RNA–Protein interactions for RNA: ENST00000571688.5

LITAF-209, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-209ENST00000571688 RABL3Q5HYI8 236 aa16.79■□□□□ 0.28
LITAF-209ENST00000571688 C6orf141Q5SZD1 244 aa16.79■□□□□ 0.28
LITAF-209ENST00000571688 RNF135Q8IUD6 432 aa16.79■□□□□ 0.28
LITAF-209ENST00000571688 MMAAQ8IVH4 418 aaKnown RBP16.79■□□□□ 0.28
LITAF-209ENST00000571688 RIMKLAQ8IXN7 391 aa16.79■□□□□ 0.28
LITAF-209ENST00000571688 KLHDC8BQ8IXV7 354 aa16.79■□□□□ 0.28
LITAF-209ENST00000571688 CHDHQ8NE62 594 aaPredicted RBP16.79■□□□□ 0.28
LITAF-209ENST00000571688 BIRC7Q96CA5 298 aa16.79■□□□□ 0.28
LITAF-209ENST00000571688 SEPHS2Q99611 448 aa16.79■□□□□ 0.28
LITAF-209ENST00000571688 BCL7BQ9BQE9 202 aa16.79■□□□□ 0.28
LITAF-209ENST00000571688 HOXD1Q9GZZ0 328 aa16.79■□□□□ 0.28
LITAF-209ENST00000571688 PCDH12Q9NPG4 1184 aa16.79■□□□□ 0.28
LITAF-209ENST00000571688 GIMAP2Q9UG22 337 aa16.79■□□□□ 0.28
LITAF-209ENST00000571688 NAALAD2Q9Y3Q0 740 aa16.79■□□□□ 0.28
LITAF-209ENST00000571688 EVPLQ92817 2033 aa16.79■□□□□ 0.28
LITAF-209ENST00000571688 TSC2P49815 1807 aa16.79■□□□□ 0.28
LITAF-209ENST00000571688 NUP205Q92621 2012 aa16.79■□□□□ 0.28
LITAF-209ENST00000571688 UBXN8O00124 270 aa16.79■□□□□ 0.28
LITAF-209ENST00000571688 DEAF1O75398 565 aaPredicted RBP16.79■□□□□ 0.28
LITAF-209ENST00000571688 PRSS23O95084 383 aa16.79■□□□□ 0.28
LITAF-209ENST00000571688 RBP1P09455 135 aa16.79■□□□□ 0.28
LITAF-209ENST00000571688 LTA4HP09960 611 aaKnown RBP16.79■□□□□ 0.28
LITAF-209ENST00000571688 TCF3P15923 654 aa16.79■□□□□ 0.28
LITAF-209ENST00000571688 PCMT1P22061 227 aa16.79■□□□□ 0.28
LITAF-209ENST00000571688 APLP1P51693 650 aa16.79■□□□□ 0.28
LITAF-209ENST00000571688 ECT2LQ008S8 904 aa16.79■□□□□ 0.28
LITAF-209ENST00000571688 EN1Q05925 392 aaPredicted RBP16.79■□□□□ 0.28
LITAF-209ENST00000571688 LAMC2Q13753 1193 aa16.79■□□□□ 0.28
LITAF-209ENST00000571688 RBM20Q5T481 1227 aaKnown RBP16.79■□□□□ 0.28
LITAF-209ENST00000571688 ATAD3BQ5T9A4 648 aa16.79■□□□□ 0.28
LITAF-209ENST00000571688 UGT3A1Q6NUS8 523 aa16.79■□□□□ 0.28
LITAF-209ENST00000571688 TRAPPC12Q8WVT3 735 aa16.79■□□□□ 0.28
LITAF-209ENST00000571688 NDRG1Q92597 394 aaKnown RBP16.79■□□□□ 0.28
LITAF-209ENST00000571688 L3HYPDHQ96EM0 354 aa16.79■□□□□ 0.28
LITAF-209ENST00000571688 TXNDC15Q96J42 360 aa16.79■□□□□ 0.28
LITAF-209ENST00000571688 DHRS1Q96LJ7 313 aa16.79■□□□□ 0.28
LITAF-209ENST00000571688 VAT1Q99536 393 aa16.79■□□□□ 0.28
LITAF-209ENST00000571688 IL12RB2Q99665 862 aa16.79■□□□□ 0.28
LITAF-209ENST00000571688 PARVBQ9HBI1 364 aa16.79■□□□□ 0.28
LITAF-209ENST00000571688 SDR39U1Q9NRG7 319 aaPredicted RBP16.79■□□□□ 0.28
LITAF-209ENST00000571688 GDAP2Q9NXN4 497 aa16.79■□□□□ 0.28
LITAF-209ENST00000571688 SCAF8Q9UPN6 1271 aaKnown RBP16.79■□□□□ 0.28
LITAF-209ENST00000571688 PCDHGA8Q9Y5G5 932 aa16.79■□□□□ 0.28
LITAF-209ENST00000571688 GOLGB1Q14789 3259 aaKnown RBP16.78■□□□□ 0.28
LITAF-209ENST00000571688 AURKAO14965 403 aa16.78■□□□□ 0.28
LITAF-209ENST00000571688 HCRTO43612 131 aa16.78■□□□□ 0.28
LITAF-209ENST00000571688 GRB7Q14451 532 aa16.78■□□□□ 0.28
LITAF-209ENST00000571688 AMHR2Q16671 573 aa16.78■□□□□ 0.28
LITAF-209ENST00000571688 IMPG1Q17R60 797 aa16.78■□□□□ 0.28
LITAF-209ENST00000571688 GEN1Q17RS7 908 aa16.78■□□□□ 0.28
LITAF-209ENST00000571688 AASDHQ4L235 1098 aaPredicted RBP16.78■□□□□ 0.28
LITAF-209ENST00000571688 ZNF678Q5SXM1 525 aa16.78■□□□□ 0.28
LITAF-209ENST00000571688 BLOC1S3Q6QNY0 202 aa16.78■□□□□ 0.28
LITAF-209ENST00000571688 NEK10Q6ZWH5 1172 aa16.78■□□□□ 0.28
LITAF-209ENST00000571688 CLYBLQ8N0X4 340 aa16.78■□□□□ 0.28
LITAF-209ENST00000571688 MTMR14Q8NCE2 650 aa16.78■□□□□ 0.28
LITAF-209ENST00000571688 OR6Q1Q8NGQ2 317 aa16.78■□□□□ 0.28
LITAF-209ENST00000571688 DNAJB14Q8TBM8 379 aa16.78■□□□□ 0.28
LITAF-209ENST00000571688 FAM149B1Q96BN6 582 aa16.78■□□□□ 0.28
LITAF-209ENST00000571688 ZMAT2Q96NC0 199 aaKnown RBP16.78■□□□□ 0.28
LITAF-209ENST00000571688 CYP2S1Q96SQ9 504 aa16.78■□□□□ 0.28
LITAF-209ENST00000571688 NPY6RQ99463 290 aa16.78■□□□□ 0.28
LITAF-209ENST00000571688 DNAJC15Q9Y5T4 150 aa16.78■□□□□ 0.28
LITAF-209ENST00000571688 NUAK1O60285 661 aa16.78■□□□□ 0.28
LITAF-209ENST00000571688 MGEA5O60502 916 aa16.78■□□□□ 0.28
LITAF-209ENST00000571688 INMTO95050 263 aa16.78■□□□□ 0.28
LITAF-209ENST00000571688 NTRK1P04629 796 aa16.78■□□□□ 0.28
LITAF-209ENST00000571688 MMP10P09238 476 aa16.78■□□□□ 0.28
LITAF-209ENST00000571688 HRH2P25021 359 aa16.78■□□□□ 0.28
LITAF-209ENST00000571688 CLCN3P51790 818 aa16.78■□□□□ 0.28
LITAF-209ENST00000571688 CLCQ05315 142 aa16.78■□□□□ 0.28
LITAF-209ENST00000571688 PIGFQ07326 219 aa16.78■□□□□ 0.28
LITAF-209ENST00000571688 ILF2Q12905 390 aaKnown RBP16.78■□□□□ 0.28
LITAF-209ENST00000571688 SEMA3BQ13214 749 aa16.78■□□□□ 0.28
LITAF-209ENST00000571688 POU6F1Q14863 301 aa16.78■□□□□ 0.28
LITAF-209ENST00000571688 FAM187BQ17R55 369 aa16.78■□□□□ 0.28
LITAF-209ENST00000571688 ZNF470Q6ECI4 717 aa16.78■□□□□ 0.28
LITAF-209ENST00000571688 UNC93AQ86WB7 457 aa16.78■□□□□ 0.28
LITAF-209ENST00000571688 ARMC8Q8IUR7 673 aa16.78■□□□□ 0.28
LITAF-209ENST00000571688 ZNF280CQ8ND82 737 aa16.78■□□□□ 0.28
LITAF-209ENST00000571688 AURKBQ96GD4 344 aaPredicted RBP16.78■□□□□ 0.28
LITAF-209ENST00000571688 HSFY1Q96LI6 401 aa16.78■□□□□ 0.28
LITAF-209ENST00000571688 RNF145Q96MT1 663 aa16.78■□□□□ 0.28
LITAF-209ENST00000571688 CPNE5Q9HCH3 593 aa16.78■□□□□ 0.28
LITAF-209ENST00000571688 SBF1O95248 1867 aa16.78■□□□□ 0.28
LITAF-209ENST00000571688 RGS13O14921 159 aa16.77■□□□□ 0.28
LITAF-209ENST00000571688 SLC22A1O15245 554 aa16.77■□□□□ 0.28
LITAF-209ENST00000571688 HUS1O60921 280 aa16.77■□□□□ 0.28
LITAF-209ENST00000571688 NDUFS2O75306 463 aa16.77■□□□□ 0.28
LITAF-209ENST00000571688 SUPT7LO94864 414 aa16.77■□□□□ 0.28
LITAF-209ENST00000571688 EEFSECP57772 596 aaKnown RBP16.77■□□□□ 0.28
LITAF-209ENST00000571688 NFYCQ13952 458 aa16.77■□□□□ 0.28
LITAF-209ENST00000571688 ACAP2Q15057 778 aa16.77■□□□□ 0.28
LITAF-209ENST00000571688 FXNQ16595 210 aa16.77■□□□□ 0.28
LITAF-209ENST00000571688 PAGE2BQ5JRK9 111 aa16.77■□□□□ 0.28
LITAF-209ENST00000571688 INTS6LQ5JSJ4 861 aaKnown RBP16.77■□□□□ 0.28
LITAF-209ENST00000571688 TTC23Q5W5X9 447 aa16.77■□□□□ 0.28
LITAF-209ENST00000571688 OR7A2PQ8NGA2 310 aa16.77■□□□□ 0.28
LITAF-209ENST00000571688 OR6B3Q8NGW1 331 aa16.77■□□□□ 0.28
LITAF-209ENST00000571688 DPF3Q92784 378 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms