RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 CTBSQ01459 385 aa13.06□□□□□ -0.32
TPM1-220ENST00000559556 SQSTM1Q13501 440 aa13.06□□□□□ -0.32
TPM1-220ENST00000559556 PEX6Q13608 980 aa13.06□□□□□ -0.32
TPM1-220ENST00000559556 E4F1Q66K89 784 aaPredicted RBP13.06□□□□□ -0.32
TPM1-220ENST00000559556 DENND2CQ68D51 928 aa13.06□□□□□ -0.32
TPM1-220ENST00000559556 RAET1GQ6H3X3 334 aa13.06□□□□□ -0.32
TPM1-220ENST00000559556 TMCO3Q6UWJ1 677 aa13.06□□□□□ -0.32
TPM1-220ENST00000559556 Q6ZVL8 140 aa13.06□□□□□ -0.32
TPM1-220ENST00000559556 ZNF571Q7Z3V5 609 aaPredicted RBP13.06□□□□□ -0.32
TPM1-220ENST00000559556 POLNQ7Z5Q5 900 aa13.06□□□□□ -0.32
TPM1-220ENST00000559556 OR4D9Q8NGE8 314 aa13.06□□□□□ -0.32
TPM1-220ENST00000559556 PTCD2Q8WV60 388 aaKnown RBP13.06□□□□□ -0.32
TPM1-220ENST00000559556 ZNF653Q96CK0 615 aa13.06□□□□□ -0.32
TPM1-220ENST00000559556 SCRN2Q96FV2 425 aa13.06□□□□□ -0.32
TPM1-220ENST00000559556 CCDC74BQ96LY2 380 aa13.06□□□□□ -0.32
TPM1-220ENST00000559556 TAAR9Q96RI9 348 aa13.06□□□□□ -0.32
TPM1-220ENST00000559556 SUDS3Q9H7L9 328 aaPredicted RBP13.06□□□□□ -0.32
TPM1-220ENST00000559556 PCDHGA3Q9Y5H0 932 aa13.06□□□□□ -0.32
TPM1-220ENST00000559556 FER1L5A0AVI2 2057 aa13.06□□□□□ -0.32
TPM1-220ENST00000559556 IGHV1OR21-1A0A087WYE8 117 aa13.05□□□□□ -0.32
TPM1-220ENST00000559556 PPM1DO15297 605 aa13.05□□□□□ -0.32
TPM1-220ENST00000559556 FTLP02792 175 aaPredicted RBP13.05□□□□□ -0.32
TPM1-220ENST00000559556 THRAP10827 490 aa13.05□□□□□ -0.32
TPM1-220ENST00000559556 TCF4P15884 667 aa13.05□□□□□ -0.32
TPM1-220ENST00000559556 CSF2RBP32927 897 aa13.05□□□□□ -0.32
TPM1-220ENST00000559556 FASLGP48023 281 aa13.05□□□□□ -0.32
TPM1-220ENST00000559556 CDH6P55285 790 aa13.05□□□□□ -0.32
TPM1-220ENST00000559556 CYP4F2P78329 520 aa13.05□□□□□ -0.32
TPM1-220ENST00000559556 ASIC2Q16515 512 aa13.05□□□□□ -0.32
TPM1-220ENST00000559556 SMTNL2Q2TAL5 461 aa13.05□□□□□ -0.32
TPM1-220ENST00000559556 CRYBG3Q68DQ2 2970 aa13.05□□□□□ -0.32
TPM1-220ENST00000559556 ADAMTSL4Q6UY14 1074 aa13.05□□□□□ -0.32
TPM1-220ENST00000559556 USP45Q70EL2 814 aa13.05□□□□□ -0.32
TPM1-220ENST00000559556 TECPR1Q7Z6L1 1165 aa13.05□□□□□ -0.32
TPM1-220ENST00000559556 TSPAN33Q86UF1 283 aa13.05□□□□□ -0.32
TPM1-220ENST00000559556 BBS5Q8N3I7 341 aa13.05□□□□□ -0.32
TPM1-220ENST00000559556 ATPAF2Q8N5M1 289 aa13.05□□□□□ -0.32
TPM1-220ENST00000559556 AOPEPQ8N6M6 819 aa13.05□□□□□ -0.32
TPM1-220ENST00000559556 PMEPA1Q969W9 287 aa13.05□□□□□ -0.32
TPM1-220ENST00000559556 TRIM11Q96F44 468 aa13.05□□□□□ -0.32
TPM1-220ENST00000559556 CSPG4P5Q96PW8 444 aa13.05□□□□□ -0.32
TPM1-220ENST00000559556 DPYSL5Q9BPU6 564 aa13.05□□□□□ -0.32
TPM1-220ENST00000559556 DDA1Q9BW61 102 aa13.05□□□□□ -0.32
TPM1-220ENST00000559556 SLC12A9Q9BXP2 914 aa13.05□□□□□ -0.32
TPM1-220ENST00000559556 TRIM4Q9C037 500 aa13.05□□□□□ -0.32
TPM1-220ENST00000559556 HAUS4Q9H6D7 363 aa13.05□□□□□ -0.32
TPM1-220ENST00000559556 AIPL1Q9NZN9 384 aa13.05□□□□□ -0.32
TPM1-220ENST00000559556 IL17BQ9UHF5 180 aa13.05□□□□□ -0.32
TPM1-220ENST00000559556 ITPR2Q14571 2701 aa13.05□□□□□ -0.32
TPM1-220ENST00000559556 GOLGA6CA6NDK9 693 aa13.04□□□□□ -0.32
TPM1-220ENST00000559556 GOLGA6BA6NDN3 693 aa13.04□□□□□ -0.32
TPM1-220ENST00000559556 DDX3XO00571 662 aaKnown RBP eCLIP13.04□□□□□ -0.322e-8■■■■□ 19.9
TPM1-220ENST00000559556 ARHGAP6O43182 974 aa13.04□□□□□ -0.32
TPM1-220ENST00000559556 SUV39H1O43463 412 aa13.04□□□□□ -0.32
TPM1-220ENST00000559556 PPFIA2O75334 1257 aa13.04□□□□□ -0.32
TPM1-220ENST00000559556 GOLGA6DP0CG33 693 aa13.04□□□□□ -0.32
TPM1-220ENST00000559556 MYBL1P10243 752 aa13.04□□□□□ -0.32
TPM1-220ENST00000559556 AMPD1P23109 780 aa13.04□□□□□ -0.32
TPM1-220ENST00000559556 SERPINB6P35237 376 aa13.04□□□□□ -0.32
TPM1-220ENST00000559556 MMP13P45452 471 aa13.04□□□□□ -0.32
TPM1-220ENST00000559556 POLD2P49005 469 aa13.04□□□□□ -0.32
TPM1-220ENST00000559556 ATP1A2P50993 1020 aa13.04□□□□□ -0.32
TPM1-220ENST00000559556 MAXP61244 160 aa13.04□□□□□ -0.32
TPM1-220ENST00000559556 GPLD1P80108 840 aa13.04□□□□□ -0.32
TPM1-220ENST00000559556 NFKB2Q00653 900 aa13.04□□□□□ -0.32
TPM1-220ENST00000559556 BOLA3Q53S33 107 aa13.04□□□□□ -0.32
TPM1-220ENST00000559556 ARMC12Q5T9G4 340 aa13.04□□□□□ -0.32
TPM1-220ENST00000559556 ATG14Q6ZNE5 492 aa13.04□□□□□ -0.32
TPM1-220ENST00000559556 ZNF765Q7L2R6 523 aa13.04□□□□□ -0.32
TPM1-220ENST00000559556 AGBL5Q8NDL9 886 aa13.04□□□□□ -0.32
TPM1-220ENST00000559556 CCDC112Q8NEF3 446 aa13.04□□□□□ -0.32
TPM1-220ENST00000559556 TEKT4Q8WW24 435 aa13.04□□□□□ -0.32
TPM1-220ENST00000559556 PIH1D2Q8WWB5 315 aa13.04□□□□□ -0.32
TPM1-220ENST00000559556 NKD1Q969G9 470 aa13.04□□□□□ -0.32
TPM1-220ENST00000559556 OR2M4Q96R27 311 aa13.04□□□□□ -0.32
TPM1-220ENST00000559556 ISCUQ9H1K1 167 aa13.04□□□□□ -0.32
TPM1-220ENST00000559556 ABCG8Q9H221 673 aa13.04□□□□□ -0.32
TPM1-220ENST00000559556 ADNPQ9H2P0 1102 aa13.04□□□□□ -0.32
TPM1-220ENST00000559556 MRPL47Q9HD33 250 aaKnown RBP13.04□□□□□ -0.32
TPM1-220ENST00000559556 RTN4Q9NQC3 1192 aaKnown RBP13.04□□□□□ -0.32
TPM1-220ENST00000559556 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.04□□□□□ -0.32
TPM1-220ENST00000559556 GOLGA6AQ9NYA3 693 aa13.04□□□□□ -0.32
TPM1-220ENST00000559556 UNC79Q9P2D8 2635 aa13.04□□□□□ -0.32
TPM1-220ENST00000559556 CYSRT1A8MQ03 144 aa13.03□□□□□ -0.32
TPM1-220ENST00000559556 FZD6O60353 706 aa13.03□□□□□ -0.32
TPM1-220ENST00000559556 ZNF30P17039 623 aa13.03□□□□□ -0.32
TPM1-220ENST00000559556 UGT1A3P35503 534 aa13.03□□□□□ -0.32
TPM1-220ENST00000559556 ACTR1BP42025 376 aa13.03□□□□□ -0.32
TPM1-220ENST00000559556 GPR1P46091 355 aa13.03□□□□□ -0.32
TPM1-220ENST00000559556 ACTR1AP61163 376 aa13.03□□□□□ -0.32
TPM1-220ENST00000559556 BIRC2Q13490 618 aa13.03□□□□□ -0.32
TPM1-220ENST00000559556 CLCA4Q14CN2 919 aa13.03□□□□□ -0.32
TPM1-220ENST00000559556 PTPRRQ15256 657 aa13.03□□□□□ -0.32
TPM1-220ENST00000559556 PYCR3Q53H96 274 aa13.03□□□□□ -0.32
TPM1-220ENST00000559556 MARC1Q5VT66 337 aa13.03□□□□□ -0.32
TPM1-220ENST00000559556 LRRC66Q68CR7 880 aa13.03□□□□□ -0.32
TPM1-220ENST00000559556 ALG1LQ6GMV1 187 aa13.03□□□□□ -0.32
TPM1-220ENST00000559556 DOK6Q6PKX4 331 aa13.03□□□□□ -0.32
TPM1-220ENST00000559556 NLRP8Q86W28 1048 aa13.03□□□□□ -0.32
TPM1-220ENST00000559556 TEX26Q8N6G2 289 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms