RNA–Protein interactions for RNA: ENST00000561348.1

HERC1-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-212ENST00000561348 ZNF711Q9Y462 761 aa10.1□□□□□ -0.79
HERC1-212ENST00000561348 GPSM3Q9Y4H4 160 aa10.1□□□□□ -0.79
HERC1-212ENST00000561348 FAM149AA5PLN7 773 aa10.09□□□□□ -0.79
HERC1-212ENST00000561348 PSMD11O00231 422 aa10.09□□□□□ -0.79
HERC1-212ENST00000561348 PDE2AO00408 941 aaPredicted RBP10.09□□□□□ -0.79
HERC1-212ENST00000561348 AURKAO14965 403 aa10.09□□□□□ -0.79
HERC1-212ENST00000561348 ZSCAN12O43309 604 aa10.09□□□□□ -0.79
HERC1-212ENST00000561348 USP12O75317 370 aa10.09□□□□□ -0.79
HERC1-212ENST00000561348 GCATO75600 419 aa10.09□□□□□ -0.79
HERC1-212ENST00000561348 ANXA9O76027 345 aa10.09□□□□□ -0.79
HERC1-212ENST00000561348 ATP1A1P05023 1023 aaKnown RBP10.09□□□□□ -0.79
HERC1-212ENST00000561348 TSHRP16473 764 aa10.09□□□□□ -0.79
HERC1-212ENST00000561348 ACTN2P35609 894 aa10.09□□□□□ -0.79
HERC1-212ENST00000561348 HK3P52790 923 aa10.09□□□□□ -0.79
HERC1-212ENST00000561348 STC1P52823 247 aa10.09□□□□□ -0.79
HERC1-212ENST00000561348 CLDN6P56747 220 aa10.09□□□□□ -0.79
HERC1-212ENST00000561348 MPP3Q13368 585 aa10.09□□□□□ -0.79
HERC1-212ENST00000561348 BIRC2Q13490 618 aa10.09□□□□□ -0.79
HERC1-212ENST00000561348 CDKN3Q16667 212 aa10.09□□□□□ -0.79
HERC1-212ENST00000561348 KCTD19Q17RG1 926 aaPredicted RBP10.09□□□□□ -0.79
HERC1-212ENST00000561348 LONRF2Q1L5Z9 754 aa10.09□□□□□ -0.79
HERC1-212ENST00000561348 SIRPB2Q5JXA9 342 aa10.09□□□□□ -0.79
HERC1-212ENST00000561348 KCTD16Q68DU8 428 aa10.09□□□□□ -0.79
HERC1-212ENST00000561348 ESRP1Q6NXG1 681 aaKnown RBP10.09□□□□□ -0.79
HERC1-212ENST00000561348 GSTA5Q7RTV2 222 aa10.09□□□□□ -0.79
HERC1-212ENST00000561348 MARCH9Q86YJ5 346 aa10.09□□□□□ -0.79
HERC1-212ENST00000561348 SLC13A5Q86YT5 568 aaPredicted RBP10.09□□□□□ -0.79
HERC1-212ENST00000561348 GDAP1Q8TB36 358 aa10.09□□□□□ -0.79
HERC1-212ENST00000561348 SCG3Q8WXD2 468 aaKnown RBP10.09□□□□□ -0.79
HERC1-212ENST00000561348 OR1E3Q8WZA6 343 aa10.09□□□□□ -0.79
HERC1-212ENST00000561348 LRRC45Q96CN5 670 aa10.09□□□□□ -0.79
HERC1-212ENST00000561348 MRGPRX2Q96LB1 330 aa10.09□□□□□ -0.79
HERC1-212ENST00000561348 FCRL5Q96RD9 977 aa10.09□□□□□ -0.79
HERC1-212ENST00000561348 LRRC61Q9BV99 259 aa10.09□□□□□ -0.79
HERC1-212ENST00000561348 SCNM1Q9BWG6 230 aa10.09□□□□□ -0.79
HERC1-212ENST00000561348 GBA3Q9H227 469 aa10.09□□□□□ -0.79
HERC1-212ENST00000561348 FGF22Q9HCT0 170 aa10.09□□□□□ -0.79
HERC1-212ENST00000561348 ANGPTL2Q9UKU9 493 aa10.09□□□□□ -0.79
HERC1-212ENST00000561348 PNMA8BQ9ULN7 279 aaPredicted RBP10.09□□□□□ -0.79
HERC1-212ENST00000561348 PPIL1Q9Y3C6 166 aa10.09□□□□□ -0.79
HERC1-212ENST00000561348 SPO11Q9Y5K1 396 aa10.09□□□□□ -0.79
HERC1-212ENST00000561348 DCHS1Q96JQ0 3298 aa10.09□□□□□ -0.79
HERC1-212ENST00000561348 PRSS38A1L453 326 aa10.08□□□□□ -0.8
HERC1-212ENST00000561348 B4DGG1 531 aa10.08□□□□□ -0.8
HERC1-212ENST00000561348 E7EVH7 732 aa10.08□□□□□ -0.8
HERC1-212ENST00000561348 YY2O15391 372 aa10.08□□□□□ -0.8
HERC1-212ENST00000561348 FGGP02679 453 aa10.08□□□□□ -0.8
HERC1-212ENST00000561348 MYCLP1P12525 358 aaPredicted RBP10.08□□□□□ -0.8
HERC1-212ENST00000561348 SPINT3P49223 89 aa10.08□□□□□ -0.8
HERC1-212ENST00000561348 GDF10P55107 478 aa10.08□□□□□ -0.8
HERC1-212ENST00000561348 CDK3Q00526 305 aa10.08□□□□□ -0.8
HERC1-212ENST00000561348 FOXK2Q01167 660 aa10.08□□□□□ -0.8
HERC1-212ENST00000561348 ELOCQ15369 112 aa10.08□□□□□ -0.8
HERC1-212ENST00000561348 ZNF648Q5T619 568 aaPredicted RBP10.08□□□□□ -0.8
HERC1-212ENST00000561348 KDELC1Q6UW63 502 aa10.08□□□□□ -0.8
HERC1-212ENST00000561348 DBX2Q6ZNG2 339 aa10.08□□□□□ -0.8
HERC1-212ENST00000561348 GLT6D1Q7Z4J2 308 aa10.08□□□□□ -0.8
HERC1-212ENST00000561348 TECPR1Q7Z6L1 1165 aa10.08□□□□□ -0.8
HERC1-212ENST00000561348 PRUNE1Q86TP1 453 aa10.08□□□□□ -0.8
HERC1-212ENST00000561348 CCDC89Q8N998 374 aa10.08□□□□□ -0.8
HERC1-212ENST00000561348 FAM46DQ8NEK8 389 aa10.08□□□□□ -0.8
HERC1-212ENST00000561348 OR4C6Q8NH72 309 aa10.08□□□□□ -0.8
HERC1-212ENST00000561348 HIC2Q96JB3 615 aa10.08□□□□□ -0.8
HERC1-212ENST00000561348 APOLD1Q96LR9 279 aa10.08□□□□□ -0.8
HERC1-212ENST00000561348 SPATA13Q96N96 652 aa10.08□□□□□ -0.8
HERC1-212ENST00000561348 TRIB3Q96RU7 358 aa10.08□□□□□ -0.8
HERC1-212ENST00000561348 CLPBQ9H078 707 aa10.08□□□□□ -0.8
HERC1-212ENST00000561348 TMEM168Q9H0V1 697 aa10.08□□□□□ -0.8
HERC1-212ENST00000561348 ABCG4Q9H172 646 aa10.08□□□□□ -0.8
HERC1-212ENST00000561348 KCNF1Q9H3M0 494 aa10.08□□□□□ -0.8
HERC1-212ENST00000561348 DPEP2Q9H4A9 486 aa10.08□□□□□ -0.8
HERC1-212ENST00000561348 MAGEE1Q9HCI5 957 aa10.08□□□□□ -0.8
HERC1-212ENST00000561348 PIH1D1Q9NWS0 290 aaKnown RBP10.08□□□□□ -0.8
HERC1-212ENST00000561348 KCTD5Q9NXV2 234 aa10.08□□□□□ -0.8
HERC1-212ENST00000561348 ZNHIT2Q9UHR6 403 aa10.08□□□□□ -0.8
HERC1-212ENST00000561348 KLK13Q9UKR3 277 aa10.08□□□□□ -0.8
HERC1-212ENST00000561348 GPR34Q9UPC5 381 aa10.08□□□□□ -0.8
HERC1-212ENST00000561348 AAR2Q9Y312 384 aaKnown RBP10.08□□□□□ -0.8
HERC1-212ENST00000561348 PRKAB1Q9Y478 270 aa10.08□□□□□ -0.8
HERC1-212ENST00000561348 TRBV23OR9-2A0A075B6M9 112 aa10.07□□□□□ -0.8
HERC1-212ENST00000561348 CCDC78A2IDD5 438 aa10.07□□□□□ -0.8
HERC1-212ENST00000561348 AGRPO00253 132 aa10.07□□□□□ -0.8
HERC1-212ENST00000561348 TOR1BO14657 336 aa10.07□□□□□ -0.8
HERC1-212ENST00000561348 KIF5CO60282 957 aa10.07□□□□□ -0.8
HERC1-212ENST00000561348 RFPL3O75679 317 aa10.07□□□□□ -0.8
HERC1-212ENST00000561348 SLC25A14O95258 325 aaPredicted RBP10.07□□□□□ -0.8
HERC1-212ENST00000561348 ETS1P14921 441 aa10.07□□□□□ -0.8
HERC1-212ENST00000561348 JUPP14923 745 aa10.07□□□□□ -0.8
HERC1-212ENST00000561348 CKMT2P17540 419 aa10.07□□□□□ -0.8
HERC1-212ENST00000561348 TPH1P17752 444 aa10.07□□□□□ -0.8
HERC1-212ENST00000561348 KIAA1024LP59773 190 aa10.07□□□□□ -0.8
HERC1-212ENST00000561348 TMPRSS15P98073 1019 aa10.07□□□□□ -0.8
HERC1-212ENST00000561348 KLF1Q13351 362 aaPredicted RBP10.07□□□□□ -0.8
HERC1-212ENST00000561348 SEPT6Q14141 434 aa10.07□□□□□ -0.8
HERC1-212ENST00000561348 PTPRCAPQ14761 206 aa10.07□□□□□ -0.8
HERC1-212ENST00000561348 AGERQ15109 404 aa10.07□□□□□ -0.8
HERC1-212ENST00000561348 SLC1A5Q15758 541 aa10.07□□□□□ -0.8
HERC1-212ENST00000561348 SLC30A9Q6PML9 568 aa10.07□□□□□ -0.8
HERC1-212ENST00000561348 KANSL1Q7Z3B3 1105 aa10.07□□□□□ -0.8
HERC1-212ENST00000561348 GKN2Q86XP6 184 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms