RNA–Protein interactions for RNA: ENST00000566682.1

SPG7-215, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, human

TSL 3

Gene SPG7, Length 756 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPG7-215	ENST00000566682	AGAP2	Q99490	1192 aa		13.65	□□□□□ -0.22
SPG7-215	ENST00000566682	APOL2	Q9BQE5	337 aa		13.65	□□□□□ -0.22
SPG7-215	ENST00000566682	RIOK2	Q9BVS4	552 aa	Known RBP	13.65	□□□□□ -0.22
SPG7-215	ENST00000566682	SLC32A1	Q9H598	525 aa		13.65	□□□□□ -0.22
SPG7-215	ENST00000566682	HOMER3	Q9NSC5	361 aa		13.65	□□□□□ -0.22
SPG7-215	ENST00000566682	GOLGA6A	Q9NYA3	693 aa		13.65	□□□□□ -0.22
SPG7-215	ENST00000566682	BTBD3	Q9Y2F9	522 aa		13.65	□□□□□ -0.22
SPG7-215	ENST00000566682	SPTBN4	Q9H254	2564 aa		13.64	□□□□□ -0.23
SPG7-215	ENST00000566682	RGSL1	A5PLK6	1076 aa		13.64	□□□□□ -0.23
SPG7-215	ENST00000566682	CACNB4	O00305	520 aa	Predicted RBP	13.64	□□□□□ -0.23
SPG7-215	ENST00000566682	GIPC1	O14908	333 aa		13.64	□□□□□ -0.23
SPG7-215	ENST00000566682	ZNF185	O15231	689 aa		13.64	□□□□□ -0.23
SPG7-215	ENST00000566682	USP12	O75317	370 aa		13.64	□□□□□ -0.23
SPG7-215	ENST00000566682	PIAS2	O75928	621 aa		13.64	□□□□□ -0.23
SPG7-215	ENST00000566682	SLC4A1	P02730	911 aa		13.64	□□□□□ -0.23
SPG7-215	ENST00000566682	HOXC4	P09017	264 aa	Predicted RBP	13.64	□□□□□ -0.23
SPG7-215	ENST00000566682	CEACAM1	P13688	526 aa		13.64	□□□□□ -0.23
SPG7-215	ENST00000566682	NME1	P15531	152 aa	Known RBP	13.64	□□□□□ -0.23
SPG7-215	ENST00000566682	JUND	P17535	347 aa		13.64	□□□□□ -0.23
SPG7-215	ENST00000566682	DGKA	P23743	735 aa		13.64	□□□□□ -0.23
SPG7-215	ENST00000566682	ACTN2	P35609	894 aa		13.64	□□□□□ -0.23
SPG7-215	ENST00000566682	GPR1	P46091	355 aa		13.64	□□□□□ -0.23
SPG7-215	ENST00000566682	KCNJ1	P48048	391 aa		13.64	□□□□□ -0.23
SPG7-215	ENST00000566682	NOVA1	P51513	510 aa	Known RBP	13.64	□□□□□ -0.23
SPG7-215	ENST00000566682	HNRNPK	P61978	463 aa	Known RBP eCLIP	13.64	□□□□□ -0.23
SPG7-215	ENST00000566682	SPARCL1	Q14515	664 aa		13.64	□□□□□ -0.23
SPG7-215	ENST00000566682	KCTD11	Q693B1	232 aa		13.64	□□□□□ -0.23
SPG7-215	ENST00000566682	NYAP1	Q6ZVC0	841 aa		13.64	□□□□□ -0.23
SPG7-215	ENST00000566682	HEATR4	Q86WZ0	1026 aa		13.64	□□□□□ -0.23
SPG7-215	ENST00000566682	SLC25A45	Q8N413	288 aa		13.64	□□□□□ -0.23
SPG7-215	ENST00000566682	CCDC89	Q8N998	374 aa		13.64	□□□□□ -0.23
SPG7-215	ENST00000566682	GLIS1	Q8NBF1	620 aa		13.64	□□□□□ -0.23
SPG7-215	ENST00000566682	GPR26	Q8NDV2	337 aa		13.64	□□□□□ -0.23
SPG7-215	ENST00000566682	ACTRT1	Q8TDG2	376 aa		13.64	□□□□□ -0.23
SPG7-215	ENST00000566682	BLOC1S5	Q8TDH9	187 aa		13.64	□□□□□ -0.23
SPG7-215	ENST00000566682	TSACC	Q96A04	125 aa	Predicted RBP	13.64	□□□□□ -0.23
SPG7-215	ENST00000566682	WDR92	Q96MX6	357 aa		13.64	□□□□□ -0.23
SPG7-215	ENST00000566682	TBL1Y	Q9BQ87	522 aa		13.64	□□□□□ -0.23
SPG7-215	ENST00000566682	TEX101	Q9BY14	249 aa		13.64	□□□□□ -0.23
SPG7-215	ENST00000566682	FAM83D	Q9H4H8	585 aa		13.64	□□□□□ -0.23
SPG7-215	ENST00000566682	TRABD	Q9H4I3	376 aa		13.64	□□□□□ -0.23
SPG7-215	ENST00000566682	WDR26	Q9H7D7	661 aa		13.64	□□□□□ -0.23
SPG7-215	ENST00000566682	KCND1	Q9NSA2	647 aa		13.64	□□□□□ -0.23
SPG7-215	ENST00000566682	UCKL1	Q9NWZ5	548 aa		13.64	□□□□□ -0.23
SPG7-215	ENST00000566682	SMARCAL1	Q9NZC9	954 aa		13.64	□□□□□ -0.23
SPG7-215	ENST00000566682	HACD3	Q9P035	362 aa		13.64	□□□□□ -0.23
SPG7-215	ENST00000566682	PCOLCE2	Q9UKZ9	415 aa		13.64	□□□□□ -0.23
SPG7-215	ENST00000566682	ARID1B	Q8NFD5	2236 aa	Predicted RBP	13.63	□□□□□ -0.23
SPG7-215	ENST00000566682	TMEM202	A6NGA9	273 aa		13.63	□□□□□ -0.23
SPG7-215	ENST00000566682		H3BM21	787 aa		13.63	□□□□□ -0.23
SPG7-215	ENST00000566682	PGRMC1	O00264	195 aa	Known RBP	13.63	□□□□□ -0.23
SPG7-215	ENST00000566682	CES2	O00748	559 aa		13.63	□□□□□ -0.23
SPG7-215	ENST00000566682	PSMD3	O43242	534 aa		13.63	□□□□□ -0.23
SPG7-215	ENST00000566682	CBFA2T3	O75081	653 aa		13.63	□□□□□ -0.23
SPG7-215	ENST00000566682	SOD1	P00441	154 aa		13.63	□□□□□ -0.23
SPG7-215	ENST00000566682	PYGL	P06737	847 aa		13.63	□□□□□ -0.23
SPG7-215	ENST00000566682	MYCLP1	P12525	358 aa	Predicted RBP	13.63	□□□□□ -0.23
SPG7-215	ENST00000566682	TCP1	P17987	556 aa	Known RBP	13.63	□□□□□ -0.23
SPG7-215	ENST00000566682	TEAD1	P28347	426 aa		13.63	□□□□□ -0.23
SPG7-215	ENST00000566682	HMGCL	P35914	325 aa		13.63	□□□□□ -0.23
SPG7-215	ENST00000566682	GRK6	P43250	576 aa		13.63	□□□□□ -0.23
SPG7-215	ENST00000566682	KIAA1024L	P59773	190 aa		13.63	□□□□□ -0.23
SPG7-215	ENST00000566682	CDK3	Q00526	305 aa		13.63	□□□□□ -0.23
SPG7-215	ENST00000566682	PPARD	Q03181	441 aa		13.63	□□□□□ -0.23
SPG7-215	ENST00000566682	PPM1J	Q5JR12	505 aa		13.63	□□□□□ -0.23
SPG7-215	ENST00000566682	HENMT1	Q5T8I9	393 aa	Known RBP	13.63	□□□□□ -0.23
SPG7-215	ENST00000566682	DENND5A	Q6IQ26	1287 aa		13.63	□□□□□ -0.23
SPG7-215	ENST00000566682	PSAPL1	Q6NUJ1	521 aa		13.63	□□□□□ -0.23
SPG7-215	ENST00000566682	GSTA5	Q7RTV2	222 aa		13.63	□□□□□ -0.23
SPG7-215	ENST00000566682	RD3	Q7Z3Z2	195 aa		13.63	□□□□□ -0.23
SPG7-215	ENST00000566682	HID1	Q8IV36	788 aa		13.63	□□□□□ -0.23
SPG7-215	ENST00000566682	PHACTR4	Q8IZ21	702 aa		13.63	□□□□□ -0.23
SPG7-215	ENST00000566682	RBFA	Q8N0V3	343 aa		13.63	□□□□□ -0.23
SPG7-215	ENST00000566682	C17orf53	Q8N3J3	647 aa	Predicted RBP	13.63	□□□□□ -0.23
SPG7-215	ENST00000566682	TTC30B	Q8N4P2	665 aa		13.63	□□□□□ -0.23
SPG7-215	ENST00000566682	EID2	Q8N6I1	236 aa		13.63	□□□□□ -0.23
SPG7-215	ENST00000566682	OR56A4	Q8NGH8	313 aa		13.63	□□□□□ -0.23
SPG7-215	ENST00000566682	ATL2	Q8NHH9	583 aa		13.63	□□□□□ -0.23
SPG7-215	ENST00000566682	BTN2A2	Q8WVV5	523 aa		13.63	□□□□□ -0.23
SPG7-215	ENST00000566682	LRRC45	Q96CN5	670 aa		13.63	□□□□□ -0.23
SPG7-215	ENST00000566682	NAP1L3	Q99457	506 aa	Predicted RBP	13.63	□□□□□ -0.23
SPG7-215	ENST00000566682	AP1M1	Q9BXS5	423 aa		13.63	□□□□□ -0.23
SPG7-215	ENST00000566682	TCEAL2	Q9H3H9	227 aa	Predicted RBP	13.63	□□□□□ -0.23
SPG7-215	ENST00000566682	LRRC40	Q9H9A6	602 aa		13.63	□□□□□ -0.23
SPG7-215	ENST00000566682	ETNK1	Q9HBU6	452 aa		13.63	□□□□□ -0.23
SPG7-215	ENST00000566682	ARNT2	Q9HBZ2	717 aa		13.63	□□□□□ -0.23
SPG7-215	ENST00000566682	BPIFA1	Q9NP55	256 aa		13.63	□□□□□ -0.23
SPG7-215	ENST00000566682	PHPT1	Q9NRX4	125 aa	Predicted RBP	13.63	□□□□□ -0.23
SPG7-215	ENST00000566682	KL	Q9UEF7	1012 aa		13.63	□□□□□ -0.23
SPG7-215	ENST00000566682	DCHS1	Q96JQ0	3298 aa		13.63	□□□□□ -0.23
SPG7-215	ENST00000566682	PDE2A	O00408	941 aa	Predicted RBP	13.62	□□□□□ -0.23
SPG7-215	ENST00000566682	AP2A1	O95782	977 aa		13.62	□□□□□ -0.23
SPG7-215	ENST00000566682	ZSCAN5DP	P0CG00	497 aa		13.62	□□□□□ -0.23
SPG7-215	ENST00000566682	BPI	P17213	487 aa		13.62	□□□□□ -0.23
SPG7-215	ENST00000566682	KEL	P23276	732 aa		13.62	□□□□□ -0.23
SPG7-215	ENST00000566682	RPL22	P35268	128 aa	Known RBP	13.62	□□□□□ -0.23
SPG7-215	ENST00000566682	FDFT1	P37268	417 aa		13.62	□□□□□ -0.23
SPG7-215	ENST00000566682	BLK	P51451	505 aa		13.62	□□□□□ -0.23
SPG7-215	ENST00000566682	HK3	P52790	923 aa		13.62	□□□□□ -0.23
SPG7-215	ENST00000566682	SRP54	P61011	504 aa	Known RBP	13.62	□□□□□ -0.23

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