RNA–Protein interactions for RNA: ENST00000571976.1

LITAF-210, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 2 BASIC

Gene LITAF, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-210ENST00000571976 PHACTR4Q8IZ21 702 aa16.12■□□□□ 0.17
LITAF-210ENST00000571976 SLC25A45Q8N413 288 aa16.12■□□□□ 0.17
LITAF-210ENST00000571976 PRELID2Q8N945 189 aa16.12■□□□□ 0.17
LITAF-210ENST00000571976 CCDC89Q8N998 374 aa16.12■□□□□ 0.17
LITAF-210ENST00000571976 ACTRT1Q8TDG2 376 aa16.12■□□□□ 0.17
LITAF-210ENST00000571976 TBATAQ96M53 351 aa16.12■□□□□ 0.17
LITAF-210ENST00000571976 CDC6Q99741 560 aa16.12■□□□□ 0.17
LITAF-210ENST00000571976 RIOK2Q9BVS4 552 aaKnown RBP16.12■□□□□ 0.17
LITAF-210ENST00000571976 LGR4Q9BXB1 951 aa16.12■□□□□ 0.17
LITAF-210ENST00000571976 SLC13A1Q9BZW2 595 aa16.12■□□□□ 0.17
LITAF-210ENST00000571976 PAK5Q9P286 719 aa16.12■□□□□ 0.17
LITAF-210ENST00000571976 FEZ2Q9UHY8 353 aaPredicted RBP16.12■□□□□ 0.17
LITAF-210ENST00000571976 KLF15Q9UIH9 416 aa16.12■□□□□ 0.17
LITAF-210ENST00000571976 BTBD3Q9Y2F9 522 aa16.12■□□□□ 0.17
LITAF-210ENST00000571976 NEMP2A6NFY4 417 aa16.11■□□□□ 0.17
LITAF-210ENST00000571976 TMEM202A6NGA9 273 aa16.11■□□□□ 0.17
LITAF-210ENST00000571976 PGRMC1O00264 195 aaKnown RBP16.11■□□□□ 0.17
LITAF-210ENST00000571976 TNFRSF10CO14798 259 aa16.11■□□□□ 0.17
LITAF-210ENST00000571976 AURKAO14965 403 aa16.11■□□□□ 0.17
LITAF-210ENST00000571976 RASGRP1O95267 797 aa16.11■□□□□ 0.17
LITAF-210ENST00000571976 SOD1P00441 154 aa16.11■□□□□ 0.17
LITAF-210ENST00000571976 HMGCLP35914 325 aa16.11■□□□□ 0.17
LITAF-210ENST00000571976 FDFT1P37268 417 aa16.11■□□□□ 0.17
LITAF-210ENST00000571976 SRP54P61011 504 aaKnown RBP16.11■□□□□ 0.17
LITAF-210ENST00000571976 CDK3Q00526 305 aa16.11■□□□□ 0.17
LITAF-210ENST00000571976 ALG11Q2TAA5 492 aa16.11■□□□□ 0.17
LITAF-210ENST00000571976 HENMT1Q5T8I9 393 aaKnown RBP16.11■□□□□ 0.17
LITAF-210ENST00000571976 C4orf22Q6V702 233 aa16.11■□□□□ 0.17
LITAF-210ENST00000571976 GSTA5Q7RTV2 222 aa16.11■□□□□ 0.17
LITAF-210ENST00000571976 GLT6D1Q7Z4J2 308 aa16.11■□□□□ 0.17
LITAF-210ENST00000571976 OR56A4Q8NGH8 313 aa16.11■□□□□ 0.17
LITAF-210ENST00000571976 BLOC1S5Q8TDH9 187 aa16.11■□□□□ 0.17
LITAF-210ENST00000571976 COG1Q8WTW3 980 aa16.11■□□□□ 0.17
LITAF-210ENST00000571976 WDR24Q96S15 920 aa16.11■□□□□ 0.17
LITAF-210ENST00000571976 TBL1YQ9BQ87 522 aa16.11■□□□□ 0.17
LITAF-210ENST00000571976 APOL2Q9BQE5 337 aa16.11■□□□□ 0.17
LITAF-210ENST00000571976 LRRC40Q9H9A6 602 aa16.11■□□□□ 0.17
LITAF-210ENST00000571976 ARNT2Q9HBZ2 717 aa16.11■□□□□ 0.17
LITAF-210ENST00000571976 NFKBIL1Q9UBC1 381 aaPredicted RBP16.11■□□□□ 0.17
LITAF-210ENST00000571976 SPASTQ9UBP0 616 aa16.11■□□□□ 0.17
LITAF-210ENST00000571976 KLQ9UEF7 1012 aa16.11■□□□□ 0.17
LITAF-210ENST00000571976 APOBEC3BQ9UH17 382 aaKnown RBP16.11■□□□□ 0.17
LITAF-210ENST00000571976 ERI2A8K979 691 aaKnown RBP16.1■□□□□ 0.17
LITAF-210ENST00000571976 GIPC1O14908 333 aa16.1■□□□□ 0.17
LITAF-210ENST00000571976 USP12O75317 370 aa16.1■□□□□ 0.17
LITAF-210ENST00000571976 AP2A1O95782 977 aa16.1■□□□□ 0.17
LITAF-210ENST00000571976 TNFP01375 233 aa16.1■□□□□ 0.17
LITAF-210ENST00000571976 SLC4A1P02730 911 aa16.1■□□□□ 0.17
LITAF-210ENST00000571976 KCNA4P22459 653 aa16.1■□□□□ 0.17
LITAF-210ENST00000571976 KCNJ1P48048 391 aa16.1■□□□□ 0.17
LITAF-210ENST00000571976 HK3P52790 923 aa16.1■□□□□ 0.17
LITAF-210ENST00000571976 DCDC1P59894 354 aa16.1■□□□□ 0.17
LITAF-210ENST00000571976 SPARCL1Q14515 664 aa16.1■□□□□ 0.17
LITAF-210ENST00000571976 TRIP6Q15654 476 aaKnown RBP16.1■□□□□ 0.17
LITAF-210ENST00000571976 ZDHHC20Q5W0Z9 365 aa16.1■□□□□ 0.17
LITAF-210ENST00000571976 ERMP1Q7Z2K6 904 aa16.1■□□□□ 0.17
LITAF-210ENST00000571976 HID1Q8IV36 788 aa16.1■□□□□ 0.17
LITAF-210ENST00000571976 TTC30BQ8N4P2 665 aa16.1■□□□□ 0.17
LITAF-210ENST00000571976 TAB3Q8N5C8 712 aaPredicted RBP16.1■□□□□ 0.17
LITAF-210ENST00000571976 EID2Q8N6I1 236 aa16.1■□□□□ 0.17
LITAF-210ENST00000571976 PDCD7Q8N8D1 485 aaKnown RBP16.1■□□□□ 0.17
LITAF-210ENST00000571976 ZNF548Q8NEK5 533 aaPredicted RBP16.1■□□□□ 0.17
LITAF-210ENST00000571976 BAHD1Q8TBE0 780 aaPredicted RBP16.1■□□□□ 0.17
LITAF-210ENST00000571976 LMX1AQ8TE12 382 aa16.1■□□□□ 0.17
LITAF-210ENST00000571976 TSACCQ96A04 125 aaPredicted RBP16.1■□□□□ 0.17
LITAF-210ENST00000571976 AGAP2Q99490 1192 aa16.1■□□□□ 0.17
LITAF-210ENST00000571976 NAPGQ99747 312 aaPredicted RBP16.1■□□□□ 0.17
LITAF-210ENST00000571976 AP1M1Q9BXS5 423 aa16.1■□□□□ 0.17
LITAF-210ENST00000571976 ETNK1Q9HBU6 452 aa16.1■□□□□ 0.17
LITAF-210ENST00000571976 UCKL1Q9NWZ5 548 aa16.1■□□□□ 0.17
LITAF-210ENST00000571976 PNMA8BQ9ULN7 279 aaPredicted RBP16.1■□□□□ 0.17
LITAF-210ENST00000571976 CSNK1G3Q9Y6M4 447 aa16.1■□□□□ 0.17
LITAF-210ENST00000571976 DGKBQ9Y6T7 804 aa16.1■□□□□ 0.17
LITAF-210ENST00000571976 SCAMP1O15126 338 aa16.09■□□□□ 0.17
LITAF-210ENST00000571976 AQP9O43315 295 aa16.09■□□□□ 0.17
LITAF-210ENST00000571976 PPFIA2O75334 1257 aa16.09■□□□□ 0.17
LITAF-210ENST00000571976 ALPPL2P10696 532 aa16.09■□□□□ 0.17
LITAF-210ENST00000571976 ETS1P14921 441 aa16.09■□□□□ 0.17
LITAF-210ENST00000571976 BPIP17213 487 aa16.09■□□□□ 0.17
LITAF-210ENST00000571976 RPL22P35268 128 aaKnown RBP16.09■□□□□ 0.17
LITAF-210ENST00000571976 OLIG2Q13516 323 aa16.09■□□□□ 0.17
LITAF-210ENST00000571976 HS1BP3Q53T59 392 aa16.09■□□□□ 0.17
LITAF-210ENST00000571976 PRRT3Q5FWE3 981 aa16.09■□□□□ 0.17
LITAF-210ENST00000571976 PAPD7Q5XG87 772 aaKnown RBP16.09■□□□□ 0.17
LITAF-210ENST00000571976 DENND5AQ6IQ26 1287 aa16.09■□□□□ 0.17
LITAF-210ENST00000571976 RD3Q7Z3Z2 195 aa16.09■□□□□ 0.17
LITAF-210ENST00000571976 GLRX5Q86SX6 157 aa16.09■□□□□ 0.17
LITAF-210ENST00000571976 LINC00523Q86TU6 105 aa16.09■□□□□ 0.17
LITAF-210ENST00000571976 RBFAQ8N0V3 343 aa16.09■□□□□ 0.17
LITAF-210ENST00000571976 GPR26Q8NDV2 337 aa16.09■□□□□ 0.17
LITAF-210ENST00000571976 BRSK1Q8TDC3 778 aa16.09■□□□□ 0.17
LITAF-210ENST00000571976 OR1E3Q8WZA6 343 aa16.09■□□□□ 0.17
LITAF-210ENST00000571976 MAGOHBQ96A72 148 aaKnown RBP16.09■□□□□ 0.17
LITAF-210ENST00000571976 HIC2Q96JB3 615 aa16.09■□□□□ 0.17
LITAF-210ENST00000571976 PLEKHG4BQ96PX9 1271 aa16.09■□□□□ 0.17
LITAF-210ENST00000571976 ZSCAN5AQ9BUG6 496 aa16.09■□□□□ 0.17
LITAF-210ENST00000571976 TCEAL2Q9H3H9 227 aaPredicted RBP16.09■□□□□ 0.17
LITAF-210ENST00000571976 FGF22Q9HCT0 170 aa16.09■□□□□ 0.17
LITAF-210ENST00000571976 RAB6BQ9NRW1 208 aa16.09■□□□□ 0.17
LITAF-210ENST00000571976 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.09■□□□□ 0.172e-6■□□□□ 8.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms