RNA–Protein interactions for RNA: ENST00000567365.2

RNF40-211, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-211ENST00000567365 FAXCQ5TGI0 409 aa12.37□□□□□ -0.43
RNF40-211ENST00000567365 DENND2CQ68D51 928 aa12.37□□□□□ -0.43
RNF40-211ENST00000567365 GPR26Q8NDV2 337 aa12.37□□□□□ -0.43
RNF40-211ENST00000567365 DTX3LQ8TDB6 740 aa12.37□□□□□ -0.43
RNF40-211ENST00000567365 AP2M1Q96CW1 435 aa12.37□□□□□ -0.43
RNF40-211ENST00000567365 TBATAQ96M53 351 aa12.37□□□□□ -0.43
RNF40-211ENST00000567365 NAPGQ99747 312 aaPredicted RBP12.37□□□□□ -0.43
RNF40-211ENST00000567365 APOL2Q9BQE5 337 aa12.37□□□□□ -0.43
RNF40-211ENST00000567365 RIOK2Q9BVS4 552 aaKnown RBP12.37□□□□□ -0.43
RNF40-211ENST00000567365 FRMD8Q9BZ67 464 aaPredicted RBP12.37□□□□□ -0.43
RNF40-211ENST00000567365 ETNK1Q9HBU6 452 aa12.37□□□□□ -0.43
RNF40-211ENST00000567365 FGF22Q9HCT0 170 aa12.37□□□□□ -0.43
RNF40-211ENST00000567365 HACD3Q9P035 362 aa12.37□□□□□ -0.43
RNF40-211ENST00000567365 IL17CQ9P0M4 197 aa12.37□□□□□ -0.43
RNF40-211ENST00000567365 CD84Q9UIB8 345 aa12.37□□□□□ -0.43
RNF40-211ENST00000567365 BTBD3Q9Y2F9 522 aa12.37□□□□□ -0.43
RNF40-211ENST00000567365 ERI2A8K979 691 aaKnown RBP12.36□□□□□ -0.43
RNF40-211ENST00000567365 FADS2P1A8MWK0 482 aa12.36□□□□□ -0.43
RNF40-211ENST00000567365 PDE2AO00408 941 aaPredicted RBP12.36□□□□□ -0.43
RNF40-211ENST00000567365 TNFRSF10CO14798 259 aa12.36□□□□□ -0.43
RNF40-211ENST00000567365 FLRT2O43155 660 aa12.36□□□□□ -0.43
RNF40-211ENST00000567365 SH3BP5O60239 455 aa12.36□□□□□ -0.43
RNF40-211ENST00000567365 PIAS2O75928 621 aa12.36□□□□□ -0.43
RNF40-211ENST00000567365 IFNB1P01574 187 aa12.36□□□□□ -0.43
RNF40-211ENST00000567365 FUCA1P04066 466 aa12.36□□□□□ -0.43
RNF40-211ENST00000567365 MYCLP1P12525 358 aaPredicted RBP12.36□□□□□ -0.43
RNF40-211ENST00000567365 BPIP17213 487 aa12.36□□□□□ -0.43
RNF40-211ENST00000567365 PSMA3P25788 255 aa12.36□□□□□ -0.43
RNF40-211ENST00000567365 FDFT1P37268 417 aa12.36□□□□□ -0.43
RNF40-211ENST00000567365 ARRB1P49407 418 aaPredicted RBP12.36□□□□□ -0.43
RNF40-211ENST00000567365 THOP1P52888 689 aa12.36□□□□□ -0.43
RNF40-211ENST00000567365 ETF1P62495 437 aaKnown RBP12.36□□□□□ -0.43
RNF40-211ENST00000567365 CDK3Q00526 305 aa12.36□□□□□ -0.43
RNF40-211ENST00000567365 IL9RQ01113 521 aa12.36□□□□□ -0.43
RNF40-211ENST00000567365 PTK2BQ14289 1009 aa12.36□□□□□ -0.43
RNF40-211ENST00000567365 SPARCL1Q14515 664 aa12.36□□□□□ -0.43
RNF40-211ENST00000567365 ALG11Q2TAA5 492 aa12.36□□□□□ -0.43
RNF40-211ENST00000567365 CCDC70Q6NSX1 233 aa12.36□□□□□ -0.43
RNF40-211ENST00000567365 HEATR4Q86WZ0 1026 aa12.36□□□□□ -0.43
RNF40-211ENST00000567365 GATAD2AQ86YP4 633 aa12.36□□□□□ -0.43
RNF40-211ENST00000567365 PDCD7Q8N8D1 485 aaKnown RBP12.36□□□□□ -0.43
RNF40-211ENST00000567365 CCHCR1Q8TD31 782 aa12.36□□□□□ -0.43
RNF40-211ENST00000567365 OR1E3Q8WZA6 343 aa12.36□□□□□ -0.43
RNF40-211ENST00000567365 SCARF2Q96GP6 870 aaPredicted RBP12.36□□□□□ -0.43
RNF40-211ENST00000567365 WDR92Q96MX6 357 aa12.36□□□□□ -0.43
RNF40-211ENST00000567365 NAP1L3Q99457 506 aaPredicted RBP12.36□□□□□ -0.43
RNF40-211ENST00000567365 C19orf43Q9BQ61 176 aa12.36□□□□□ -0.43
RNF40-211ENST00000567365 TBL1YQ9BQ87 522 aa12.36□□□□□ -0.43
RNF40-211ENST00000567365 FSD1LQ9BXM9 530 aa12.36□□□□□ -0.43
RNF40-211ENST00000567365 AP1M1Q9BXS5 423 aa12.36□□□□□ -0.43
RNF40-211ENST00000567365 TCEAL2Q9H3H9 227 aaPredicted RBP12.36□□□□□ -0.43
RNF40-211ENST00000567365 WDR26Q9H7D7 661 aa12.36□□□□□ -0.43
RNF40-211ENST00000567365 LRRC40Q9H9A6 602 aa12.36□□□□□ -0.43
RNF40-211ENST00000567365 PKD2L2Q9NZM6 624 aa12.36□□□□□ -0.43
RNF40-211ENST00000567365 PAK5Q9P286 719 aa12.36□□□□□ -0.43
RNF40-211ENST00000567365 FEZ2Q9UHY8 353 aaPredicted RBP12.36□□□□□ -0.43
RNF40-211ENST00000567365 PCOLCE2Q9UKZ9 415 aa12.36□□□□□ -0.43
RNF40-211ENST00000567365 TMPRSS11EQ9UL52 423 aa12.36□□□□□ -0.43
RNF40-211ENST00000567365 DGKBQ9Y6T7 804 aa12.36□□□□□ -0.43
RNF40-211ENST00000567365 GOLGA4Q13439 2230 aaKnown RBP12.35□□□□□ -0.43
RNF40-211ENST00000567365 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.35□□□□□ -0.43
RNF40-211ENST00000567365 CTAGE9A4FU28 777 aa12.35□□□□□ -0.43
RNF40-211ENST00000567365 GAPDHSO14556 408 aaPredicted RBP12.35□□□□□ -0.43
RNF40-211ENST00000567365 PSMD3O43242 534 aa12.35□□□□□ -0.43
RNF40-211ENST00000567365 LDB2O43679 373 aa12.35□□□□□ -0.43
RNF40-211ENST00000567365 PHF2O75151 1096 aa12.35□□□□□ -0.43
RNF40-211ENST00000567365 CEACAM5P06731 702 aa12.35□□□□□ -0.43
RNF40-211ENST00000567365 PYGLP06737 847 aa12.35□□□□□ -0.43
RNF40-211ENST00000567365 ADRB1P08588 477 aa12.35□□□□□ -0.43
RNF40-211ENST00000567365 DGKAP23743 735 aa12.35□□□□□ -0.43
RNF40-211ENST00000567365 COILP38432 576 aaPredicted RBP12.35□□□□□ -0.43
RNF40-211ENST00000567365 MAGEA6P43360 314 aa12.35□□□□□ -0.43
RNF40-211ENST00000567365 HNRNPKP61978 463 aaKnown RBP eCLIP12.35□□□□□ -0.43
RNF40-211ENST00000567365 HS1BP3Q53T59 392 aa12.35□□□□□ -0.43
RNF40-211ENST00000567365 ZNF542PQ5EBM4 170 aa12.35□□□□□ -0.43
RNF40-211ENST00000567365 C4orf22Q6V702 233 aa12.35□□□□□ -0.43
RNF40-211ENST00000567365 GLRX5Q86SX6 157 aa12.35□□□□□ -0.43
RNF40-211ENST00000567365 NAXDQ8IW45 347 aa12.35□□□□□ -0.43
RNF40-211ENST00000567365 RBFAQ8N0V3 343 aa12.35□□□□□ -0.43
RNF40-211ENST00000567365 ATL2Q8NHH9 583 aa12.35□□□□□ -0.43
RNF40-211ENST00000567365 BRSK1Q8TDC3 778 aa12.35□□□□□ -0.43
RNF40-211ENST00000567365 PTCD2Q8WV60 388 aaKnown RBP12.35□□□□□ -0.43
RNF40-211ENST00000567365 MAGOHBQ96A72 148 aaKnown RBP12.35□□□□□ -0.43
RNF40-211ENST00000567365 CAMK1GQ96NX5 476 aa12.35□□□□□ -0.43
RNF40-211ENST00000567365 PLEKHG4BQ96PX9 1271 aa12.35□□□□□ -0.43
RNF40-211ENST00000567365 GPR63Q9BZJ6 419 aa12.35□□□□□ -0.43
RNF40-211ENST00000567365 CDH19Q9H159 772 aa12.35□□□□□ -0.43
RNF40-211ENST00000567365 FAM83DQ9H4H8 585 aa12.35□□□□□ -0.43
RNF40-211ENST00000567365 RAB6BQ9NRW1 208 aa12.35□□□□□ -0.43
RNF40-211ENST00000567365 UCKL1Q9NWZ5 548 aa12.35□□□□□ -0.43
RNF40-211ENST00000567365 SLC17A4Q9Y2C5 497 aa12.35□□□□□ -0.43
RNF40-211ENST00000567365 SAR1BQ9Y6B6 198 aa12.35□□□□□ -0.43
RNF40-211ENST00000567365 PLXNB3Q9ULL4 1909 aa12.35□□□□□ -0.43
RNF40-211ENST00000567365 GOLGA6CA6NDK9 693 aa12.34□□□□□ -0.43
RNF40-211ENST00000567365 GOLGA6BA6NDN3 693 aa12.34□□□□□ -0.43
RNF40-211ENST00000567365 CACNB4O00305 520 aaPredicted RBP12.34□□□□□ -0.43
RNF40-211ENST00000567365 GIPC1O14908 333 aa12.34□□□□□ -0.43
RNF40-211ENST00000567365 SDC3O75056 442 aa12.34□□□□□ -0.43
RNF40-211ENST00000567365 DKK1O94907 266 aa12.34□□□□□ -0.43
RNF40-211ENST00000567365 KCNK5O95279 499 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms