RNA–Protein interactions for RNA: ENST00000570756.5

SMG6-207, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 2,426 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-207ENST00000570756 CHID1Q9BWS9 393 aa15.39■□□□□ 0.05
SMG6-207ENST00000570756 HOXC10Q9NYD6 342 aa15.39■□□□□ 0.05
SMG6-207ENST00000570756 SNX5Q9Y5X3 404 aa15.39■□□□□ 0.05
SMG6-207ENST00000570756 SHROOM3Q8TF72 1996 aa15.39■□□□□ 0.05
SMG6-207ENST00000570756 FAM72CH0Y354 149 aa15.39■□□□□ 0.05
SMG6-207ENST00000570756 HBP1O60381 514 aa15.39■□□□□ 0.05
SMG6-207ENST00000570756 PTPN2P17706 415 aa15.39■□□□□ 0.05
SMG6-207ENST00000570756 ARNTP27540 789 aa15.39■□□□□ 0.05
SMG6-207ENST00000570756 SHMT2P34897 504 aa15.39■□□□□ 0.05
SMG6-207ENST00000570756 TPD52P55327 224 aaPredicted RBP15.39■□□□□ 0.05
SMG6-207ENST00000570756 LIPEQ05469 1076 aa15.39■□□□□ 0.05
SMG6-207ENST00000570756 NFYCQ13952 458 aa15.39■□□□□ 0.05
SMG6-207ENST00000570756 POLD3Q15054 466 aaPredicted RBP15.39■□□□□ 0.05
SMG6-207ENST00000570756 MAPRE1Q15691 268 aaKnown RBP15.39■□□□□ 0.05
SMG6-207ENST00000570756 FAM72AQ5TYM5 149 aa15.39■□□□□ 0.05
SMG6-207ENST00000570756 FAM72DQ6L9T8 149 aa15.39■□□□□ 0.05
SMG6-207ENST00000570756 PLEKHG7Q6ZR37 379 aa15.39■□□□□ 0.05
SMG6-207ENST00000570756 SLCO6A1Q86UG4 719 aa15.39■□□□□ 0.05
SMG6-207ENST00000570756 FAM72BQ86X60 149 aa15.39■□□□□ 0.05
SMG6-207ENST00000570756 CLEC4FQ8N1N0 589 aa15.39■□□□□ 0.05
SMG6-207ENST00000570756 CRYBG2Q8N1P7 616 aa15.39■□□□□ 0.05
SMG6-207ENST00000570756 LRRC52Q8N7C0 313 aa15.39■□□□□ 0.05
SMG6-207ENST00000570756 NTAN1Q96AB6 310 aa15.39■□□□□ 0.05
SMG6-207ENST00000570756 BTN2A3PQ96KV6 586 aa15.39■□□□□ 0.05
SMG6-207ENST00000570756 RDH12Q96NR8 316 aa15.39■□□□□ 0.05
SMG6-207ENST00000570756 HERC2P3Q9BVR0 1158 aa15.39■□□□□ 0.05
SMG6-207ENST00000570756 TPK1Q9H3S4 243 aa15.39■□□□□ 0.05
SMG6-207ENST00000570756 SDR39U1Q9NRG7 319 aaPredicted RBP15.39■□□□□ 0.05
SMG6-207ENST00000570756 PIGVQ9NUD9 493 aa15.39■□□□□ 0.05
SMG6-207ENST00000570756 ATP11BQ9Y2G3 1177 aa15.39■□□□□ 0.05
SMG6-207ENST00000570756 PCDHGA11Q9Y5H2 935 aa15.39■□□□□ 0.05
SMG6-207ENST00000570756 FNDC1Q4ZHG4 1894 aaPredicted RBP15.39■□□□□ 0.05
SMG6-207ENST00000570756 FAM47E-STBD1D6RA91 191 aa15.38■□□□□ 0.05
SMG6-207ENST00000570756 MYO1DO94832 1006 aa15.38■□□□□ 0.05
SMG6-207ENST00000570756 PTPRAP18433 802 aa15.38■□□□□ 0.05
SMG6-207ENST00000570756 EDNRBP24530 442 aa15.38■□□□□ 0.05
SMG6-207ENST00000570756 EEFSECP57772 596 aaKnown RBP15.38■□□□□ 0.05
SMG6-207ENST00000570756 SCAPQ12770 1279 aa15.38■□□□□ 0.05
SMG6-207ENST00000570756 EPS8Q12929 822 aa15.38■□□□□ 0.05
SMG6-207ENST00000570756 LAMC2Q13753 1193 aa15.38■□□□□ 0.05
SMG6-207ENST00000570756 CRY1Q16526 586 aa15.38■□□□□ 0.05
SMG6-207ENST00000570756 GEN1Q17RS7 908 aa15.38■□□□□ 0.05
SMG6-207ENST00000570756 UGT3A2Q3SY77 523 aa15.38■□□□□ 0.05
SMG6-207ENST00000570756 ZNF678Q5SXM1 525 aa15.38■□□□□ 0.05
SMG6-207ENST00000570756 TBPL2Q6SJ96 375 aa15.38■□□□□ 0.05
SMG6-207ENST00000570756 CATSPERGQ6ZRH7 1159 aa15.38■□□□□ 0.05
SMG6-207ENST00000570756 SLC16A12Q6ZSM3 486 aa15.38■□□□□ 0.05
SMG6-207ENST00000570756 SLC7A5P1Q8MH63 180 aa15.38■□□□□ 0.05
SMG6-207ENST00000570756 SLC2A14Q8TDB8 520 aa15.38■□□□□ 0.05
SMG6-207ENST00000570756 MUL1Q969V5 352 aa15.38■□□□□ 0.05
SMG6-207ENST00000570756 AURKBQ96GD4 344 aaPredicted RBP15.38■□□□□ 0.05
SMG6-207ENST00000570756 SEPHS2Q99611 448 aa15.38■□□□□ 0.05
SMG6-207ENST00000570756 PDE10AQ9Y233 779 aa15.38■□□□□ 0.05
SMG6-207ENST00000570756 EVPLQ92817 2033 aa15.38■□□□□ 0.05
SMG6-207ENST00000570756 A0A087WZ62 844 aa15.38■□□□□ 0.05
SMG6-207ENST00000570756 H0Y858 1186 aa15.38■□□□□ 0.05
SMG6-207ENST00000570756 LSM1O15116 133 aaKnown RBP15.38■□□□□ 0.05
SMG6-207ENST00000570756 ANXA9O76027 345 aa15.38■□□□□ 0.05
SMG6-207ENST00000570756 NCAM1P13591 858 aa15.38■□□□□ 0.05
SMG6-207ENST00000570756 NCK1P16333 377 aa15.38■□□□□ 0.05
SMG6-207ENST00000570756 CLCN5P51795 746 aa15.38■□□□□ 0.05
SMG6-207ENST00000570756 SEMA3BQ13214 749 aa15.38■□□□□ 0.05
SMG6-207ENST00000570756 TOP3AQ13472 1001 aaPredicted RBP15.38■□□□□ 0.05
SMG6-207ENST00000570756 FSCN1Q16658 493 aaKnown RBP15.38■□□□□ 0.05
SMG6-207ENST00000570756 KIAA0930Q6ICG6 404 aaPredicted RBP15.38■□□□□ 0.05
SMG6-207ENST00000570756 TMEM214Q6NUQ4 689 aaKnown RBP15.38■□□□□ 0.05
SMG6-207ENST00000570756 BLOC1S3Q6QNY0 202 aa15.38■□□□□ 0.05
SMG6-207ENST00000570756 ITIH5Q86UX2 942 aa15.38■□□□□ 0.05
SMG6-207ENST00000570756 IFNLR1Q8IU57 520 aaPredicted RBP15.38■□□□□ 0.05
SMG6-207ENST00000570756 KLHDC8BQ8IXV7 354 aa15.38■□□□□ 0.05
SMG6-207ENST00000570756 ZCCHC7Q8N3Z6 543 aaKnown RBP15.38■□□□□ 0.05
SMG6-207ENST00000570756 NDRG1Q92597 394 aaKnown RBP15.38■□□□□ 0.05
SMG6-207ENST00000570756 SDCCAG3Q96C92 435 aa15.38■□□□□ 0.05
SMG6-207ENST00000570756 UBXN10Q96LJ8 280 aa15.38■□□□□ 0.05
SMG6-207ENST00000570756 RNF145Q96MT1 663 aa15.38■□□□□ 0.05
SMG6-207ENST00000570756 FDXACB1Q9BRP7 624 aaPredicted RBP15.38■□□□□ 0.05
SMG6-207ENST00000570756 DGCR6LQ9BY27 220 aa15.38■□□□□ 0.05
SMG6-207ENST00000570756 ATP13A3Q9H7F0 1226 aa15.38■□□□□ 0.05
SMG6-207ENST00000570756 TLR9Q9NR96 1032 aa15.38■□□□□ 0.05
SMG6-207ENST00000570756 KLHL3Q9UH77 587 aa15.38■□□□□ 0.05
SMG6-207ENST00000570756 DERAQ9Y315 318 aa15.38■□□□□ 0.05
SMG6-207ENST00000570756 LOC285556D6RIA3 1793 aa15.38■□□□□ 0.05
SMG6-207ENST00000570756 DOCK1Q14185 1865 aa15.38■□□□□ 0.05
SMG6-207ENST00000570756 A0A1W2PP18 115 aa15.37■□□□□ 0.05
SMG6-207ENST00000570756 C19orf81C9J6K1 198 aa15.37■□□□□ 0.05
SMG6-207ENST00000570756 SLC22A1O15245 554 aa15.37■□□□□ 0.05
SMG6-207ENST00000570756 MSI1O43347 362 aaKnown RBP15.37■□□□□ 0.05
SMG6-207ENST00000570756 TBC1D4O60343 1298 aa15.37■□□□□ 0.05
SMG6-207ENST00000570756 HPRP00739 348 aa15.37■□□□□ 0.05
SMG6-207ENST00000570756 NTRK1P04629 796 aa15.37■□□□□ 0.05
SMG6-207ENST00000570756 ALPLP05186 524 aa15.37■□□□□ 0.05
SMG6-207ENST00000570756 LBPP18428 481 aa15.37■□□□□ 0.05
SMG6-207ENST00000570756 CHRM3P20309 590 aa15.37■□□□□ 0.05
SMG6-207ENST00000570756 HTR1BP28222 390 aa15.37■□□□□ 0.05
SMG6-207ENST00000570756 CLPPQ16740 277 aaPredicted RBP15.37■□□□□ 0.05
SMG6-207ENST00000570756 PIWIL3Q7Z3Z3 882 aaKnown RBP15.37■□□□□ 0.05
SMG6-207ENST00000570756 OR7A2PQ8NGA2 310 aa15.37■□□□□ 0.05
SMG6-207ENST00000570756 DNAJB14Q8TBM8 379 aa15.37■□□□□ 0.05
SMG6-207ENST00000570756 TRPM4Q8TD43 1214 aa15.37■□□□□ 0.05
SMG6-207ENST00000570756 CALML6Q8TD86 181 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms