RNA–Protein interactions for RNA: ENST00000569702.1

SHCBP1-207, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-207ENST00000569702 AGAP2Q99490 1192 aa11.04□□□□□ -0.64
SHCBP1-207ENST00000569702 FERMT1Q9BQL6 677 aa11.04□□□□□ -0.64
SHCBP1-207ENST00000569702 SCNM1Q9BWG6 230 aa11.04□□□□□ -0.64
SHCBP1-207ENST00000569702 GBA3Q9H227 469 aa11.04□□□□□ -0.64
SHCBP1-207ENST00000569702 CARD9Q9H257 536 aa11.04□□□□□ -0.64
SHCBP1-207ENST00000569702 ZFYVE1Q9HBF4 777 aa11.04□□□□□ -0.64
SHCBP1-207ENST00000569702 FGF22Q9HCT0 170 aa11.04□□□□□ -0.64
SHCBP1-207ENST00000569702 PHPT1Q9NRX4 125 aaPredicted RBP11.04□□□□□ -0.64
SHCBP1-207ENST00000569702 KLQ9UEF7 1012 aa11.04□□□□□ -0.64
SHCBP1-207ENST00000569702 RSPH14Q9UHP6 348 aa11.04□□□□□ -0.64
SHCBP1-207ENST00000569702 CD84Q9UIB8 345 aa11.04□□□□□ -0.64
SHCBP1-207ENST00000569702 R3HDM2Q9Y2K5 976 aaKnown RBP11.04□□□□□ -0.64
SHCBP1-207ENST00000569702 NEUROG3Q9Y4Z2 214 aa11.04□□□□□ -0.64
SHCBP1-207ENST00000569702 U3KQA8 63 aa11.04□□□□□ -0.64
SHCBP1-207ENST00000569702 KNTC1P50748 2209 aa11.04□□□□□ -0.64
SHCBP1-207ENST00000569702 WDFY3Q8IZQ1 3526 aa11.04□□□□□ -0.64
SHCBP1-207ENST00000569702 C5orf60A6NFR6 353 aa11.03□□□□□ -0.64
SHCBP1-207ENST00000569702 YY2O15391 372 aa11.03□□□□□ -0.64
SHCBP1-207ENST00000569702 TNFP01375 233 aa11.03□□□□□ -0.64
SHCBP1-207ENST00000569702 FUCA1P04066 466 aa11.03□□□□□ -0.64
SHCBP1-207ENST00000569702 CEACAM5P06731 702 aa11.03□□□□□ -0.64
SHCBP1-207ENST00000569702 PYGLP06737 847 aa11.03□□□□□ -0.64
SHCBP1-207ENST00000569702 CELA2BP08218 269 aaPredicted RBP11.03□□□□□ -0.64
SHCBP1-207ENST00000569702 PIRTP0C851 137 aa11.03□□□□□ -0.64
SHCBP1-207ENST00000569702 CDK4P11802 303 aa11.03□□□□□ -0.64
SHCBP1-207ENST00000569702 SPINK2P20155 84 aa11.03□□□□□ -0.64
SHCBP1-207ENST00000569702 GPR1P46091 355 aa11.03□□□□□ -0.64
SHCBP1-207ENST00000569702 C1orf61Q13536 156 aa11.03□□□□□ -0.64
SHCBP1-207ENST00000569702 ELOCQ15369 112 aa11.03□□□□□ -0.64
SHCBP1-207ENST00000569702 SLC1A5Q15758 541 aa11.03□□□□□ -0.64
SHCBP1-207ENST00000569702 DEFB133Q30KQ1 61 aa11.03□□□□□ -0.64
SHCBP1-207ENST00000569702 HS1BP3Q53T59 392 aa11.03□□□□□ -0.64
SHCBP1-207ENST00000569702 SIRPB2Q5JXA9 342 aa11.03□□□□□ -0.64
SHCBP1-207ENST00000569702 HENMT1Q5T8I9 393 aaKnown RBP11.03□□□□□ -0.64
SHCBP1-207ENST00000569702 CCDC70Q6NSX1 233 aa11.03□□□□□ -0.64
SHCBP1-207ENST00000569702 ZCCHC8Q6NZY4 707 aaKnown RBP11.03□□□□□ -0.64
SHCBP1-207ENST00000569702 LVRNQ6Q4G3 990 aa11.03□□□□□ -0.64
SHCBP1-207ENST00000569702 RD3Q7Z3Z2 195 aa11.03□□□□□ -0.64
SHCBP1-207ENST00000569702 SLC13A5Q86YT5 568 aaPredicted RBP11.03□□□□□ -0.64
SHCBP1-207ENST00000569702 KLHDC8BQ8IXV7 354 aa11.03□□□□□ -0.64
SHCBP1-207ENST00000569702 TRIM58Q8NG06 486 aa11.03□□□□□ -0.64
SHCBP1-207ENST00000569702 COX14Q96I36 57 aa11.03□□□□□ -0.64
SHCBP1-207ENST00000569702 PDLIM2Q96JY6 352 aa11.03□□□□□ -0.64
SHCBP1-207ENST00000569702 APOLD1Q96LR9 279 aa11.03□□□□□ -0.64
SHCBP1-207ENST00000569702 SPATA13Q96N96 652 aa11.03□□□□□ -0.64
SHCBP1-207ENST00000569702 ALS2CR12Q96Q35 445 aa11.03□□□□□ -0.64
SHCBP1-207ENST00000569702 RIOK2Q9BVS4 552 aaKnown RBP11.03□□□□□ -0.64
SHCBP1-207ENST00000569702 BOCQ9BWV1 1114 aa11.03□□□□□ -0.64
SHCBP1-207ENST00000569702 TLR10Q9BXR5 811 aa11.03□□□□□ -0.64
SHCBP1-207ENST00000569702 FRMD8Q9BZ67 464 aaPredicted RBP11.03□□□□□ -0.64
SHCBP1-207ENST00000569702 CDH19Q9H159 772 aa11.03□□□□□ -0.64
SHCBP1-207ENST00000569702 FAM83DQ9H4H8 585 aa11.03□□□□□ -0.64
SHCBP1-207ENST00000569702 MRPL40Q9NQ50 206 aaKnown RBP11.03□□□□□ -0.64
SHCBP1-207ENST00000569702 PKD2L2Q9NZM6 624 aa11.03□□□□□ -0.64
SHCBP1-207ENST00000569702 NFKBIL1Q9UBC1 381 aaPredicted RBP11.03□□□□□ -0.64
SHCBP1-207ENST00000569702 KLK13Q9UKR3 277 aa11.03□□□□□ -0.64
SHCBP1-207ENST00000569702 SHOC2Q9UQ13 582 aa11.03□□□□□ -0.64
SHCBP1-207ENST00000569702 SLC17A4Q9Y2C5 497 aa11.03□□□□□ -0.64
SHCBP1-207ENST00000569702 ZNF711Q9Y462 761 aa11.03□□□□□ -0.64
SHCBP1-207ENST00000569702 SPO11Q9Y5K1 396 aa11.03□□□□□ -0.64
SHCBP1-207ENST00000569702 FREM2Q5SZK8 3169 aa11.03□□□□□ -0.64
SHCBP1-207ENST00000569702 PRSS38A1L453 326 aa11.02□□□□□ -0.65
SHCBP1-207ENST00000569702 GOLGA6CA6NDK9 693 aa11.02□□□□□ -0.65
SHCBP1-207ENST00000569702 GOLGA6BA6NDN3 693 aa11.02□□□□□ -0.65
SHCBP1-207ENST00000569702 F5H423 210 aaPredicted RBP11.02□□□□□ -0.65
SHCBP1-207ENST00000569702 AURKAO14965 403 aa11.02□□□□□ -0.65
SHCBP1-207ENST00000569702 RFPL3O75679 317 aa11.02□□□□□ -0.65
SHCBP1-207ENST00000569702 ANXA9O76027 345 aa11.02□□□□□ -0.65
SHCBP1-207ENST00000569702 STK10O94804 968 aaKnown RBP11.02□□□□□ -0.65
SHCBP1-207ENST00000569702 PTMAP06454 111 aaKnown RBP11.02□□□□□ -0.65
SHCBP1-207ENST00000569702 ANXA6P08133 673 aa11.02□□□□□ -0.65
SHCBP1-207ENST00000569702 GOLGA6DP0CG33 693 aa11.02□□□□□ -0.65
SHCBP1-207ENST00000569702 CTSEP14091 401 aa11.02□□□□□ -0.65
SHCBP1-207ENST00000569702 HLA-DPA1P20036 260 aa11.02□□□□□ -0.65
SHCBP1-207ENST00000569702 PSMB4P28070 264 aa11.02□□□□□ -0.65
SHCBP1-207ENST00000569702 ADRA1AP35348 466 aa11.02□□□□□ -0.65
SHCBP1-207ENST00000569702 CHRNA4P43681 627 aa11.02□□□□□ -0.65
SHCBP1-207ENST00000569702 GEMP55040 296 aa11.02□□□□□ -0.65
SHCBP1-207ENST00000569702 DCDC1P59894 354 aa11.02□□□□□ -0.65
SHCBP1-207ENST00000569702 SMAD1Q15797 465 aaKnown RBP11.02□□□□□ -0.65
SHCBP1-207ENST00000569702 C6orf132Q5T0Z8 1188 aa11.02□□□□□ -0.65
SHCBP1-207ENST00000569702 SEL1L2Q5TEA6 688 aa11.02□□□□□ -0.65
SHCBP1-207ENST00000569702 RANBP10Q6VN20 620 aa11.02□□□□□ -0.65
SHCBP1-207ENST00000569702 TMPRSS7Q7RTY8 843 aa11.02□□□□□ -0.65
SHCBP1-207ENST00000569702 FAM71DQ8N9W8 422 aa11.02□□□□□ -0.65
SHCBP1-207ENST00000569702 GPR26Q8NDV2 337 aa11.02□□□□□ -0.65
SHCBP1-207ENST00000569702 IPMKQ8NFU5 416 aa11.02□□□□□ -0.65
SHCBP1-207ENST00000569702 CCDC110Q8TBZ0 833 aa11.02□□□□□ -0.65
SHCBP1-207ENST00000569702 SCARF2Q96GP6 870 aaPredicted RBP11.02□□□□□ -0.65
SHCBP1-207ENST00000569702 HIC2Q96JB3 615 aa11.02□□□□□ -0.65
SHCBP1-207ENST00000569702 TMEM121BQ9BXQ6 578 aaPredicted RBP11.02□□□□□ -0.65
SHCBP1-207ENST00000569702 FRMD8P1Q9BZ68 369 aaPredicted RBP11.02□□□□□ -0.65
SHCBP1-207ENST00000569702 GPR63Q9BZJ6 419 aa11.02□□□□□ -0.65
SHCBP1-207ENST00000569702 TMEM168Q9H0V1 697 aa11.02□□□□□ -0.65
SHCBP1-207ENST00000569702 TRABDQ9H4I3 376 aa11.02□□□□□ -0.65
SHCBP1-207ENST00000569702 CYP4F12Q9HCS2 524 aa11.02□□□□□ -0.65
SHCBP1-207ENST00000569702 GOLGA6AQ9NYA3 693 aa11.02□□□□□ -0.65
SHCBP1-207ENST00000569702 NCKIPSDQ9NZQ3 722 aa11.02□□□□□ -0.65
SHCBP1-207ENST00000569702 CNOT6Q9ULM6 557 aaKnown RBP11.02□□□□□ -0.65
SHCBP1-207ENST00000569702 AAR2Q9Y312 384 aaKnown RBP11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms