RNA–Protein interactions for RNA: ENST00000567935.1

COMMD4-221, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-221ENST00000567935 SERPINE1P05121 402 aa14.6□□□□□ -0.07
COMMD4-221ENST00000567935 ATP5BP06576 529 aaKnown RBP14.6□□□□□ -0.07
COMMD4-221ENST00000567935 PABPC1P11940 636 aaKnown RBP14.6□□□□□ -0.07
COMMD4-221ENST00000567935 CPA3P15088 417 aa14.6□□□□□ -0.07
COMMD4-221ENST00000567935 CEBPBP17676 345 aa14.6□□□□□ -0.07
COMMD4-221ENST00000567935 SERPINA4P29622 427 aa14.6□□□□□ -0.07
COMMD4-221ENST00000567935 CD70P32970 193 aa14.6□□□□□ -0.07
COMMD4-221ENST00000567935 ARSDP51689 593 aa14.6□□□□□ -0.07
COMMD4-221ENST00000567935 STARD6P59095 220 aa14.6□□□□□ -0.07
COMMD4-221ENST00000567935 RAD51Q06609 339 aa14.6□□□□□ -0.07
COMMD4-221ENST00000567935 STX3Q13277 289 aa14.6□□□□□ -0.07
COMMD4-221ENST00000567935 CHI3L2Q15782 390 aa14.6□□□□□ -0.07
COMMD4-221ENST00000567935 SMAD1Q15797 465 aaKnown RBP14.6□□□□□ -0.07
COMMD4-221ENST00000567935 LPAL2Q16609 132 aa14.6□□□□□ -0.07
COMMD4-221ENST00000567935 LACTB2Q53H82 288 aaPredicted RBP14.6□□□□□ -0.07
COMMD4-221ENST00000567935 AARS2Q5JTZ9 985 aaKnown RBP14.6□□□□□ -0.07
COMMD4-221ENST00000567935 SPDYAQ5MJ70 313 aa14.6□□□□□ -0.07
COMMD4-221ENST00000567935 CGB2Q6NT52 195 aa14.6□□□□□ -0.07
COMMD4-221ENST00000567935 TSSK4Q6SA08 328 aa14.6□□□□□ -0.07
COMMD4-221ENST00000567935 TRPM8Q7Z2W7 1104 aa14.6□□□□□ -0.07
COMMD4-221ENST00000567935 KIAA0907Q7Z7F0 614 aaPredicted RBP14.6□□□□□ -0.07
COMMD4-221ENST00000567935 TMEM25Q86YD3 366 aa14.6□□□□□ -0.07
COMMD4-221ENST00000567935 ARID3BQ8IVW6 561 aaPredicted RBP14.6□□□□□ -0.07
COMMD4-221ENST00000567935 ST13P5Q8NFI4 369 aaPredicted RBP14.6□□□□□ -0.07
COMMD4-221ENST00000567935 OR2AP1Q8NGE2 309 aa14.6□□□□□ -0.07
COMMD4-221ENST00000567935 TTC8Q8TAM2 541 aa14.6□□□□□ -0.07
COMMD4-221ENST00000567935 WFIKKN2Q8TEU8 576 aa14.6□□□□□ -0.07
COMMD4-221ENST00000567935 BHMTQ93088 406 aa14.6□□□□□ -0.07
COMMD4-221ENST00000567935 CDKN2AIPNLQ96HQ2 116 aa14.6□□□□□ -0.07
COMMD4-221ENST00000567935 ELMO2Q96JJ3 720 aa14.6□□□□□ -0.07
COMMD4-221ENST00000567935 DNAJC1Q96KC8 554 aaKnown RBP14.6□□□□□ -0.07
COMMD4-221ENST00000567935 TBATAQ96M53 351 aa14.6□□□□□ -0.07
COMMD4-221ENST00000567935 C12orf65Q9H3J6 166 aaKnown RBP14.6□□□□□ -0.07
COMMD4-221ENST00000567935 FAM96AQ9H5X1 160 aa14.6□□□□□ -0.07
COMMD4-221ENST00000567935 NMRAL1Q9HBL8 299 aa14.6□□□□□ -0.07
COMMD4-221ENST00000567935 TMEM216Q9P0N5 145 aa14.6□□□□□ -0.07
COMMD4-221ENST00000567935 EPS15L1Q9UBC2 864 aa14.6□□□□□ -0.07
COMMD4-221ENST00000567935 MTF2Q9Y483 593 aaPredicted RBP14.6□□□□□ -0.07
COMMD4-221ENST00000567935 PCDHGC4Q9Y5F7 938 aa14.6□□□□□ -0.07
COMMD4-221ENST00000567935 ARL5AQ9Y689 179 aa14.6□□□□□ -0.07
COMMD4-221ENST00000567935 SETXQ7Z333 2677 aaKnown RBP14.6□□□□□ -0.07
COMMD4-221ENST00000567935 CCDC162PA2VCL2 907 aa14.59□□□□□ -0.07
COMMD4-221ENST00000567935 C1QTNF9BB2RNN3 333 aa14.59□□□□□ -0.07
COMMD4-221ENST00000567935 STX7O15400 261 aaKnown RBP14.59□□□□□ -0.07
COMMD4-221ENST00000567935 GDF9O60383 454 aa14.59□□□□□ -0.07
COMMD4-221ENST00000567935 SNNO75324 88 aaPredicted RBP14.59□□□□□ -0.07
COMMD4-221ENST00000567935 SNUPNO95149 360 aaKnown RBP14.59□□□□□ -0.07
COMMD4-221ENST00000567935 S1PR4O95977 384 aa14.59□□□□□ -0.07
COMMD4-221ENST00000567935 GOT2P00505 430 aaKnown RBP14.59□□□□□ -0.07
COMMD4-221ENST00000567935 C1QTNF9P0C862 333 aa14.59□□□□□ -0.07
COMMD4-221ENST00000567935 SLC35E2BP0CK96 405 aa14.59□□□□□ -0.07
COMMD4-221ENST00000567935 TYRP14679 529 aa14.59□□□□□ -0.07
COMMD4-221ENST00000567935 HLA-FP30511 346 aa14.59□□□□□ -0.07
COMMD4-221ENST00000567935 NTHL1P78549 312 aa14.59□□□□□ -0.07
COMMD4-221ENST00000567935 BST1Q10588 318 aa14.59□□□□□ -0.07
COMMD4-221ENST00000567935 SETDB1Q15047 1291 aa14.59□□□□□ -0.07
COMMD4-221ENST00000567935 PTAR1Q7Z6K3 402 aaPredicted RBP14.59□□□□□ -0.07
COMMD4-221ENST00000567935 TBC1D1Q86TI0 1168 aaPredicted RBP14.59□□□□□ -0.07
COMMD4-221ENST00000567935 CRLF3Q8IUI8 442 aa14.59□□□□□ -0.07
COMMD4-221ENST00000567935 SLC41A1Q8IVJ1 513 aa14.59□□□□□ -0.07
COMMD4-221ENST00000567935 AHI1Q8N157 1196 aa14.59□□□□□ -0.07
COMMD4-221ENST00000567935 GPATCH11Q8N954 259 aa14.59□□□□□ -0.07
COMMD4-221ENST00000567935 CCT6BQ92526 530 aa14.59□□□□□ -0.07
COMMD4-221ENST00000567935 CPEB1Q9BZB8 566 aaKnown RBP14.59□□□□□ -0.07
COMMD4-221ENST00000567935 FBXO6Q9NRD1 293 aaPredicted RBP14.59□□□□□ -0.07
COMMD4-221ENST00000567935 OBP2AQ9NY56 170 aa14.59□□□□□ -0.07
COMMD4-221ENST00000567935 PLK2Q9NYY3 685 aa14.59□□□□□ -0.07
COMMD4-221ENST00000567935 INTS6Q9UL03 887 aaKnown RBP14.59□□□□□ -0.07
COMMD4-221ENST00000567935 RRP15Q9Y3B9 282 aaKnown RBP14.59□□□□□ -0.07
COMMD4-221ENST00000567935 SPO11Q9Y5K1 396 aa14.59□□□□□ -0.07
COMMD4-221ENST00000567935 COMMD10Q9Y6G5 202 aa14.59□□□□□ -0.07
COMMD4-221ENST00000567935 TMEM114B3SHH9 223 aa14.58□□□□□ -0.08
COMMD4-221ENST00000567935 NEDD8-MDP1E9PL57 170 aa14.58□□□□□ -0.08
COMMD4-221ENST00000567935 HOXC11O43248 304 aaPredicted RBP14.58□□□□□ -0.08
COMMD4-221ENST00000567935 HAUS5O94927 633 aa14.58□□□□□ -0.08
COMMD4-221ENST00000567935 KLHL2O95198 593 aa14.58□□□□□ -0.08
COMMD4-221ENST00000567935 ADH1CP00326 375 aa14.58□□□□□ -0.08
COMMD4-221ENST00000567935 MT-CO1P00395 513 aa14.58□□□□□ -0.08
COMMD4-221ENST00000567935 ASLP04424 464 aa14.58□□□□□ -0.08
COMMD4-221ENST00000567935 PDHA1P08559 390 aa14.58□□□□□ -0.08
COMMD4-221ENST00000567935 SRCP12931 536 aa14.58□□□□□ -0.08
COMMD4-221ENST00000567935 STC1P52823 247 aa14.58□□□□□ -0.08
COMMD4-221ENST00000567935 CORO7P57737 925 aa14.58□□□□□ -0.08
COMMD4-221ENST00000567935 TAS2R39P59534 338 aa14.58□□□□□ -0.08
COMMD4-221ENST00000567935 OCRLQ01968 901 aa14.58□□□□□ -0.08
COMMD4-221ENST00000567935 PCLAFQ15004 111 aa14.58□□□□□ -0.08
COMMD4-221ENST00000567935 FAM83EQ2M2I3 478 aa14.58□□□□□ -0.08
COMMD4-221ENST00000567935 FUT11Q495W5 492 aa14.58□□□□□ -0.08
COMMD4-221ENST00000567935 LY6G5CQ5SRR4 150 aa14.58□□□□□ -0.08
COMMD4-221ENST00000567935 ATXN7L2Q5T6C5 722 aaPredicted RBP14.58□□□□□ -0.08
COMMD4-221ENST00000567935 AGAP9Q5VTM2 703 aa14.58□□□□□ -0.08
COMMD4-221ENST00000567935 MBLAC2Q68D91 279 aa14.58□□□□□ -0.08
COMMD4-221ENST00000567935 KLC3Q6P597 504 aa14.58□□□□□ -0.08
COMMD4-221ENST00000567935 C22orf39Q6P5X5 142 aa14.58□□□□□ -0.08
COMMD4-221ENST00000567935 CNSTQ6PJW8 725 aa14.58□□□□□ -0.08
COMMD4-221ENST00000567935 ADGRG2Q8IZP9 1017 aa14.58□□□□□ -0.08
COMMD4-221ENST00000567935 TTC30BQ8N4P2 665 aa14.58□□□□□ -0.08
COMMD4-221ENST00000567935 OR4K2Q8NGD2 314 aa14.58□□□□□ -0.08
COMMD4-221ENST00000567935 OR13C4Q8NGS5 318 aa14.58□□□□□ -0.08
COMMD4-221ENST00000567935 PPP4R1Q8TF05 950 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms