RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 ZBTB6Q15916 424 aa14.02□□□□□ -0.17
GTF3C1-203ENST00000562609 SPPL2CQ8IUH8 684 aa14.02□□□□□ -0.17
GTF3C1-203ENST00000562609 DHX35Q9H5Z1 703 aaKnown RBP14.02□□□□□ -0.17
GTF3C1-203ENST00000562609 AASDHPPTQ9NRN7 309 aa14.02□□□□□ -0.17
GTF3C1-203ENST00000562609 DDX28Q9NUL7 540 aaKnown RBP14.02□□□□□ -0.17
GTF3C1-203ENST00000562609 GIMAP4Q9NUV9 329 aa14.02□□□□□ -0.17
GTF3C1-203ENST00000562609 ARIH1Q9Y4X5 557 aaPredicted RBP14.02□□□□□ -0.17
GTF3C1-203ENST00000562609 M0R3G1 203 aa14.01□□□□□ -0.17
GTF3C1-203ENST00000562609 TRUB2O95900 331 aaKnown RBP14.01□□□□□ -0.17
GTF3C1-203ENST00000562609 PGK1P00558 417 aa14.01□□□□□ -0.17
GTF3C1-203ENST00000562609 F7P08709 466 aaPredicted RBP14.01□□□□□ -0.17
GTF3C1-203ENST00000562609 NAT2P11245 290 aa14.01□□□□□ -0.17
GTF3C1-203ENST00000562609 SLC7A2P52569 658 aa14.01□□□□□ -0.17
GTF3C1-203ENST00000562609 CTF1Q16619 201 aa14.01□□□□□ -0.17
GTF3C1-203ENST00000562609 FKBP9P1Q75LS8 142 aa14.01□□□□□ -0.17
GTF3C1-203ENST00000562609 SPRED1Q7Z699 444 aa14.01□□□□□ -0.17
GTF3C1-203ENST00000562609 RASAL3Q86YV0 1011 aa14.01□□□□□ -0.17
GTF3C1-203ENST00000562609 SPARTQ8N0X7 666 aa14.01□□□□□ -0.17
GTF3C1-203ENST00000562609 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.01□□□□□ -0.17
GTF3C1-203ENST00000562609 PQLC3Q8N755 202 aa14.01□□□□□ -0.17
GTF3C1-203ENST00000562609 POC5Q8NA72 575 aa14.01□□□□□ -0.17
GTF3C1-203ENST00000562609 BEST2Q8NFU1 509 aa14.01□□□□□ -0.17
GTF3C1-203ENST00000562609 DACH2Q96NX9 599 aa14.01□□□□□ -0.17
GTF3C1-203ENST00000562609 DHRS9Q9BPW9 319 aa14.01□□□□□ -0.17
GTF3C1-203ENST00000562609 RETREG1Q9H6L5 497 aa14.01□□□□□ -0.17
GTF3C1-203ENST00000562609 PLEKHA5Q9HAU0 1116 aa14.01□□□□□ -0.17
GTF3C1-203ENST00000562609 SPC25Q9HBM1 224 aa14.01□□□□□ -0.17
GTF3C1-203ENST00000562609 MTMR10Q9NXD2 777 aa14.01□□□□□ -0.17
GTF3C1-203ENST00000562609 SPEF1Q9Y4P9 236 aa14.01□□□□□ -0.17
GTF3C1-203ENST00000562609 C2CD4BA6NLJ0 364 aa14.01□□□□□ -0.17
GTF3C1-203ENST00000562609 F5H423 210 aaPredicted RBP14.01□□□□□ -0.17
GTF3C1-203ENST00000562609 AXIN1O15169 862 aa14.01□□□□□ -0.17
GTF3C1-203ENST00000562609 GPC4O75487 556 aa14.01□□□□□ -0.17
GTF3C1-203ENST00000562609 LCP1P13796 627 aa14.01□□□□□ -0.17
GTF3C1-203ENST00000562609 MAGP20916 626 aa14.01□□□□□ -0.17
GTF3C1-203ENST00000562609 GPD1P21695 349 aa14.01□□□□□ -0.17
GTF3C1-203ENST00000562609 ALDH4A1P30038 563 aa14.01□□□□□ -0.17
GTF3C1-203ENST00000562609 GRIA4P48058 902 aa14.01□□□□□ -0.17
GTF3C1-203ENST00000562609 ARCN1P48444 511 aaKnown RBP14.01□□□□□ -0.17
GTF3C1-203ENST00000562609 PPP2R2BQ00005 443 aa14.01□□□□□ -0.17
GTF3C1-203ENST00000562609 IRF9Q00978 393 aa14.01□□□□□ -0.17
GTF3C1-203ENST00000562609 GALK2Q01415 458 aa14.01□□□□□ -0.17
GTF3C1-203ENST00000562609 KYAT1Q16773 422 aa14.01□□□□□ -0.17
GTF3C1-203ENST00000562609 TMEM236Q5W0B7 351 aa14.01□□□□□ -0.17
GTF3C1-203ENST00000562609 TWF2Q6IBS0 349 aaKnown RBP14.01□□□□□ -0.17
GTF3C1-203ENST00000562609 CXCL17Q6UXB2 119 aa14.01□□□□□ -0.17
GTF3C1-203ENST00000562609 USP51Q70EK9 711 aa14.01□□□□□ -0.17
GTF3C1-203ENST00000562609 ADCK1Q86TW2 530 aa14.01□□□□□ -0.17
GTF3C1-203ENST00000562609 LSMEM1Q8N8F7 131 aa14.01□□□□□ -0.17
GTF3C1-203ENST00000562609 CHID1Q9BWS9 393 aa14.01□□□□□ -0.17
GTF3C1-203ENST00000562609 ARHGAP39Q9C0H5 1083 aa14.01□□□□□ -0.17
GTF3C1-203ENST00000562609 CLPBQ9H078 707 aa14.01□□□□□ -0.17
GTF3C1-203ENST00000562609 AP5M1Q9H0R1 490 aa14.01□□□□□ -0.17
GTF3C1-203ENST00000562609 CCDC177Q9NQR7 707 aaPredicted RBP14.01□□□□□ -0.17
GTF3C1-203ENST00000562609 FBXO8Q9NRD0 319 aa14.01□□□□□ -0.17
GTF3C1-203ENST00000562609 CCDC167Q9P0B6 97 aa14.01□□□□□ -0.17
GTF3C1-203ENST00000562609 BAG5Q9UL15 447 aa14.01□□□□□ -0.17
GTF3C1-203ENST00000562609 VWA7Q9Y334 891 aa14.01□□□□□ -0.17
GTF3C1-203ENST00000562609 BOLA1Q9Y3E2 137 aa14.01□□□□□ -0.17
GTF3C1-203ENST00000562609 TANC1Q9C0D5 1861 aa14.01□□□□□ -0.17
GTF3C1-203ENST00000562609 RNF103O00237 685 aa14□□□□□ -0.17
GTF3C1-203ENST00000562609 AREL1O15033 823 aa14□□□□□ -0.17
GTF3C1-203ENST00000562609 KRT6AP02538 564 aa14□□□□□ -0.17
GTF3C1-203ENST00000562609 KRT6BP04259 564 aa14□□□□□ -0.17
GTF3C1-203ENST00000562609 C7P10643 843 aa14□□□□□ -0.17
GTF3C1-203ENST00000562609 SPNP16150 400 aa14□□□□□ -0.17
GTF3C1-203ENST00000562609 GSTM2P28161 218 aa14□□□□□ -0.17
GTF3C1-203ENST00000562609 MAGEA6P43360 314 aa14□□□□□ -0.17
GTF3C1-203ENST00000562609 ZNF143P52747 638 aaPredicted RBP14□□□□□ -0.17
GTF3C1-203ENST00000562609 LSM3P62310 102 aaKnown RBP14□□□□□ -0.17
GTF3C1-203ENST00000562609 PIGFQ07326 219 aa14□□□□□ -0.17
GTF3C1-203ENST00000562609 CRY1Q16526 586 aa14□□□□□ -0.17
GTF3C1-203ENST00000562609 PCSK7Q16549 785 aa14□□□□□ -0.17
GTF3C1-203ENST00000562609 FSCN1Q16658 493 aaKnown RBP14□□□□□ -0.17
GTF3C1-203ENST00000562609 CA9Q16790 459 aa14□□□□□ -0.17
GTF3C1-203ENST00000562609 ZIK1Q3SY52 487 aaPredicted RBP14□□□□□ -0.17
GTF3C1-203ENST00000562609 CCDC14Q49A88 953 aa14□□□□□ -0.17
GTF3C1-203ENST00000562609 FBXO47Q5MNV8 452 aa14□□□□□ -0.17
GTF3C1-203ENST00000562609 CATSPEREQ5SY80 951 aa14□□□□□ -0.17
GTF3C1-203ENST00000562609 R3HCC1LQ7Z5L2 792 aaKnown RBP14□□□□□ -0.17
GTF3C1-203ENST00000562609 CCDC103Q8IW40 242 aa14□□□□□ -0.17
GTF3C1-203ENST00000562609 DCLK2Q8N568 766 aa14□□□□□ -0.17
GTF3C1-203ENST00000562609 OR7A2PQ8NGA2 310 aa14□□□□□ -0.17
GTF3C1-203ENST00000562609 OR6Q1Q8NGQ2 317 aa14□□□□□ -0.17
GTF3C1-203ENST00000562609 ANGPTL6Q8NI99 470 aa14□□□□□ -0.17
GTF3C1-203ENST00000562609 ATL1Q8WXF7 558 aa14□□□□□ -0.17
GTF3C1-203ENST00000562609 HDAC10Q969S8 669 aa14□□□□□ -0.17
GTF3C1-203ENST00000562609 EPS8L2Q9H6S3 715 aa14□□□□□ -0.17
GTF3C1-203ENST00000562609 TRIM39Q9HCM9 518 aa14□□□□□ -0.17
GTF3C1-203ENST00000562609 TBC1D13Q9NVG8 400 aa14□□□□□ -0.17
GTF3C1-203ENST00000562609 EIF3LQ9Y262 564 aaKnown RBP14□□□□□ -0.17
GTF3C1-203ENST00000562609 ZBBXA8MT70 800 aa14□□□□□ -0.17
GTF3C1-203ENST00000562609 TMEM233B4DJY2 109 aa14□□□□□ -0.17
GTF3C1-203ENST00000562609 DAB1O75553 588 aa14□□□□□ -0.17
GTF3C1-203ENST00000562609 ALDH1A2O94788 518 aa14□□□□□ -0.17
GTF3C1-203ENST00000562609 PSMA4P25789 261 aaKnown RBP14□□□□□ -0.17
GTF3C1-203ENST00000562609 ALDH7A1P49419 539 aaKnown RBP14□□□□□ -0.17
GTF3C1-203ENST00000562609 PRKAA1Q13131 559 aa14□□□□□ -0.17
GTF3C1-203ENST00000562609 HIST2H2ACQ16777 129 aaPredicted RBP14□□□□□ -0.17
GTF3C1-203ENST00000562609 ANO4Q32M45 955 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms