RNA–Protein interactions for RNA: ENST00000565121.1

NEIL1-209, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 2

Gene NEIL1, Length 1,169 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-209ENST00000565121 DTX1Q86Y01 620 aa13.24□□□□□ -0.29
NEIL1-209ENST00000565121 ZNF564Q8TBZ8 553 aaPredicted RBP13.24□□□□□ -0.29
NEIL1-209ENST00000565121 GPBAR1Q8TDU6 330 aa13.24□□□□□ -0.29
NEIL1-209ENST00000565121 ZDHHC1Q8WTX9 485 aa13.24□□□□□ -0.29
NEIL1-209ENST00000565121 PDCD6IPQ8WUM4 868 aaKnown RBP13.24□□□□□ -0.29
NEIL1-209ENST00000565121 NUS1Q96E22 293 aa13.24□□□□□ -0.29
NEIL1-209ENST00000565121 STARD5Q9NSY2 213 aa13.24□□□□□ -0.29
NEIL1-209ENST00000565121 SEPT10Q9P0V9 454 aa13.24□□□□□ -0.29
NEIL1-209ENST00000565121 TAAR2Q9P1P5 351 aa13.24□□□□□ -0.29
NEIL1-209ENST00000565121 CTTNBP2NLQ9P2B4 639 aa13.24□□□□□ -0.29
NEIL1-209ENST00000565121 SEPT3Q9UH03 358 aa13.24□□□□□ -0.29
NEIL1-209ENST00000565121 HEMK1Q9Y5R4 338 aaPredicted RBP13.24□□□□□ -0.29
NEIL1-209ENST00000565121 SDK2Q58EX2 2172 aa13.24□□□□□ -0.29
NEIL1-209ENST00000565121 ARHGAP6O43182 974 aa13.23□□□□□ -0.29
NEIL1-209ENST00000565121 MFAP3LO75121 409 aa13.23□□□□□ -0.29
NEIL1-209ENST00000565121 HEXIM1O94992 359 aaKnown RBP13.23□□□□□ -0.29
NEIL1-209ENST00000565121 H2AFZP0C0S5 128 aa13.23□□□□□ -0.29
NEIL1-209ENST00000565121 TMEM253P0C7T8 217 aa13.23□□□□□ -0.29
NEIL1-209ENST00000565121 MYCLP1P12525 358 aaPredicted RBP13.23□□□□□ -0.29
NEIL1-209ENST00000565121 MPSTP25325 297 aa13.23□□□□□ -0.29
NEIL1-209ENST00000565121 CD1CP29017 333 aa13.23□□□□□ -0.29
NEIL1-209ENST00000565121 ETV3P41162 512 aa13.23□□□□□ -0.29
NEIL1-209ENST00000565121 CDH6P55285 790 aa13.23□□□□□ -0.29
NEIL1-209ENST00000565121 MAXP61244 160 aa13.23□□□□□ -0.29
NEIL1-209ENST00000565121 TRIM14Q14142 442 aa13.23□□□□□ -0.29
NEIL1-209ENST00000565121 DPYSL3Q14195 570 aa13.23□□□□□ -0.29
NEIL1-209ENST00000565121 IHHQ14623 411 aa13.23□□□□□ -0.29
NEIL1-209ENST00000565121 CLCA4Q14CN2 919 aa13.23□□□□□ -0.29
NEIL1-209ENST00000565121 TMCO4Q5TGY1 634 aa13.23□□□□□ -0.29
NEIL1-209ENST00000565121 SLC30A9Q6PML9 568 aa13.23□□□□□ -0.29
NEIL1-209ENST00000565121 H2AFVQ71UI9 128 aa13.23□□□□□ -0.29
NEIL1-209ENST00000565121 SPOCK2Q92563 424 aa13.23□□□□□ -0.29
NEIL1-209ENST00000565121 TMEM159Q96B96 161 aa13.23□□□□□ -0.29
NEIL1-209ENST00000565121 SMIM14Q96QK8 99 aa13.23□□□□□ -0.29
NEIL1-209ENST00000565121 FRMD8Q9BZ67 464 aaPredicted RBP13.23□□□□□ -0.29
NEIL1-209ENST00000565121 NHEJ1Q9H9Q4 299 aaPredicted RBP13.23□□□□□ -0.29
NEIL1-209ENST00000565121 SPTLC3Q9NUV7 552 aa13.23□□□□□ -0.29
NEIL1-209ENST00000565121 RCOR3Q9P2K3 495 aaPredicted RBP13.23□□□□□ -0.29
NEIL1-209ENST00000565121 UVRAGQ9P2Y5 699 aa13.23□□□□□ -0.29
NEIL1-209ENST00000565121 SUFUQ9UMX1 484 aa13.23□□□□□ -0.29
NEIL1-209ENST00000565121 COL12A1Q99715 3063 aa13.23□□□□□ -0.29
NEIL1-209ENST00000565121 IGHV5-10-1A0A0J9YXX1 117 aa13.22□□□□□ -0.29
NEIL1-209ENST00000565121 GOLGA6CA6NDK9 693 aa13.22□□□□□ -0.29
NEIL1-209ENST00000565121 GOLGA6BA6NDN3 693 aa13.22□□□□□ -0.29
NEIL1-209ENST00000565121 RHPN2P1A8MT19 583 aa13.22□□□□□ -0.29
NEIL1-209ENST00000565121 PPM1DO15297 605 aa13.22□□□□□ -0.29
NEIL1-209ENST00000565121 HTRA2O43464 458 aaPredicted RBP13.22□□□□□ -0.29
NEIL1-209ENST00000565121 CPNE6O95741 557 aa13.22□□□□□ -0.29
NEIL1-209ENST00000565121 ITGB2P05107 769 aa13.22□□□□□ -0.29
NEIL1-209ENST00000565121 GOLGA6DP0CG33 693 aa13.22□□□□□ -0.29
NEIL1-209ENST00000565121 FGF3P11487 239 aaPredicted RBP13.22□□□□□ -0.29
NEIL1-209ENST00000565121 LHCGRP22888 699 aa13.22□□□□□ -0.29
NEIL1-209ENST00000565121 VIPR1P32241 457 aa13.22□□□□□ -0.29
NEIL1-209ENST00000565121 SSR1P43307 286 aaKnown RBP13.22□□□□□ -0.29
NEIL1-209ENST00000565121 AP1S1P61966 158 aa13.22□□□□□ -0.29
NEIL1-209ENST00000565121 CDK3Q00526 305 aa13.22□□□□□ -0.29
NEIL1-209ENST00000565121 CTBSQ01459 385 aa13.22□□□□□ -0.29
NEIL1-209ENST00000565121 TRAF2Q12933 501 aa13.22□□□□□ -0.29
NEIL1-209ENST00000565121 PAFAH1B3Q15102 231 aaKnown RBP13.22□□□□□ -0.29
NEIL1-209ENST00000565121 NCBP2-AS2Q69YL0 99 aa13.22□□□□□ -0.29
NEIL1-209ENST00000565121 DOK6Q6PKX4 331 aa13.22□□□□□ -0.29
NEIL1-209ENST00000565121 Q6ZVL8 140 aa13.22□□□□□ -0.29
NEIL1-209ENST00000565121 ZNF438Q7Z4V0 828 aa13.22□□□□□ -0.29
NEIL1-209ENST00000565121 TSPAN33Q86UF1 283 aa13.22□□□□□ -0.29
NEIL1-209ENST00000565121 NAGSQ8N159 534 aa13.22□□□□□ -0.29
NEIL1-209ENST00000565121 CBARPQ8N350 705 aaPredicted RBP13.22□□□□□ -0.29
NEIL1-209ENST00000565121 TEX26Q8N6G2 289 aa13.22□□□□□ -0.29
NEIL1-209ENST00000565121 PQLC3Q8N755 202 aa13.22□□□□□ -0.29
NEIL1-209ENST00000565121 SLC35G2Q8TBE7 412 aa13.22□□□□□ -0.29
NEIL1-209ENST00000565121 KIAA1524Q8TCG1 905 aa13.22□□□□□ -0.29
NEIL1-209ENST00000565121 CTNNBL1Q8WYA6 563 aaPredicted RBP13.22□□□□□ -0.29
NEIL1-209ENST00000565121 RAPGEF5Q92565 580 aa13.22□□□□□ -0.29
NEIL1-209ENST00000565121 FAF2Q96CS3 445 aa13.22□□□□□ -0.29
NEIL1-209ENST00000565121 DTD2Q96FN9 168 aa13.22□□□□□ -0.29
NEIL1-209ENST00000565121 CCDC74BQ96LY2 380 aa13.22□□□□□ -0.29
NEIL1-209ENST00000565121 MGME1Q9BQP7 344 aa13.22□□□□□ -0.29
NEIL1-209ENST00000565121 TEX101Q9BY14 249 aa13.22□□□□□ -0.29
NEIL1-209ENST00000565121 GSDMCQ9BYG8 508 aa13.22□□□□□ -0.29
NEIL1-209ENST00000565121 NOD2Q9HC29 1040 aa13.22□□□□□ -0.29
NEIL1-209ENST00000565121 PHPT1Q9NRX4 125 aaPredicted RBP13.22□□□□□ -0.29
NEIL1-209ENST00000565121 GOLGA6AQ9NYA3 693 aa13.22□□□□□ -0.29
NEIL1-209ENST00000565121 TMEM9Q9P0T7 183 aa13.22□□□□□ -0.29
NEIL1-209ENST00000565121 IL17BQ9UHF5 180 aa13.22□□□□□ -0.29
NEIL1-209ENST00000565121 PCDHB11Q9Y5F2 797 aa13.22□□□□□ -0.29
NEIL1-209ENST00000565121 HECTD1Q9ULT8 2610 aa13.22□□□□□ -0.29
NEIL1-209ENST00000565121 TRBV23OR9-2A0A075B6M9 112 aa13.21□□□□□ -0.29
NEIL1-209ENST00000565121 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.21□□□□□ -0.29
NEIL1-209ENST00000565121 NPIPB15A6NHN6 443 aaPredicted RBP13.21□□□□□ -0.29
NEIL1-209ENST00000565121 PDE2AO00408 941 aaPredicted RBP13.21□□□□□ -0.29
NEIL1-209ENST00000565121 TERTO14746 1132 aaKnown RBP13.21□□□□□ -0.29
NEIL1-209ENST00000565121 AKR1B10O60218 316 aa13.21□□□□□ -0.29
NEIL1-209ENST00000565121 MTA2O94776 668 aa13.21□□□□□ -0.29
NEIL1-209ENST00000565121 CPP00450 1065 aa13.21□□□□□ -0.29
NEIL1-209ENST00000565121 CTPS1P17812 591 aa13.21□□□□□ -0.29
NEIL1-209ENST00000565121 MAN1A1P33908 653 aa13.21□□□□□ -0.29
NEIL1-209ENST00000565121 CSRP3P50461 194 aa13.21□□□□□ -0.29
NEIL1-209ENST00000565121 RENBPP51606 427 aa13.21□□□□□ -0.29
NEIL1-209ENST00000565121 ILF3Q12906 894 aaKnown RBP eCLIP13.21□□□□□ -0.29
NEIL1-209ENST00000565121 SLC10A2Q12908 348 aaPredicted RBP13.21□□□□□ -0.29
NEIL1-209ENST00000565121 KRT81Q14533 505 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms