.89□□□□□ -1.15
CCDC40-215ENST00000576033 FAM114A2Q9NRY5 505 aa7.89□□□□□ -1.15
CCDC40-215ENST00000576033 HOMER3Q9NSC5 361 aa7.89□□□□□ -1.15
CCDC40-215ENST00000576033 TRHDEQ9UKU6 1024 aa7.89□□□□□ -1.15
CCDC40-215ENST00000576033 TMPRSS11EQ9UL52 423 aa7.89□□□□□ -1.15
CCDC40-215ENST00000576033 DCDC2BA2VCK2 349 aa7.88□□□□□ -1.15
CCDC40-215ENST00000576033 A6NNZ2 444 aa7.88□□□□□ -1.15
CCDC40-215ENST00000576033 FPGTO14772 594 aa7.88□□□□□ -1.15
CCDC40-215ENST00000576033 VILLO15195 856 aa7.88□□□□□ -1.15
CCDC40-215ENST00000576033 TP73O15350 636 aa7.88□□□□□ -1.15
CCDC40-215ENST00000576033 MTSS1O43312 755 aa7.88□□□□□ -1.15
CCDC40-215ENST00000576033 MTX2O75431 263 aa7.88□□□□□ -1.15
CCDC40-215ENST00000576033 BANF1O75531 89 aa7.88□□□□□ -1.15
CCDC40-215ENST00000576033 AP2A1O95782 977 aa7.88□□□□□ -1.15
CCDC40-215ENST00000576033 FUCA1P04066 466 aa7.88□□□□□ -1.15
CCDC40-215ENST00000576033 CYP2A6P11509 494 aaPredicted RBP7.88□□□□□ -1.15
CCDC40-215ENST00000576033 CD59P13987 128 aa7.88□□□□□ -1.15
CCDC40-215ENST00000576033 GNSP15586 552 aa7.88□□□□□ -1.15
CCDC40-215ENST00000576033 BPIP17213 487 aa7.88□□□□□ -1.15
CCDC40-215ENST00000576033 IVDP26440 423 aa7.88□□□□□ -1.15
CCDC40-215ENST00000576033 HOXD12P35452 270 aa7.88□□□□□ -1.15
CCDC40-215ENST00000576033 GEMP55040 296 aa7.88□□□□□ -1.15
CCDC40-215ENST00000576033 CLDN6P56747 220 aa7.88□□□□□ -1.15
CCDC40-215ENST00000576033 C21orf59P57076 290 aa7.88□□□□□ -1.15
CCDC40-215ENST00000576033 POLR2LP62875 67 aaKnown RBP7.88□□□□□ -1.15
CCDC40-215ENST00000576033 BASP1P80723 227 aaKnown RBP7.88□□□□□ -1.15
CCDC40-215ENST00000576033 C1orf61Q13536 156 aa7.88□□□□□ -1.15
CCDC40-215ENST00000576033 SEPT6Q14141 434 aa7.88□□□□□ -1.15
CCDC40-215ENST00000576033 ARHGEF7Q14155 803 aa7.88□□□□□ -1.15
CCDC40-215ENST00000576033 STAT4Q14765 748 aa7.88□□□□□ -1.15
CCDC40-215ENST00000576033 POU6F1Q14863 301 aa7.88□□□□□ -1.15
CCDC40-215ENST00000576033 ALG11Q2TAA5 492 aa7.88□□□□□ -1.15
CCDC40-215ENST00000576033 P3H1Q32P28 736 aa7.88□□□□□ -1.15
CCDC40-215ENST00000576033 CERCAMQ5T4B2 595 aa7.88□□□□□ -1.15
CCDC40-215ENST00000576033 ITPRIPL1Q6GPH6 555 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms