RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 CT55Q8WUE5 264 aa10.38□□□□□ -0.75
CTDNEP1-202ENST00000570380 ECHDC3Q96DC8 303 aa10.38□□□□□ -0.75
CTDNEP1-202ENST00000570380 SNRNP40Q96DI7 357 aaKnown RBP10.38□□□□□ -0.75
CTDNEP1-202ENST00000570380 NUS1Q96E22 293 aa10.38□□□□□ -0.75
CTDNEP1-202ENST00000570380 SPATA32Q96LK8 384 aa10.38□□□□□ -0.75
CTDNEP1-202ENST00000570380 TUBGCP5Q96RT8 1024 aa10.38□□□□□ -0.75
CTDNEP1-202ENST00000570380 RANBP9Q96S59 729 aa10.38□□□□□ -0.75
CTDNEP1-202ENST00000570380 RUFY1Q96T51 708 aa10.38□□□□□ -0.75
CTDNEP1-202ENST00000570380 CRACR2AQ9BSW2 395 aa10.38□□□□□ -0.75
CTDNEP1-202ENST00000570380 ACTL8Q9H568 366 aa10.38□□□□□ -0.75
CTDNEP1-202ENST00000570380 ACSS2Q9NR19 701 aa10.38□□□□□ -0.75
CTDNEP1-202ENST00000570380 PADI1Q9ULC6 663 aa10.38□□□□□ -0.75
CTDNEP1-202ENST00000570380 ENTPD4Q9Y227 616 aa10.38□□□□□ -0.75
CTDNEP1-202ENST00000570380 ZNF451Q9Y4E5 1061 aa10.38□□□□□ -0.75
CTDNEP1-202ENST00000570380 PIKFYVEQ9Y2I7 2098 aa10.38□□□□□ -0.75
CTDNEP1-202ENST00000570380 GOLGA6L3A6NEY3 463 aa10.37□□□□□ -0.75
CTDNEP1-202ENST00000570380 ARGFXA6NJG6 315 aa10.37□□□□□ -0.75
CTDNEP1-202ENST00000570380 RASA4BC9J798 803 aa10.37□□□□□ -0.75
CTDNEP1-202ENST00000570380 RASA4O43374 803 aa10.37□□□□□ -0.75
CTDNEP1-202ENST00000570380 DPM1O60762 260 aa10.37□□□□□ -0.75
CTDNEP1-202ENST00000570380 LRCH4O75427 683 aa10.37□□□□□ -0.75
CTDNEP1-202ENST00000570380 ANKRD34CP0C6C1 535 aa10.37□□□□□ -0.75
CTDNEP1-202ENST00000570380 CCNYL3P0C7X3 344 aa10.37□□□□□ -0.75
CTDNEP1-202ENST00000570380 CD44P16070 742 aaKnown RBP10.37□□□□□ -0.75
CTDNEP1-202ENST00000570380 SLC9A1P19634 815 aa10.37□□□□□ -0.75
CTDNEP1-202ENST00000570380 SERPINA4P29622 427 aa10.37□□□□□ -0.75
CTDNEP1-202ENST00000570380 CDH5P33151 784 aaPredicted RBP10.37□□□□□ -0.75
CTDNEP1-202ENST00000570380 GARSP41250 739 aaKnown RBP10.37□□□□□ -0.75
CTDNEP1-202ENST00000570380 MAPK9P45984 424 aa10.37□□□□□ -0.75
CTDNEP1-202ENST00000570380 YBEYP58557 167 aaPredicted RBP10.37□□□□□ -0.75
CTDNEP1-202ENST00000570380 SH3BP2P78314 561 aa10.37□□□□□ -0.75
CTDNEP1-202ENST00000570380 HHEXQ03014 270 aa10.37□□□□□ -0.75
CTDNEP1-202ENST00000570380 CHRNA6Q15825 494 aa10.37□□□□□ -0.75
CTDNEP1-202ENST00000570380 CDO1Q16878 200 aa10.37□□□□□ -0.75
CTDNEP1-202ENST00000570380 UGT8Q16880 541 aa10.37□□□□□ -0.75
CTDNEP1-202ENST00000570380 C15orf59Q2T9L4 293 aaPredicted RBP10.37□□□□□ -0.75
CTDNEP1-202ENST00000570380 ERICH6BQ5W0A0 696 aa10.37□□□□□ -0.75
CTDNEP1-202ENST00000570380 SP5Q6BEB4 398 aaPredicted RBP10.37□□□□□ -0.75
CTDNEP1-202ENST00000570380 TTI2Q6NXR4 508 aa10.37□□□□□ -0.75
CTDNEP1-202ENST00000570380 DOK6Q6PKX4 331 aa10.37□□□□□ -0.75
CTDNEP1-202ENST00000570380 SRLQ86TD4 932 aa10.37□□□□□ -0.75
CTDNEP1-202ENST00000570380 RASGRP3Q8IV61 690 aa10.37□□□□□ -0.75
CTDNEP1-202ENST00000570380 MCEMP1Q8IX19 187 aa10.37□□□□□ -0.75
CTDNEP1-202ENST00000570380 CCDC185Q8N715 623 aa10.37□□□□□ -0.75
CTDNEP1-202ENST00000570380 EMC1Q8N766 993 aa10.37□□□□□ -0.75
CTDNEP1-202ENST00000570380 RTL3Q8N8U3 475 aaKnown RBP10.37□□□□□ -0.75
CTDNEP1-202ENST00000570380 TMEM35BQ8NCS4 154 aa10.37□□□□□ -0.75
CTDNEP1-202ENST00000570380 THAP4Q8WY91 577 aa10.37□□□□□ -0.75
CTDNEP1-202ENST00000570380 PNPLA2Q96AD5 504 aa10.37□□□□□ -0.75
CTDNEP1-202ENST00000570380 DHTKD1Q96HY7 919 aaPredicted RBP10.37□□□□□ -0.75
CTDNEP1-202ENST00000570380 ELMO2Q96JJ3 720 aa10.37□□□□□ -0.75
CTDNEP1-202ENST00000570380 FAM81BQ96LP2 452 aa10.37□□□□□ -0.75
CTDNEP1-202ENST00000570380 NSMCE3Q96MG7 304 aa10.37□□□□□ -0.75
CTDNEP1-202ENST00000570380 GSDMAQ96QA5 445 aa10.37□□□□□ -0.75
CTDNEP1-202ENST00000570380 OR2M4Q96R27 311 aa10.37□□□□□ -0.75
CTDNEP1-202ENST00000570380 OR6C1Q96RD1 312 aa10.37□□□□□ -0.75
CTDNEP1-202ENST00000570380 ING2Q9H160 280 aa10.37□□□□□ -0.75
CTDNEP1-202ENST00000570380 ATP13A3Q9H7F0 1226 aa10.37□□□□□ -0.75
CTDNEP1-202ENST00000570380 PDFQ9HBH1 243 aa10.37□□□□□ -0.75
CTDNEP1-202ENST00000570380 SARS2Q9NP81 518 aaKnown RBP10.37□□□□□ -0.75
CTDNEP1-202ENST00000570380 LHX9Q9NQ69 397 aa10.37□□□□□ -0.75
CTDNEP1-202ENST00000570380 ASF1BQ9NVP2 202 aa10.37□□□□□ -0.75
CTDNEP1-202ENST00000570380 UBA2Q9UBT2 640 aaPredicted RBP10.37□□□□□ -0.75
CTDNEP1-202ENST00000570380 LNPEPQ9UIQ6 1025 aa10.37□□□□□ -0.75
CTDNEP1-202ENST00000570380 AJAP1Q9UKB5 411 aaPredicted RBP10.37□□□□□ -0.75
CTDNEP1-202ENST00000570380 PCDHGB7Q9Y5F8 929 aa10.37□□□□□ -0.75
CTDNEP1-202ENST00000570380 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.37□□□□□ -0.75
CTDNEP1-202ENST00000570380 MN1Q10571 1320 aaPredicted RBP10.36□□□□□ -0.75
CTDNEP1-202ENST00000570380 NAV3Q8IVL0 2385 aa10.36□□□□□ -0.75
CTDNEP1-202ENST00000570380 ANKUB1A6NFN9 424 aa10.36□□□□□ -0.75
CTDNEP1-202ENST00000570380 C21orf140B9A014 251 aa10.36□□□□□ -0.75
CTDNEP1-202ENST00000570380 J3KR12 359 aa10.36□□□□□ -0.75
CTDNEP1-202ENST00000570380 PSMA7O14818 248 aa10.36□□□□□ -0.75
CTDNEP1-202ENST00000570380 SPAG6O75602 509 aa10.36□□□□□ -0.75
CTDNEP1-202ENST00000570380 CEACAM4O75871 244 aa10.36□□□□□ -0.75
CTDNEP1-202ENST00000570380 PNMA6AP0CW24 399 aaPredicted RBP10.36□□□□□ -0.75
CTDNEP1-202ENST00000570380 CSNK1DP48730 415 aa10.36□□□□□ -0.75
CTDNEP1-202ENST00000570380 EPHA4P54764 986 aa10.36□□□□□ -0.75
CTDNEP1-202ENST00000570380 GFERP55789 205 aa10.36□□□□□ -0.75
CTDNEP1-202ENST00000570380 RPS18P62269 152 aaKnown RBP10.36□□□□□ -0.75
CTDNEP1-202ENST00000570380 POLR2LP62875 67 aaKnown RBP10.36□□□□□ -0.75
CTDNEP1-202ENST00000570380 IL11RAQ14626 422 aa10.36□□□□□ -0.75
CTDNEP1-202ENST00000570380 CNGA3Q16281 694 aa10.36□□□□□ -0.75
CTDNEP1-202ENST00000570380 CCDC14Q49A88 953 aa10.36□□□□□ -0.75
CTDNEP1-202ENST00000570380 PYCR3Q53H96 274 aa10.36□□□□□ -0.75
CTDNEP1-202ENST00000570380 DENND2CQ68D51 928 aa10.36□□□□□ -0.75
CTDNEP1-202ENST00000570380 ARCQ7LC44 396 aa10.36□□□□□ -0.75
CTDNEP1-202ENST00000570380 CBARPQ8N350 705 aaPredicted RBP10.36□□□□□ -0.75
CTDNEP1-202ENST00000570380 TSEN2Q8NCE0 465 aaKnown RBP10.36□□□□□ -0.75
CTDNEP1-202ENST00000570380 DTD2Q96FN9 168 aa10.36□□□□□ -0.75
CTDNEP1-202ENST00000570380 C9orf72Q96LT7 481 aa10.36□□□□□ -0.75
CTDNEP1-202ENST00000570380 TBC1D10AQ9BXI6 508 aa10.36□□□□□ -0.75
CTDNEP1-202ENST00000570380 AKIRIN1Q9H9L7 192 aaPredicted RBP10.36□□□□□ -0.75
CTDNEP1-202ENST00000570380 B4GALT6Q9UBX8 382 aa10.36□□□□□ -0.75
CTDNEP1-202ENST00000570380 APEX2Q9UBZ4 518 aa10.36□□□□□ -0.75
CTDNEP1-202ENST00000570380 TMEM98Q9Y2Y6 226 aa10.36□□□□□ -0.75
CTDNEP1-202ENST00000570380 FER1L5A0AVI2 2057 aa10.36□□□□□ -0.75
CTDNEP1-202ENST00000570380 MTORP42345 2549 aa10.36□□□□□ -0.75
CTDNEP1-202ENST00000570380 CCDC168Q8NDH2 2452 aa10.35□□□□□ -0.75
CTDNEP1-202ENST00000570380 CCDC88CQ9P219 2028 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms