RNA–Protein interactions for RNA: ENST00000569122.1

SMG1-216, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-216ENST00000569122 BECN2A8MW95 431 aa8.62□□□□□ -1.03
SMG1-216ENST00000569122 KIR2DS3K7RE56 304 aa8.62□□□□□ -1.03
SMG1-216ENST00000569122 PSMD11O00231 422 aa8.62□□□□□ -1.03
SMG1-216ENST00000569122 DNAJB5O75953 348 aa8.62□□□□□ -1.03
SMG1-216ENST00000569122 KIAA0754O94854 1291 aa8.62□□□□□ -1.03
SMG1-216ENST00000569122 ITGA3P26006 1051 aa8.62□□□□□ -1.03
SMG1-216ENST00000569122 PTPN4P29074 926 aa8.62□□□□□ -1.03
SMG1-216ENST00000569122 EPHB2P29323 1055 aa8.62□□□□□ -1.03
SMG1-216ENST00000569122 SDC4P31431 198 aa8.62□□□□□ -1.03
SMG1-216ENST00000569122 NSUN2Q08J23 767 aaKnown RBP eCLIP8.62□□□□□ -1.03
SMG1-216ENST00000569122 RALGDSQ12967 914 aa8.62□□□□□ -1.03
SMG1-216ENST00000569122 KIR2DS5Q14953 304 aa8.62□□□□□ -1.03
SMG1-216ENST00000569122 NR6A1Q15406 480 aa8.62□□□□□ -1.03
SMG1-216ENST00000569122 CYTH1Q15438 398 aa8.62□□□□□ -1.03
SMG1-216ENST00000569122 SP5Q6BEB4 398 aaPredicted RBP8.62□□□□□ -1.03
SMG1-216ENST00000569122 RAET1GQ6H3X3 334 aa8.62□□□□□ -1.03
SMG1-216ENST00000569122 STRADAQ7RTN6 431 aa8.62□□□□□ -1.03
SMG1-216ENST00000569122 SRLQ86TD4 932 aa8.62□□□□□ -1.03
SMG1-216ENST00000569122 TMEM135Q86UB9 458 aa8.62□□□□□ -1.03
SMG1-216ENST00000569122 PPP1R3BQ86XI6 285 aa8.62□□□□□ -1.03
SMG1-216ENST00000569122 GALNT13Q8IUC8 556 aa8.62□□□□□ -1.03
SMG1-216ENST00000569122 TRIM59Q8IWR1 403 aa8.62□□□□□ -1.03
SMG1-216ENST00000569122 PDCD6IPQ8WUM4 868 aaKnown RBP8.62□□□□□ -1.03
SMG1-216ENST00000569122 SHC3Q92529 594 aa8.62□□□□□ -1.03
SMG1-216ENST00000569122 SMARCE1Q969G3 411 aa8.62□□□□□ -1.03
SMG1-216ENST00000569122 ECHDC3Q96DC8 303 aa8.62□□□□□ -1.03
SMG1-216ENST00000569122 EXOC2Q96KP1 924 aa8.62□□□□□ -1.03
SMG1-216ENST00000569122 C9orf72Q96LT7 481 aa8.62□□□□□ -1.03
SMG1-216ENST00000569122 COQ10AQ96MF6 247 aa8.62□□□□□ -1.03
SMG1-216ENST00000569122 CFAP57Q96MR6 1250 aa8.62□□□□□ -1.03
SMG1-216ENST00000569122 OR6C1Q96RD1 312 aa8.62□□□□□ -1.03
SMG1-216ENST00000569122 TRIM55Q9BYV6 548 aa8.62□□□□□ -1.03
SMG1-216ENST00000569122 SCAND2PQ9GZW5 306 aaPredicted RBP8.62□□□□□ -1.03
SMG1-216ENST00000569122 ACTL8Q9H568 366 aa8.62□□□□□ -1.03
SMG1-216ENST00000569122 PDE7BQ9NP56 450 aa8.62□□□□□ -1.03
SMG1-216ENST00000569122 LHX9Q9NQ69 397 aa8.62□□□□□ -1.03
SMG1-216ENST00000569122 SIDT1Q9NXL6 827 aaKnown RBP8.62□□□□□ -1.03
SMG1-216ENST00000569122 C5AR2Q9P296 337 aa8.62□□□□□ -1.03
SMG1-216ENST00000569122 RCOR3Q9P2K3 495 aaPredicted RBP8.62□□□□□ -1.03
SMG1-216ENST00000569122 LHX3Q9UBR4 397 aa8.62□□□□□ -1.03
SMG1-216ENST00000569122 APEX2Q9UBZ4 518 aa8.62□□□□□ -1.03
SMG1-216ENST00000569122 CNOT8Q9UFF9 292 aaKnown RBP8.62□□□□□ -1.03
SMG1-216ENST00000569122 KLHL3Q9UH77 587 aa8.62□□□□□ -1.03
SMG1-216ENST00000569122 TRBV23OR9-2A0A075B6M9 112 aa8.61□□□□□ -1.03
SMG1-216ENST00000569122 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.61□□□□□ -1.03
SMG1-216ENST00000569122 ARHGAP10A1A4S6 786 aa8.61□□□□□ -1.03
SMG1-216ENST00000569122 GOLGA6CA6NDK9 693 aa8.61□□□□□ -1.03
SMG1-216ENST00000569122 GOLGA6BA6NDN3 693 aa8.61□□□□□ -1.03
SMG1-216ENST00000569122 WASH4PA8MWX3 477 aa8.61□□□□□ -1.03
SMG1-216ENST00000569122 SPAG6O75602 509 aa8.61□□□□□ -1.03
SMG1-216ENST00000569122 PALMO75781 387 aa8.61□□□□□ -1.03
SMG1-216ENST00000569122 CEACAM4O75871 244 aa8.61□□□□□ -1.03
SMG1-216ENST00000569122 MAP3K6O95382 1288 aa8.61□□□□□ -1.03
SMG1-216ENST00000569122 LSM8O95777 96 aaKnown RBP8.61□□□□□ -1.03
SMG1-216ENST00000569122 FUCA1P04066 466 aa8.61□□□□□ -1.03
SMG1-216ENST00000569122 GOLGA6DP0CG33 693 aa8.61□□□□□ -1.03
SMG1-216ENST00000569122 CYP2A6P11509 494 aaPredicted RBP8.61□□□□□ -1.03
SMG1-216ENST00000569122 FGF5P12034 268 aa8.61□□□□□ -1.03
SMG1-216ENST00000569122 LPOP22079 712 aaPredicted RBP8.61□□□□□ -1.03
SMG1-216ENST00000569122 CDH5P33151 784 aaPredicted RBP8.61□□□□□ -1.03
SMG1-216ENST00000569122 HTR7P34969 479 aa8.61□□□□□ -1.03
SMG1-216ENST00000569122 FLT3P36888 993 aa8.61□□□□□ -1.03
SMG1-216ENST00000569122 MAPK9P45984 424 aa8.61□□□□□ -1.03
SMG1-216ENST00000569122 RENBPP51606 427 aa8.61□□□□□ -1.03
SMG1-216ENST00000569122 RRADP55042 308 aa8.61□□□□□ -1.03
SMG1-216ENST00000569122 ITGA1P56199 1179 aa8.61□□□□□ -1.03
SMG1-216ENST00000569122 ATP11AP98196 1134 aa8.61□□□□□ -1.03
SMG1-216ENST00000569122 DPTQ07507 201 aa8.61□□□□□ -1.03
SMG1-216ENST00000569122 NFATC2Q13469 925 aa8.61□□□□□ -1.03
SMG1-216ENST00000569122 RFTN1Q14699 578 aaPredicted RBP8.61□□□□□ -1.03
SMG1-216ENST00000569122 SLC6A19Q695T7 634 aa8.61□□□□□ -1.03
SMG1-216ENST00000569122 IYDQ6PHW0 289 aa8.61□□□□□ -1.03
SMG1-216ENST00000569122 TRIM65Q6PJ69 517 aa8.61□□□□□ -1.03
SMG1-216ENST00000569122 GBP6Q6ZN66 633 aa8.61□□□□□ -1.03
SMG1-216ENST00000569122 XYLT1Q86Y38 959 aa8.61□□□□□ -1.03
SMG1-216ENST00000569122 MCEMP1Q8IX19 187 aa8.61□□□□□ -1.03
SMG1-216ENST00000569122 UMODL1-AS1Q8N2C9 162 aa8.61□□□□□ -1.03
SMG1-216ENST00000569122 SPOCK2Q92563 424 aa8.61□□□□□ -1.03
SMG1-216ENST00000569122 NTAN1Q96AB6 310 aa8.61□□□□□ -1.03
SMG1-216ENST00000569122 MFRPQ9BY79 579 aa8.61□□□□□ -1.03
SMG1-216ENST00000569122 BRD8Q9H0E9 1235 aa8.61□□□□□ -1.03
SMG1-216ENST00000569122 UCK1Q9HA47 277 aa8.61□□□□□ -1.03
SMG1-216ENST00000569122 AGPAT4Q9NRZ5 378 aa8.61□□□□□ -1.03
SMG1-216ENST00000569122 GOLGA6AQ9NYA3 693 aa8.61□□□□□ -1.03
SMG1-216ENST00000569122 TMEM59LQ9UK28 342 aa8.61□□□□□ -1.03
SMG1-216ENST00000569122 ATP6V1DQ9Y5K8 247 aa8.61□□□□□ -1.03
SMG1-216ENST00000569122 ZFHX3Q15911 3703 aa8.61□□□□□ -1.03
SMG1-216ENST00000569122 MN1Q10571 1320 aaPredicted RBP8.6□□□□□ -1.03
SMG1-216ENST00000569122 ARHGAP42A6NI28 874 aa8.6□□□□□ -1.03
SMG1-216ENST00000569122 LILRA5A6NI73 299 aa8.6□□□□□ -1.03
SMG1-216ENST00000569122 ARGFXA6NJG6 315 aa8.6□□□□□ -1.03
SMG1-216ENST00000569122 GOLGA8SH3BPF8 625 aa8.6□□□□□ -1.03
SMG1-216ENST00000569122 FGF10O15520 208 aaPredicted RBP8.6□□□□□ -1.03
SMG1-216ENST00000569122 RASSF9O75901 435 aa8.6□□□□□ -1.03
SMG1-216ENST00000569122 C9P02748 559 aa8.6□□□□□ -1.03
SMG1-216ENST00000569122 ALPPP05187 535 aa8.6□□□□□ -1.03
SMG1-216ENST00000569122 PRKCSHP14314 528 aaPredicted RBP8.6□□□□□ -1.03
SMG1-216ENST00000569122 ZNF28P17035 718 aa8.6□□□□□ -1.03
SMG1-216ENST00000569122 AMD1P17707 334 aa8.6□□□□□ -1.03
SMG1-216ENST00000569122 VIPR1P32241 457 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms