RNA–Protein interactions for RNA: ENST00000559460.5

SMAD3-211, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-211ENST00000559460 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.62□□□□□ -0.877e-6■□□□□ 8.6
SMAD3-211ENST00000559460 ZNHIT2Q9UHR6 403 aa9.62□□□□□ -0.87
SMAD3-211ENST00000559460 RARRES3Q9UL19 164 aa9.62□□□□□ -0.87
SMAD3-211ENST00000559460 MN1Q10571 1320 aaPredicted RBP9.61□□□□□ -0.87
SMAD3-211ENST00000559460 TSPAN11A1L157 253 aa9.61□□□□□ -0.87
SMAD3-211ENST00000559460 GOLGA6L3A6NEY3 463 aa9.61□□□□□ -0.87
SMAD3-211ENST00000559460 TOX3O15405 576 aaPredicted RBP9.61□□□□□ -0.87
SMAD3-211ENST00000559460 MYL1P05976 194 aa9.61□□□□□ -0.87
SMAD3-211ENST00000559460 IVLP07476 585 aa9.61□□□□□ -0.87
SMAD3-211ENST00000559460 EDN3P14138 238 aa9.61□□□□□ -0.87
SMAD3-211ENST00000559460 AMD1P17707 334 aa9.61□□□□□ -0.87
SMAD3-211ENST00000559460 SERPINA4P29622 427 aa9.61□□□□□ -0.87
SMAD3-211ENST00000559460 GNA15P30679 374 aa9.61□□□□□ -0.87
SMAD3-211ENST00000559460 HNRNPH3P31942 346 aaKnown RBP9.61□□□□□ -0.87
SMAD3-211ENST00000559460 VAV2P52735 878 aa9.61□□□□□ -0.87
SMAD3-211ENST00000559460 POLR2LP62875 67 aaKnown RBP9.61□□□□□ -0.87
SMAD3-211ENST00000559460 LRP8Q14114 963 aa9.61□□□□□ -0.87
SMAD3-211ENST00000559460 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.61□□□□□ -0.87
SMAD3-211ENST00000559460 RAET1GQ6H3X3 334 aa9.61□□□□□ -0.87
SMAD3-211ENST00000559460 FAM199XQ6PEV8 388 aaPredicted RBP9.61□□□□□ -0.87
SMAD3-211ENST00000559460 LIPIQ6XZB0 460 aa9.61□□□□□ -0.87
SMAD3-211ENST00000559460 FAM183BPQ6ZVS7 135 aa9.61□□□□□ -0.87
SMAD3-211ENST00000559460 RRAGAQ7L523 313 aa9.61□□□□□ -0.87
SMAD3-211ENST00000559460 GALNT13Q8IUC8 556 aa9.61□□□□□ -0.87
SMAD3-211ENST00000559460 LZTR1Q8N653 840 aa9.61□□□□□ -0.87
SMAD3-211ENST00000559460 ARFGAP1Q8N6T3 406 aa9.61□□□□□ -0.87
SMAD3-211ENST00000559460 KAT5Q92993 513 aa9.61□□□□□ -0.87
SMAD3-211ENST00000559460 MR1Q95460 341 aa9.61□□□□□ -0.87
SMAD3-211ENST00000559460 PAGE5Q96GU1 130 aa9.61□□□□□ -0.87
SMAD3-211ENST00000559460 INTS4Q96HW7 963 aaKnown RBP9.61□□□□□ -0.87
SMAD3-211ENST00000559460 RUFY1Q96T51 708 aa9.61□□□□□ -0.87
SMAD3-211ENST00000559460 ATP13A3Q9H7F0 1226 aa9.61□□□□□ -0.87
SMAD3-211ENST00000559460 ANLNQ9NQW6 1124 aa9.61□□□□□ -0.87
SMAD3-211ENST00000559460 PPARGC1AQ9UBK2 798 aaKnown RBP9.61□□□□□ -0.87
SMAD3-211ENST00000559460 NAV3Q8IVL0 2385 aa9.61□□□□□ -0.87
SMAD3-211ENST00000559460 MTORP42345 2549 aa9.6□□□□□ -0.87
SMAD3-211ENST00000559460 PPP1R3GB7ZBB8 358 aa9.6□□□□□ -0.87
SMAD3-211ENST00000559460 SLC16A3O15427 465 aaKnown RBP9.6□□□□□ -0.87
SMAD3-211ENST00000559460 INSIG1O15503 277 aa9.6□□□□□ -0.87
SMAD3-211ENST00000559460 KCNN4O15554 427 aa9.6□□□□□ -0.87
SMAD3-211ENST00000559460 KDELR3O43731 214 aa9.6□□□□□ -0.87
SMAD3-211ENST00000559460 YEATS4O95619 227 aa9.6□□□□□ -0.87
SMAD3-211ENST00000559460 KLK3P07288 261 aaPredicted RBP9.6□□□□□ -0.87
SMAD3-211ENST00000559460 STSP08842 583 aa9.6□□□□□ -0.87
SMAD3-211ENST00000559460 ME1P48163 572 aa9.6□□□□□ -0.87
SMAD3-211ENST00000559460 ART1P52961 327 aa9.6□□□□□ -0.87
SMAD3-211ENST00000559460 GFERP55789 205 aa9.6□□□□□ -0.87
SMAD3-211ENST00000559460 PPP2R2AP63151 447 aa9.6□□□□□ -0.87
SMAD3-211ENST00000559460 CDK3Q00526 305 aa9.6□□□□□ -0.87
SMAD3-211ENST00000559460 SLC6A3Q01959 620 aa9.6□□□□□ -0.87
SMAD3-211ENST00000559460 TUBB3Q13509 450 aa9.6□□□□□ -0.87
SMAD3-211ENST00000559460 ZNF630Q2M218 657 aaPredicted RBP9.6□□□□□ -0.87
SMAD3-211ENST00000559460 INO80DQ53TQ3 878 aaPredicted RBP9.6□□□□□ -0.87
SMAD3-211ENST00000559460 MIIPQ5JXC2 388 aa9.6□□□□□ -0.87
SMAD3-211ENST00000559460 DENND2CQ68D51 928 aa9.6□□□□□ -0.87
SMAD3-211ENST00000559460 MTFR2Q6P444 385 aa9.6□□□□□ -0.87
SMAD3-211ENST00000559460 OLFML1Q6UWY5 402 aa9.6□□□□□ -0.87
SMAD3-211ENST00000559460 MARK2Q7KZI7 788 aaKnown RBP9.6□□□□□ -0.87
SMAD3-211ENST00000559460 SLC26A9Q7LBE3 791 aa9.6□□□□□ -0.87
SMAD3-211ENST00000559460 KCNMB4Q86W47 210 aa9.6□□□□□ -0.87
SMAD3-211ENST00000559460 CLEC1AQ8NC01 280 aa9.6□□□□□ -0.87
SMAD3-211ENST00000559460 ZNF606Q8WXB4 792 aa9.6□□□□□ -0.87
SMAD3-211ENST00000559460 TUBGCP5Q96RT8 1024 aa9.6□□□□□ -0.87
SMAD3-211ENST00000559460 CPXM1Q96SM3 734 aa9.6□□□□□ -0.87
SMAD3-211ENST00000559460 NPY6RQ99463 290 aa9.6□□□□□ -0.87
SMAD3-211ENST00000559460 TSG101Q99816 390 aa9.6□□□□□ -0.87
SMAD3-211ENST00000559460 TEX101Q9BY14 249 aa9.6□□□□□ -0.87
SMAD3-211ENST00000559460 GTPBP4Q9BZE4 634 aaKnown RBP9.6□□□□□ -0.87
SMAD3-211ENST00000559460 RETREG1Q9H6L5 497 aa9.6□□□□□ -0.87
SMAD3-211ENST00000559460 ZNF212Q9UDV6 495 aa9.6□□□□□ -0.87
SMAD3-211ENST00000559460 ARMCX3Q9UH62 379 aaPredicted RBP9.6□□□□□ -0.87
SMAD3-211ENST00000559460 PLEKHM1Q9Y4G2 1056 aa9.6□□□□□ -0.87
SMAD3-211ENST00000559460 CSMD2Q7Z408 3487 aa9.6□□□□□ -0.87
SMAD3-211ENST00000559460 CCDC168Q8NDH2 2452 aa9.6□□□□□ -0.87
SMAD3-211ENST00000559460 ARHGEF17Q96PE2 2063 aaPredicted RBP9.59□□□□□ -0.87
SMAD3-211ENST00000559460 LILRA5A6NI73 299 aa9.59□□□□□ -0.87
SMAD3-211ENST00000559460 TMEM200CA6NKL6 621 aa9.59□□□□□ -0.87
SMAD3-211ENST00000559460 A8MX80 341 aa9.59□□□□□ -0.87
SMAD3-211ENST00000559460 GRID2O43424 1007 aa9.59□□□□□ -0.87
SMAD3-211ENST00000559460 SNX2O60749 519 aa9.59□□□□□ -0.87
SMAD3-211ENST00000559460 CPNE3O75131 537 aaKnown RBP9.59□□□□□ -0.87
SMAD3-211ENST00000559460 RHOQP17081 205 aa9.59□□□□□ -0.87
SMAD3-211ENST00000559460 POLD2P49005 469 aa9.59□□□□□ -0.87
SMAD3-211ENST00000559460 ARL4DP49703 201 aa9.59□□□□□ -0.87
SMAD3-211ENST00000559460 GCNT1Q02742 428 aa9.59□□□□□ -0.87
SMAD3-211ENST00000559460 BCL2L1Q07817 233 aa9.59□□□□□ -0.87
SMAD3-211ENST00000559460 RALGDSQ12967 914 aa9.59□□□□□ -0.87
SMAD3-211ENST00000559460 ZNF235Q14590 738 aa9.59□□□□□ -0.87
SMAD3-211ENST00000559460 LLGL1Q15334 1064 aa9.59□□□□□ -0.87
SMAD3-211ENST00000559460 TMCO4Q5TGY1 634 aa9.59□□□□□ -0.87
SMAD3-211ENST00000559460 CACHD1Q5VU97 1274 aa9.59□□□□□ -0.87
SMAD3-211ENST00000559460 RPTNQ6XPR3 784 aa9.59□□□□□ -0.87
SMAD3-211ENST00000559460 ZNF517Q6ZMY9 492 aaPredicted RBP9.59□□□□□ -0.87
SMAD3-211ENST00000559460 DPPA4Q7L190 304 aa9.59□□□□□ -0.87
SMAD3-211ENST00000559460 MRGPRGQ86SM5 289 aa9.59□□□□□ -0.87
SMAD3-211ENST00000559460 RAB43Q86YS6 212 aa9.59□□□□□ -0.87
SMAD3-211ENST00000559460 ZDHHC17Q8IUH5 632 aa9.59□□□□□ -0.87
SMAD3-211ENST00000559460 PASD1Q8IV76 773 aa9.59□□□□□ -0.87
SMAD3-211ENST00000559460 CEP97Q8IW35 865 aa9.59□□□□□ -0.87
SMAD3-211ENST00000559460 TRIM48Q8IWZ4 208 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms