RNA–Protein interactions for RNA: ENST00000559433.5

LRRC28-214, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-214ENST00000559433 CLDN7O95471 211 aa12.55□□□□□ -0.4
LRRC28-214ENST00000559433 PTPN3P26045 913 aa12.55□□□□□ -0.4
LRRC28-214ENST00000559433 TEAD1P28347 426 aa12.55□□□□□ -0.4
LRRC28-214ENST00000559433 DPTQ07507 201 aa12.55□□□□□ -0.4
LRRC28-214ENST00000559433 PPP2R5EQ16537 467 aa12.55□□□□□ -0.4
LRRC28-214ENST00000559433 TEX44Q53QW1 395 aa12.55□□□□□ -0.4
LRRC28-214ENST00000559433 PERM1Q5SV97 790 aa12.55□□□□□ -0.4
LRRC28-214ENST00000559433 CCDC181Q5TID7 509 aa12.55□□□□□ -0.4
LRRC28-214ENST00000559433 DOK6Q6PKX4 331 aa12.55□□□□□ -0.4
LRRC28-214ENST00000559433 LRRC69Q6ZNQ3 347 aa12.55□□□□□ -0.4
LRRC28-214ENST00000559433 ZNF765Q7L2R6 523 aa12.55□□□□□ -0.4
LRRC28-214ENST00000559433 TAF8Q7Z7C8 310 aa12.55□□□□□ -0.4
LRRC28-214ENST00000559433 ZC3H18Q86VM9 953 aaKnown RBP12.55□□□□□ -0.4
LRRC28-214ENST00000559433 TMEM139Q8IV31 216 aa12.55□□□□□ -0.4
LRRC28-214ENST00000559433 KIAA1524Q8TCG1 905 aa12.55□□□□□ -0.4
LRRC28-214ENST00000559433 NAT6Q93015 286 aa12.55□□□□□ -0.4
LRRC28-214ENST00000559433 SCAMP4Q969E2 229 aa12.55□□□□□ -0.4
LRRC28-214ENST00000559433 QKIQ96PU8 341 aaKnown RBP eCLIP12.55□□□□□ -0.4
LRRC28-214ENST00000559433 LYSMD1Q96S90 227 aa12.55□□□□□ -0.4
LRRC28-214ENST00000559433 MLPHQ9BV36 600 aaPredicted RBP12.55□□□□□ -0.4
LRRC28-214ENST00000559433 HEMGNQ9BXL5 484 aa12.55□□□□□ -0.4
LRRC28-214ENST00000559433 MFRPQ9BY79 579 aa12.55□□□□□ -0.4
LRRC28-214ENST00000559433 FRMD8Q9BZ67 464 aaPredicted RBP12.55□□□□□ -0.4
LRRC28-214ENST00000559433 LACRTQ9GZZ8 138 aa12.55□□□□□ -0.4
LRRC28-214ENST00000559433 TMEM168Q9H0V1 697 aa12.55□□□□□ -0.4
LRRC28-214ENST00000559433 SLC25A51Q9H1U9 297 aa12.55□□□□□ -0.4
LRRC28-214ENST00000559433 SYNDIG1Q9H7V2 258 aa12.55□□□□□ -0.4
LRRC28-214ENST00000559433 CARS2Q9HA77 564 aaKnown RBP12.55□□□□□ -0.4
LRRC28-214ENST00000559433 GLOD4Q9HC38 313 aa12.55□□□□□ -0.4
LRRC28-214ENST00000559433 SCN8AQ9UQD0 1980 aa12.55□□□□□ -0.4
LRRC28-214ENST00000559433 ARHGEF17Q96PE2 2063 aaPredicted RBP12.55□□□□□ -0.4
LRRC28-214ENST00000559433 CFAP47Q6ZTR5 3102 aa12.55□□□□□ -0.4
LRRC28-214ENST00000559433 CHD6Q8TD26 2715 aa12.54□□□□□ -0.4
LRRC28-214ENST00000559433 APC2O95996 2303 aa12.54□□□□□ -0.4
LRRC28-214ENST00000559433 ACACAQ13085 2346 aa12.54□□□□□ -0.4
LRRC28-214ENST00000559433 B4DGG1 531 aa12.54□□□□□ -0.4
LRRC28-214ENST00000559433 PJA2O43164 708 aa12.54□□□□□ -0.4
LRRC28-214ENST00000559433 MTSS1O43312 755 aa12.54□□□□□ -0.4
LRRC28-214ENST00000559433 SOD1P00441 154 aa12.54□□□□□ -0.4
LRRC28-214ENST00000559433 CEACAM5P06731 702 aa12.54□□□□□ -0.4
LRRC28-214ENST00000559433 PYGLP06737 847 aa12.54□□□□□ -0.4
LRRC28-214ENST00000559433 GNPDA1P46926 289 aa12.54□□□□□ -0.4
LRRC28-214ENST00000559433 COPS2P61201 443 aa12.54□□□□□ -0.4
LRRC28-214ENST00000559433 CDK18Q07002 472 aa12.54□□□□□ -0.4
LRRC28-214ENST00000559433 BIRC2Q13490 618 aa12.54□□□□□ -0.4
LRRC28-214ENST00000559433 SLC14A2Q15849 920 aa12.54□□□□□ -0.4
LRRC28-214ENST00000559433 CDCP2Q5VXM1 449 aa12.54□□□□□ -0.4
LRRC28-214ENST00000559433 C19orf48Q6RUI8 117 aa12.54□□□□□ -0.4
LRRC28-214ENST00000559433 ADAMTSL4Q6UY14 1074 aa12.54□□□□□ -0.4
LRRC28-214ENST00000559433 BBS12Q6ZW61 710 aa12.54□□□□□ -0.4
LRRC28-214ENST00000559433 NRSN1Q8IZ57 195 aa12.54□□□□□ -0.4
LRRC28-214ENST00000559433 TXLNBQ8N3L3 684 aa12.54□□□□□ -0.4
LRRC28-214ENST00000559433 FAM46DQ8NEK8 389 aa12.54□□□□□ -0.4
LRRC28-214ENST00000559433 OR6C4Q8NGE1 309 aa12.54□□□□□ -0.4
LRRC28-214ENST00000559433 SPATA22Q8NHS9 363 aa12.54□□□□□ -0.4
LRRC28-214ENST00000559433 WDR48Q8TAF3 677 aa12.54□□□□□ -0.4
LRRC28-214ENST00000559433 CCHCR1Q8TD31 782 aa12.54□□□□□ -0.4
LRRC28-214ENST00000559433 HNRNPLLQ8WVV9 542 aaKnown RBP12.54□□□□□ -0.4
LRRC28-214ENST00000559433 TEKT5Q96M29 485 aa12.54□□□□□ -0.4
LRRC28-214ENST00000559433 DCBLD2Q96PD2 775 aa12.54□□□□□ -0.4
LRRC28-214ENST00000559433 TRIB3Q96RU7 358 aa12.54□□□□□ -0.4
LRRC28-214ENST00000559433 DESI2Q9BSY9 194 aa12.54□□□□□ -0.4
LRRC28-214ENST00000559433 RIOK2Q9BVS4 552 aaKnown RBP12.54□□□□□ -0.4
LRRC28-214ENST00000559433 PKD2L2Q9NZM6 624 aa12.54□□□□□ -0.4
LRRC28-214ENST00000559433 KLHL8Q9P2G9 620 aaPredicted RBP12.54□□□□□ -0.4
LRRC28-214ENST00000559433 SUFUQ9UMX1 484 aa12.54□□□□□ -0.4
LRRC28-214ENST00000559433 PCDHA3Q9Y5H8 950 aa12.54□□□□□ -0.4
LRRC28-214ENST00000559433 PKD1L2Q7Z442 2459 aa12.53□□□□□ -0.4
LRRC28-214ENST00000559433 MACROD2A1Z1Q3 448 aa12.53□□□□□ -0.4
LRRC28-214ENST00000559433 CCDC66A2RUB6 948 aa12.53□□□□□ -0.4
LRRC28-214ENST00000559433 GRID2IPA4D2P6 1211 aa12.53□□□□□ -0.4
LRRC28-214ENST00000559433 HACD1B0YJ81 288 aa12.53□□□□□ -0.4
LRRC28-214ENST00000559433 APOC4-APOC2K7ER74 178 aa12.53□□□□□ -0.4
LRRC28-214ENST00000559433 INPP4BO15327 924 aa12.53□□□□□ -0.4
LRRC28-214ENST00000559433 USP12O75317 370 aa12.53□□□□□ -0.4
LRRC28-214ENST00000559433 CSO75390 466 aaKnown RBP12.53□□□□□ -0.4
LRRC28-214ENST00000559433 PMPCBO75439 489 aa12.53□□□□□ -0.4
LRRC28-214ENST00000559433 MT-CYBP00156 380 aaPredicted RBP12.53□□□□□ -0.4
LRRC28-214ENST00000559433 APOC2P02655 101 aa12.53□□□□□ -0.4
LRRC28-214ENST00000559433 SLC4A1P02730 911 aa12.53□□□□□ -0.4
LRRC28-214ENST00000559433 NFKB1P19838 968 aa12.53□□□□□ -0.4
LRRC28-214ENST00000559433 CTNNA2P26232 953 aa12.53□□□□□ -0.4
LRRC28-214ENST00000559433 ACTN2P35609 894 aa12.53□□□□□ -0.4
LRRC28-214ENST00000559433 POLD2P49005 469 aa12.53□□□□□ -0.4
LRRC28-214ENST00000559433 SPINT3P49223 89 aa12.53□□□□□ -0.4
LRRC28-214ENST00000559433 RWDD2BP57060 319 aa12.53□□□□□ -0.4
LRRC28-214ENST00000559433 WASHC5Q12768 1159 aa12.53□□□□□ -0.4
LRRC28-214ENST00000559433 ILF3Q12906 894 aaKnown RBP eCLIP12.53□□□□□ -0.4
LRRC28-214ENST00000559433 PEX6Q13608 980 aa12.53□□□□□ -0.4
LRRC28-214ENST00000559433 RTP5Q14D33 572 aa12.53□□□□□ -0.4
LRRC28-214ENST00000559433 CCDC70Q6NSX1 233 aa12.53□□□□□ -0.4
LRRC28-214ENST00000559433 LYSMD3Q7Z3D4 306 aa12.53□□□□□ -0.4
LRRC28-214ENST00000559433 TRIM74Q86UV6 250 aa12.53□□□□□ -0.4
LRRC28-214ENST00000559433 RAVER1Q8IY67 606 aaKnown RBP12.53□□□□□ -0.4
LRRC28-214ENST00000559433 LSMEM2Q8N112 164 aa12.53□□□□□ -0.4
LRRC28-214ENST00000559433 LRRC57Q8N9N7 239 aa12.53□□□□□ -0.4
LRRC28-214ENST00000559433 CCL4L1Q8NHW4 92 aa12.53□□□□□ -0.4
LRRC28-214ENST00000559433 CCDC74AQ96AQ1 378 aa12.53□□□□□ -0.4
LRRC28-214ENST00000559433 TADA1Q96BN2 335 aa12.53□□□□□ -0.4
LRRC28-214ENST00000559433 GRAMD1AQ96CP6 724 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms