RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 PRG2P13727 222 aa13.44□□□□□ -0.26
TRAF3-208ENST00000560371 HNRNPH1P31943 449 aaKnown RBP13.44□□□□□ -0.26
TRAF3-208ENST00000560371 GRIA3P42263 894 aa13.44□□□□□ -0.26
TRAF3-208ENST00000560371 NDUFA9Q16795 377 aa13.44□□□□□ -0.26
TRAF3-208ENST00000560371 DENND6AQ8IWF6 608 aa13.44□□□□□ -0.26
TRAF3-208ENST00000560371 ULK2Q8IYT8 1036 aa13.44□□□□□ -0.26
TRAF3-208ENST00000560371 TCAIMQ8N3R3 496 aa13.44□□□□□ -0.26
TRAF3-208ENST00000560371 PPCDCQ96CD2 204 aa13.44□□□□□ -0.26
TRAF3-208ENST00000560371 C12orf42Q96LP6 360 aa13.44□□□□□ -0.26
TRAF3-208ENST00000560371 SLC38A2Q96QD8 506 aa13.44□□□□□ -0.26
TRAF3-208ENST00000560371 GRIP2Q9C0E4 1043 aa13.44□□□□□ -0.26
TRAF3-208ENST00000560371 SORCS3Q9UPU3 1222 aa13.44□□□□□ -0.26
TRAF3-208ENST00000560371 RHPN2P1A8MT19 583 aa13.44□□□□□ -0.26
TRAF3-208ENST00000560371 SLC28A2O43868 658 aa13.44□□□□□ -0.26
TRAF3-208ENST00000560371 PDE9AO76083 593 aa13.44□□□□□ -0.26
TRAF3-208ENST00000560371 ABHD2P08910 425 aa13.44□□□□□ -0.26
TRAF3-208ENST00000560371 FAM58BPP0C7Q3 252 aa13.44□□□□□ -0.26
TRAF3-208ENST00000560371 SLC10A6Q3KNW5 377 aa13.44□□□□□ -0.26
TRAF3-208ENST00000560371 C9orf64Q5T6V5 341 aa13.44□□□□□ -0.26
TRAF3-208ENST00000560371 ZNF618Q5T7W0 954 aa13.44□□□□□ -0.26
TRAF3-208ENST00000560371 PRSS55Q6UWB4 352 aaPredicted RBP13.44□□□□□ -0.26
TRAF3-208ENST00000560371 VITQ6UXI7 678 aa13.44□□□□□ -0.26
TRAF3-208ENST00000560371 SLC26A9Q7LBE3 791 aa13.44□□□□□ -0.26
TRAF3-208ENST00000560371 FAM83DQ9H4H8 585 aa13.44□□□□□ -0.26
TRAF3-208ENST00000560371 EXD2Q9NVH0 621 aa13.44□□□□□ -0.26
TRAF3-208ENST00000560371 RAP2CQ9Y3L5 183 aa13.44□□□□□ -0.26
TRAF3-208ENST00000560371 SIGLEC1Q9BZZ2 1709 aa13.44□□□□□ -0.26
TRAF3-208ENST00000560371 HDAC3O15379 428 aa13.44□□□□□ -0.26
TRAF3-208ENST00000560371 ALPPL2P10696 532 aa13.44□□□□□ -0.26
TRAF3-208ENST00000560371 RANBP1P43487 201 aa13.44□□□□□ -0.26
TRAF3-208ENST00000560371 MRPS22P82650 360 aaKnown RBP13.44□□□□□ -0.26
TRAF3-208ENST00000560371 C19orf60Q96EN9 201 aa13.44□□□□□ -0.26
TRAF3-208ENST00000560371 RPL10LQ96L21 214 aaKnown RBP13.44□□□□□ -0.26
TRAF3-208ENST00000560371 CLDND1Q9NY35 253 aa13.44□□□□□ -0.26
TRAF3-208ENST00000560371 MTF2Q9Y483 593 aaPredicted RBP13.44□□□□□ -0.26
TRAF3-208ENST00000560371 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.44□□□□□ -0.26
TRAF3-208ENST00000560371 AZIN1O14977 448 aa13.44□□□□□ -0.26
TRAF3-208ENST00000560371 AOC2O75106 756 aa13.44□□□□□ -0.26
TRAF3-208ENST00000560371 IDO1P14902 403 aa13.44□□□□□ -0.26
TRAF3-208ENST00000560371 ARMC8Q8IUR7 673 aa13.44□□□□□ -0.26
TRAF3-208ENST00000560371 CACTIN-AS1Q8N1I8 211 aa13.44□□□□□ -0.26
TRAF3-208ENST00000560371 ITCHQ96J02 903 aa13.44□□□□□ -0.26
TRAF3-208ENST00000560371 RBPJLQ9UBG7 517 aa13.44□□□□□ -0.26
TRAF3-208ENST00000560371 SHBGP04278 402 aa13.44□□□□□ -0.26
TRAF3-208ENST00000560371 MAT2AP31153 395 aaKnown RBP13.44□□□□□ -0.26
TRAF3-208ENST00000560371 C4orf32Q8N8J7 132 aa13.44□□□□□ -0.26
TRAF3-208ENST00000560371 GPR88Q9GZN0 384 aa13.44□□□□□ -0.26
TRAF3-208ENST00000560371 SPAG4Q9NPE6 437 aa13.44□□□□□ -0.26
TRAF3-208ENST00000560371 DIABLOQ9NR28 239 aa13.44□□□□□ -0.26
TRAF3-208ENST00000560371 MCIDASD6RGH6 385 aa13.43□□□□□ -0.26
TRAF3-208ENST00000560371 CBX6O95503 412 aa13.43□□□□□ -0.26
TRAF3-208ENST00000560371 RAB14P61106 215 aa13.43□□□□□ -0.26
TRAF3-208ENST00000560371 MINDY4Q4G0A6 757 aa13.43□□□□□ -0.26
TRAF3-208ENST00000560371 ANXA8L1Q5VT79 327 aa13.43□□□□□ -0.26
TRAF3-208ENST00000560371 TRIQKQ629K1 86 aa13.43□□□□□ -0.26
TRAF3-208ENST00000560371 PLEKHA7Q6IQ23 1121 aa13.43□□□□□ -0.26
TRAF3-208ENST00000560371 BRI3BPQ8WY22 251 aa13.43□□□□□ -0.26
TRAF3-208ENST00000560371 SEMA3GQ9NS98 782 aa13.43□□□□□ -0.26
TRAF3-208ENST00000560371 SLC38A8A6NNN8 435 aa13.43□□□□□ -0.26
TRAF3-208ENST00000560371 SCN2BO60939 215 aa13.43□□□□□ -0.26
TRAF3-208ENST00000560371 PKMP14618 531 aaKnown RBP13.43□□□□□ -0.26
TRAF3-208ENST00000560371 CCR3P51677 355 aa13.43□□□□□ -0.26
TRAF3-208ENST00000560371 OTOP3Q7RTS5 596 aa13.43□□□□□ -0.26
TRAF3-208ENST00000560371 OR7D4Q8NG98 312 aa13.43□□□□□ -0.26
TRAF3-208ENST00000560371 ZNF671Q8TAW3 534 aa13.43□□□□□ -0.26
TRAF3-208ENST00000560371 FNIP1Q8TF40 1166 aa13.43□□□□□ -0.26
TRAF3-208ENST00000560371 SH3GL3Q99963 347 aa13.43□□□□□ -0.26
TRAF3-208ENST00000560371 C1orf50Q9BV19 199 aa13.43□□□□□ -0.26
TRAF3-208ENST00000560371 CNPPD1Q9BV87 410 aa13.43□□□□□ -0.26
TRAF3-208ENST00000560371 FAM208AQ9UK61 1670 aaKnown RBP13.43□□□□□ -0.26
TRAF3-208ENST00000560371 LRIG2O94898 1065 aa13.43□□□□□ -0.26
TRAF3-208ENST00000560371 CCL5P13501 91 aa13.43□□□□□ -0.26
TRAF3-208ENST00000560371 L1CAMP32004 1257 aa13.43□□□□□ -0.26
TRAF3-208ENST00000560371 GBE1Q04446 702 aa13.43□□□□□ -0.26
TRAF3-208ENST00000560371 COX10Q12887 443 aa13.43□□□□□ -0.26
TRAF3-208ENST00000560371 C2orf27AQ580R0 203 aa13.43□□□□□ -0.26
TRAF3-208ENST00000560371 SLC25A24Q6NUK1 477 aa13.43□□□□□ -0.26
TRAF3-208ENST00000560371 BHLHE22Q8NFJ8 381 aaPredicted RBP13.43□□□□□ -0.26
TRAF3-208ENST00000560371 PTCD2Q8WV60 388 aaKnown RBP13.43□□□□□ -0.26
TRAF3-208ENST00000560371 HNRNPABQ99729 332 aaKnown RBP13.43□□□□□ -0.26
TRAF3-208ENST00000560371 SH3GL2Q99962 352 aa13.43□□□□□ -0.26
TRAF3-208ENST00000560371 PCDHGC3Q9UN70 934 aa13.43□□□□□ -0.26
TRAF3-208ENST00000560371 GSTK1Q9Y2Q3 226 aa13.43□□□□□ -0.26
TRAF3-208ENST00000560371 INSIG1O15503 277 aa13.43□□□□□ -0.26
TRAF3-208ENST00000560371 PRAMEF1O95521 474 aa13.43□□□□□ -0.26
TRAF3-208ENST00000560371 SYN1P17600 705 aa13.43□□□□□ -0.26
TRAF3-208ENST00000560371 CDH13P55290 713 aa13.43□□□□□ -0.26
TRAF3-208ENST00000560371 NDUFAF6Q330K2 333 aa13.43□□□□□ -0.26
TRAF3-208ENST00000560371 SRFBP1Q8NEF9 429 aaKnown RBP13.43□□□□□ -0.26
TRAF3-208ENST00000560371 ZNF563Q8TA94 476 aa13.43□□□□□ -0.26
TRAF3-208ENST00000560371 GDPD5Q8WTR4 605 aa13.43□□□□□ -0.26
TRAF3-208ENST00000560371 GBA3Q9H227 469 aa13.43□□□□□ -0.26
TRAF3-208ENST00000560371 ACSS3Q9H6R3 686 aa13.43□□□□□ -0.26
TRAF3-208ENST00000560371 MYH4Q9Y623 1939 aa13.43□□□□□ -0.26
TRAF3-208ENST00000560371 SPEF2Q9C093 1822 aa13.43□□□□□ -0.26
TRAF3-208ENST00000560371 TRIM43BA6NCK2 446 aa13.43□□□□□ -0.26
TRAF3-208ENST00000560371 LRCH4O75427 683 aa13.43□□□□□ -0.26
TRAF3-208ENST00000560371 CDH3P22223 829 aa13.43□□□□□ -0.26
TRAF3-208ENST00000560371 FGFR3P22607 806 aa13.43□□□□□ -0.26
TRAF3-208ENST00000560371 GSTM5P46439 218 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms