RNA–Protein interactions for RNA: ENST00000559873.5

USP3-216, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5

Gene USP3, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-216ENST00000559873 KIAA1024LP59773 190 aa10.04□□□□□ -0.8
USP3-216ENST00000559873 CAV1Q03135 178 aa10.04□□□□□ -0.8
USP3-216ENST00000559873 CSRP2Q16527 193 aa10.04□□□□□ -0.8
USP3-216ENST00000559873 SKIDA1Q1XH10 827 aa10.04□□□□□ -0.8
USP3-216ENST00000559873 WSCD2Q2TBF2 565 aa10.04□□□□□ -0.8
USP3-216ENST00000559873 PCID2Q5JVF3 399 aa10.04□□□□□ -0.8
USP3-216ENST00000559873 PLA2G2CQ5R387 149 aa10.04□□□□□ -0.8
USP3-216ENST00000559873 ALS2CLQ60I27 953 aa10.04□□□□□ -0.8
USP3-216ENST00000559873 CASC4Q6P4E1 433 aa10.04□□□□□ -0.8
USP3-216ENST00000559873 ADAMTSL4Q6UY14 1074 aa10.04□□□□□ -0.8
USP3-216ENST00000559873 PARGQ86W56 976 aa10.04□□□□□ -0.8
USP3-216ENST00000559873 PHYKPLQ8IUZ5 450 aa10.04□□□□□ -0.8
USP3-216ENST00000559873 TTC30BQ8N4P2 665 aa10.04□□□□□ -0.8
USP3-216ENST00000559873 TRAM1L1Q8N609 369 aa10.04□□□□□ -0.8
USP3-216ENST00000559873 C1orf216Q8TAB5 229 aa10.04□□□□□ -0.8
USP3-216ENST00000559873 STYXQ8WUJ0 223 aa10.04□□□□□ -0.8
USP3-216ENST00000559873 SERPINB12Q96P63 405 aa10.04□□□□□ -0.8
USP3-216ENST00000559873 CARD6Q9BX69 1037 aa10.04□□□□□ -0.8
USP3-216ENST00000559873 TRIM31Q9BZY9 425 aa10.04□□□□□ -0.8
USP3-216ENST00000559873 ZCCHC2Q9C0B9 1178 aaKnown RBP10.04□□□□□ -0.8
USP3-216ENST00000559873 ABCG8Q9H221 673 aa10.04□□□□□ -0.8
USP3-216ENST00000559873 DPH5Q9H2P9 285 aa10.04□□□□□ -0.8
USP3-216ENST00000559873 L2HGDHQ9H9P8 463 aa10.04□□□□□ -0.8
USP3-216ENST00000559873 EBF2Q9HAK2 575 aa10.04□□□□□ -0.8
USP3-216ENST00000559873 TMEM74BQ9NUR3 256 aa10.04□□□□□ -0.8
USP3-216ENST00000559873 PIH1D1Q9NWS0 290 aaKnown RBP10.04□□□□□ -0.8
USP3-216ENST00000559873 IL17CQ9P0M4 197 aa10.04□□□□□ -0.8
USP3-216ENST00000559873 WHRNQ9P202 907 aa10.04□□□□□ -0.8
USP3-216ENST00000559873 ANAPC5Q9UJX4 755 aa10.04□□□□□ -0.8
USP3-216ENST00000559873 RIMKLBQ9ULI2 386 aa10.04□□□□□ -0.8
USP3-216ENST00000559873 TCAF1Q9Y4C2 921 aa10.04□□□□□ -0.8
USP3-216ENST00000559873 FAM186AA6NE01 2351 aa10.04□□□□□ -0.8
USP3-216ENST00000559873 GVINP1Q7Z2Y8 2422 aa10.04□□□□□ -0.8
USP3-216ENST00000559873 ZFHX2Q9C0A1 2572 aaPredicted RBP10.03□□□□□ -0.8
USP3-216ENST00000559873 A0A1W2PR77 199 aa10.03□□□□□ -0.8
USP3-216ENST00000559873 MAGEB16A2A368 324 aa10.03□□□□□ -0.8
USP3-216ENST00000559873 SDR42E2A6NKP2 422 aa10.03□□□□□ -0.8
USP3-216ENST00000559873 H3BM21 787 aa10.03□□□□□ -0.8
USP3-216ENST00000559873 GOLGA8MH3BSY2 632 aa10.03□□□□□ -0.8
USP3-216ENST00000559873 AURKAO14965 403 aa10.03□□□□□ -0.8
USP3-216ENST00000559873 LDB2O43679 373 aa10.03□□□□□ -0.8
USP3-216ENST00000559873 DFNA5O60443 496 aa10.03□□□□□ -0.8
USP3-216ENST00000559873 PRAMEF1O95521 474 aa10.03□□□□□ -0.8
USP3-216ENST00000559873 HOXC4P09017 264 aaPredicted RBP10.03□□□□□ -0.8
USP3-216ENST00000559873 ZNF806P0C7X5 589 aa10.03□□□□□ -0.8
USP3-216ENST00000559873 BPIP17213 487 aa10.03□□□□□ -0.8
USP3-216ENST00000559873 TPH1P17752 444 aa10.03□□□□□ -0.8
USP3-216ENST00000559873 GM2AP17900 193 aa10.03□□□□□ -0.8
USP3-216ENST00000559873 PAMP19021 973 aa10.03□□□□□ -0.8
USP3-216ENST00000559873 ITGALP20701 1170 aa10.03□□□□□ -0.8
USP3-216ENST00000559873 GRIA1P42261 906 aa10.03□□□□□ -0.8
USP3-216ENST00000559873 RPL21P46778 160 aaKnown RBP10.03□□□□□ -0.8
USP3-216ENST00000559873 ARRB1P49407 418 aaPredicted RBP10.03□□□□□ -0.8
USP3-216ENST00000559873 CSNK1EP49674 416 aaKnown RBP10.03□□□□□ -0.8
USP3-216ENST00000559873 BLKP51451 505 aa10.03□□□□□ -0.8
USP3-216ENST00000559873 ITGA8P53708 1063 aa10.03□□□□□ -0.8
USP3-216ENST00000559873 ARL4CP56559 192 aa10.03□□□□□ -0.8
USP3-216ENST00000559873 CLDN2P57739 230 aa10.03□□□□□ -0.8
USP3-216ENST00000559873 NXPH1P58417 271 aa10.03□□□□□ -0.8
USP3-216ENST00000559873 PFN3P60673 137 aa10.03□□□□□ -0.8
USP3-216ENST00000559873 TUBB4BP68371 445 aa10.03□□□□□ -0.8
USP3-216ENST00000559873 SPEM2Q0P670 501 aa10.03□□□□□ -0.8
USP3-216ENST00000559873 GRIK2Q13002 908 aa10.03□□□□□ -0.8
USP3-216ENST00000559873 PDE1CQ14123 709 aaPredicted RBP10.03□□□□□ -0.8
USP3-216ENST00000559873 INPP5AQ14642 412 aa10.03□□□□□ -0.8
USP3-216ENST00000559873 NFATC4Q14934 902 aa10.03□□□□□ -0.8
USP3-216ENST00000559873 PTPRRQ15256 657 aa10.03□□□□□ -0.8
USP3-216ENST00000559873 HENMT1Q5T8I9 393 aaKnown RBP10.03□□□□□ -0.8
USP3-216ENST00000559873 ANKRD22Q5VYY1 191 aa10.03□□□□□ -0.8
USP3-216ENST00000559873 HIBCHQ6NVY1 386 aaPredicted RBP10.03□□□□□ -0.8
USP3-216ENST00000559873 PNCKQ6P2M8 343 aa10.03□□□□□ -0.8
USP3-216ENST00000559873 MACC1Q6ZN28 852 aa10.03□□□□□ -0.8
USP3-216ENST00000559873 Q6ZSR6 202 aa10.03□□□□□ -0.8
USP3-216ENST00000559873 CEP128Q6ZU80 1094 aa10.03□□□□□ -0.8
USP3-216ENST00000559873 ZNF534Q76KX8 674 aa10.03□□□□□ -0.8
USP3-216ENST00000559873 HEATR4Q86WZ0 1026 aa10.03□□□□□ -0.8
USP3-216ENST00000559873 GPR26Q8NDV2 337 aa10.03□□□□□ -0.8
USP3-216ENST00000559873 OR13H1Q8NG92 308 aa10.03□□□□□ -0.8
USP3-216ENST00000559873 OR4K2Q8NGD2 314 aa10.03□□□□□ -0.8
USP3-216ENST00000559873 SCAMP4Q969E2 229 aa10.03□□□□□ -0.8
USP3-216ENST00000559873 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.03□□□□□ -0.82e-7■■■■□ 19.6
USP3-216ENST00000559873 ULK4Q96C45 1275 aa10.03□□□□□ -0.8
USP3-216ENST00000559873 WDR92Q96MX6 357 aa10.03□□□□□ -0.8
USP3-216ENST00000559873 NAT9Q9BTE0 207 aa10.03□□□□□ -0.8
USP3-216ENST00000559873 RIOK2Q9BVS4 552 aaKnown RBP10.03□□□□□ -0.8
USP3-216ENST00000559873 FAM129AQ9BZQ8 928 aa10.03□□□□□ -0.8
USP3-216ENST00000559873 MRM3Q9HC36 420 aaKnown RBP10.03□□□□□ -0.8
USP3-216ENST00000559873 CAPN10Q9HC96 672 aa10.03□□□□□ -0.8
USP3-216ENST00000559873 BPIFA1Q9NP55 256 aa10.03□□□□□ -0.8
USP3-216ENST00000559873 MBNL1Q9NR56 388 aaKnown RBP10.03□□□□□ -0.8
USP3-216ENST00000559873 SEMA4GQ9NTN9 838 aa10.03□□□□□ -0.8
USP3-216ENST00000559873 CA5BQ9Y2D0 317 aa10.03□□□□□ -0.8
USP3-216ENST00000559873 ANKRD6Q9Y2G4 727 aa10.03□□□□□ -0.8
USP3-216ENST00000559873 FNDC3AQ9Y2H6 1198 aaKnown RBP10.03□□□□□ -0.8
USP3-216ENST00000559873 SNX24Q9Y343 169 aa10.03□□□□□ -0.8
USP3-216ENST00000559873 SLC30A1Q9Y6M5 507 aa10.03□□□□□ -0.8
USP3-216ENST00000559873 WDFY4Q6ZS81 3184 aa10.03□□□□□ -0.8
USP3-216ENST00000559873 MYO15AQ9UKN7 3530 aa10.03□□□□□ -0.8
USP3-216ENST00000559873 PLXNA2O75051 1894 aa10.02□□□□□ -0.8
USP3-216ENST00000559873 A0A1B0GVT2 93 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms