RNA–Protein interactions for RNA: ENST00000559151.1

CASC4-208, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 883 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-208ENST00000559151 GGNBP1Q5YKI7 109 aa11.15□□□□□ -0.62
CASC4-208ENST00000559151 SIGIRRQ6IA17 410 aa11.15□□□□□ -0.62
CASC4-208ENST00000559151 METTL2BQ6P1Q9 378 aaKnown RBP11.15□□□□□ -0.62
CASC4-208ENST00000559151 B3GNT6Q6ZMB0 384 aa11.15□□□□□ -0.62
CASC4-208ENST00000559151 DENND5BQ6ZUT9 1274 aa11.15□□□□□ -0.62
CASC4-208ENST00000559151 SCYL3Q8IZE3 742 aa11.15□□□□□ -0.62
CASC4-208ENST00000559151 LRRC59Q96AG4 307 aaKnown RBP11.15□□□□□ -0.62
CASC4-208ENST00000559151 URB1-AS1Q96HZ7 61 aa11.15□□□□□ -0.62
CASC4-208ENST00000559151 METTL2AQ96IZ6 378 aaKnown RBP11.15□□□□□ -0.62
CASC4-208ENST00000559151 KIFC3Q9BVG8 833 aa11.15□□□□□ -0.62
CASC4-208ENST00000559151 TAB2Q9NYJ8 693 aa11.15□□□□□ -0.62
CASC4-208ENST00000559151 FBXW11Q9UKB1 542 aa11.15□□□□□ -0.62
CASC4-208ENST00000559151 ZNF804BA4D1E1 1349 aa11.14□□□□□ -0.63
CASC4-208ENST00000559151 IGLV5-39A0A0G2JS06 123 aa11.14□□□□□ -0.63
CASC4-208ENST00000559151 BECN2A8MW95 431 aa11.14□□□□□ -0.63
CASC4-208ENST00000559151 HIST1H2ABP04908 130 aa11.14□□□□□ -0.63
CASC4-208ENST00000559151 TRIM21P19474 475 aaKnown RBP11.14□□□□□ -0.63
CASC4-208ENST00000559151 HIST1H2ADP20671 130 aa11.14□□□□□ -0.63
CASC4-208ENST00000559151 CD38P28907 300 aa11.14□□□□□ -0.63
CASC4-208ENST00000559151 INHBEP58166 350 aa11.14□□□□□ -0.63
CASC4-208ENST00000559151 UBXN2AP68543 259 aa11.14□□□□□ -0.63
CASC4-208ENST00000559151 HNF4GQ14541 408 aa11.14□□□□□ -0.63
CASC4-208ENST00000559151 SPECC1Q5M775 1068 aa11.14□□□□□ -0.63
CASC4-208ENST00000559151 HIST3H2AQ7L7L0 130 aa11.14□□□□□ -0.63
CASC4-208ENST00000559151 SDCCAG8Q86SQ7 713 aaPredicted RBP11.14□□□□□ -0.63
CASC4-208ENST00000559151 SRRM1Q8IYB3 904 aaKnown RBP11.14□□□□□ -0.63
CASC4-208ENST00000559151 SYT2Q8N9I0 419 aaPredicted RBP11.14□□□□□ -0.63
CASC4-208ENST00000559151 CNDP2Q96KP4 475 aaKnown RBP11.14□□□□□ -0.63
CASC4-208ENST00000559151 NLRP4Q96MN2 994 aa11.14□□□□□ -0.63
CASC4-208ENST00000559151 HAUS8Q9BT25 410 aa11.14□□□□□ -0.63
CASC4-208ENST00000559151 SLC35C2Q9NQQ7 365 aa11.14□□□□□ -0.63
CASC4-208ENST00000559151 ACSS1Q9NUB1 689 aaPredicted RBP11.14□□□□□ -0.63
CASC4-208ENST00000559151 PLAGL1Q9UM63 463 aa11.14□□□□□ -0.63
CASC4-208ENST00000559151 EXO1Q9UQ84 846 aaKnown RBP11.14□□□□□ -0.63
CASC4-208ENST00000559151 APOA4P06727 396 aa11.13□□□□□ -0.63
CASC4-208ENST00000559151 HOXC9P31274 260 aa11.13□□□□□ -0.63
CASC4-208ENST00000559151 ENTPD1P49961 510 aa11.13□□□□□ -0.63
CASC4-208ENST00000559151 GPR143P51810 404 aa11.13□□□□□ -0.63
CASC4-208ENST00000559151 PPP5CP53041 499 aa11.13□□□□□ -0.63
CASC4-208ENST00000559151 ECT2LQ008S8 904 aa11.13□□□□□ -0.63
CASC4-208ENST00000559151 AIMP1Q12904 312 aaKnown RBP11.13□□□□□ -0.63
CASC4-208ENST00000559151 KCNC3Q14003 757 aa11.13□□□□□ -0.63
CASC4-208ENST00000559151 RABEP1Q15276 862 aa11.13□□□□□ -0.63
CASC4-208ENST00000559151 DLG2Q15700 870 aa11.13□□□□□ -0.63
CASC4-208ENST00000559151 PNLIPRP3Q17RR3 467 aa11.13□□□□□ -0.63
CASC4-208ENST00000559151 PRTGQ2VWP7 1150 aa11.13□□□□□ -0.63
CASC4-208ENST00000559151 IGSF11Q5DX21 431 aa11.13□□□□□ -0.63
CASC4-208ENST00000559151 RARS2Q5T160 578 aaKnown RBP11.13□□□□□ -0.63
CASC4-208ENST00000559151 ADALQ6DHV7 355 aa11.13□□□□□ -0.63
CASC4-208ENST00000559151 TRPC4APQ8TEL6 797 aa11.13□□□□□ -0.63
CASC4-208ENST00000559151 SIL1Q9H173 461 aa11.13□□□□□ -0.63
CASC4-208ENST00000559151 OSGEPL1Q9H4B0 414 aa11.13□□□□□ -0.63
CASC4-208ENST00000559151 CCDC177Q9NQR7 707 aaPredicted RBP11.13□□□□□ -0.63
CASC4-208ENST00000559151 CDC14AQ9UNH5 594 aa11.13□□□□□ -0.63
CASC4-208ENST00000559151 hCG_1809904A0A1W2PP81 198 aa11.12□□□□□ -0.63
CASC4-208ENST00000559151 A0A1W2PPE2 198 aa11.12□□□□□ -0.63
CASC4-208ENST00000559151 A0A1W2PR64 198 aa11.12□□□□□ -0.63
CASC4-208ENST00000559151 SYF2O95926 243 aaKnown RBP11.12□□□□□ -0.63
CASC4-208ENST00000559151 ICAM1P05362 532 aa11.12□□□□□ -0.63
CASC4-208ENST00000559151 PPATQ06203 517 aa11.12□□□□□ -0.63
CASC4-208ENST00000559151 KLF9Q13886 244 aaPredicted RBP11.12□□□□□ -0.63
CASC4-208ENST00000559151 KRT77Q7Z794 578 aa11.12□□□□□ -0.63
CASC4-208ENST00000559151 POMGNT2Q8NAT1 580 aa11.12□□□□□ -0.63
CASC4-208ENST00000559151 NSMCE1Q8WV22 266 aa11.12□□□□□ -0.63
CASC4-208ENST00000559151 TMCO6Q96DC7 493 aa11.12□□□□□ -0.63
CASC4-208ENST00000559151 ZMAT2Q96NC0 199 aaKnown RBP11.12□□□□□ -0.63
CASC4-208ENST00000559151 PLAC1Q9HBJ0 212 aa11.12□□□□□ -0.63
CASC4-208ENST00000559151 WNT9BO14905 357 aa11.11□□□□□ -0.63
CASC4-208ENST00000559151 AVILO75366 819 aa11.11□□□□□ -0.63
CASC4-208ENST00000559151 LCATP04180 440 aa11.11□□□□□ -0.63
CASC4-208ENST00000559151 NAGAP17050 411 aa11.11□□□□□ -0.63
CASC4-208ENST00000559151 HNRNPH1P31943 449 aaKnown RBP11.11□□□□□ -0.63
CASC4-208ENST00000559151 GRAPQ13588 217 aa11.11□□□□□ -0.63
CASC4-208ENST00000559151 ZNF805Q5CZA5 627 aa11.11□□□□□ -0.63
CASC4-208ENST00000559151 ERMARDQ5T6L9 678 aa11.11□□□□□ -0.63
CASC4-208ENST00000559151 AADATQ8N5Z0 425 aa11.11□□□□□ -0.63
CASC4-208ENST00000559151 POGLUT1Q8NBL1 392 aa11.11□□□□□ -0.63
CASC4-208ENST00000559151 MMP25Q9NPA2 562 aa11.11□□□□□ -0.63
CASC4-208ENST00000559151 OR14J1Q9UGF5 321 aa11.11□□□□□ -0.63
CASC4-208ENST00000559151 H7C0S8 307 aa11.1□□□□□ -0.63
CASC4-208ENST00000559151 HSPA12AO43301 675 aa11.1□□□□□ -0.63
CASC4-208ENST00000559151 ZIC3O60481 467 aa11.1□□□□□ -0.63
CASC4-208ENST00000559151 VNN2O95498 520 aa11.1□□□□□ -0.63
CASC4-208ENST00000559151 UBA1P22314 1058 aaKnown RBP11.1□□□□□ -0.63
CASC4-208ENST00000559151 GRSF1Q12849 480 aaKnown RBP eCLIP11.1□□□□□ -0.63
CASC4-208ENST00000559151 BAATQ14032 418 aaPredicted RBP11.1□□□□□ -0.63
CASC4-208ENST00000559151 EFNB3Q15768 340 aa11.1□□□□□ -0.63
CASC4-208ENST00000559151 KYNUQ16719 465 aa11.1□□□□□ -0.63
CASC4-208ENST00000559151 PXDC1Q5TGL8 231 aa11.1□□□□□ -0.63
CASC4-208ENST00000559151 SYCE2Q6PIF2 218 aa11.1□□□□□ -0.63
CASC4-208ENST00000559151 DLK2Q6UY11 383 aa11.1□□□□□ -0.63
CASC4-208ENST00000559151 CACNA2D4Q7Z3S7 1137 aa11.1□□□□□ -0.63
CASC4-208ENST00000559151 ARID3BQ8IVW6 561 aaPredicted RBP11.1□□□□□ -0.63
CASC4-208ENST00000559151 MINDY1Q8N5J2 469 aa11.1□□□□□ -0.63
CASC4-208ENST00000559151 MOAP1Q96BY2 351 aa11.1□□□□□ -0.63
CASC4-208ENST00000559151 CEP295NLQ96MC4 621 aa11.1□□□□□ -0.63
CASC4-208ENST00000559151 OR10A4Q9H209 315 aa11.1□□□□□ -0.63
CASC4-208ENST00000559151 FOXP1Q9H334 677 aaPredicted RBP11.1□□□□□ -0.63
CASC4-208ENST00000559151 C11orf21Q9P2W6 132 aa11.1□□□□□ -0.63
CASC4-208ENST00000559151 TTC7AQ9ULT0 858 aaPredicted RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms