RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 YKT6O15498 198 aa7.44□□□□□ -1.22
SPG11-213ENST00000558988 CREB3O43889 395 aa7.44□□□□□ -1.22
SPG11-213ENST00000558988 RFPL3O75679 317 aa7.44□□□□□ -1.22
SPG11-213ENST00000558988 KRT3P12035 628 aa7.44□□□□□ -1.22
SPG11-213ENST00000558988 MYF5P13349 255 aa7.44□□□□□ -1.22
SPG11-213ENST00000558988 GPD1P21695 349 aa7.44□□□□□ -1.22
SPG11-213ENST00000558988 MMP8P22894 467 aa7.44□□□□□ -1.22
SPG11-213ENST00000558988 AKT2P31751 481 aa7.44□□□□□ -1.22
SPG11-213ENST00000558988 ADRA1BP35368 520 aa7.44□□□□□ -1.22
SPG11-213ENST00000558988 HNF1BP35680 557 aa7.44□□□□□ -1.22
SPG11-213ENST00000558988 CCNHP51946 323 aaPredicted RBP7.44□□□□□ -1.22
SPG11-213ENST00000558988 NEK3P51956 506 aa7.44□□□□□ -1.22
SPG11-213ENST00000558988 ARF5P84085 180 aa7.44□□□□□ -1.22
SPG11-213ENST00000558988 MYL5Q02045 173 aa7.44□□□□□ -1.22
SPG11-213ENST00000558988 POLD3Q15054 466 aaPredicted RBP7.44□□□□□ -1.22
SPG11-213ENST00000558988 TCEA2Q15560 299 aa7.44□□□□□ -1.22
SPG11-213ENST00000558988 COL28A1Q2UY09 1125 aa7.44□□□□□ -1.22
SPG11-213ENST00000558988 CCDC14Q49A88 953 aa7.44□□□□□ -1.22
SPG11-213ENST00000558988 C5orf22Q49AR2 442 aa7.44□□□□□ -1.22
SPG11-213ENST00000558988 HS1BP3Q53T59 392 aa7.44□□□□□ -1.22
SPG11-213ENST00000558988 CARD16Q5EG05 197 aa7.44□□□□□ -1.22
SPG11-213ENST00000558988 ATXN7L2Q5T6C5 722 aaPredicted RBP7.44□□□□□ -1.22
SPG11-213ENST00000558988 HES3Q5TGS1 186 aa7.44□□□□□ -1.22
SPG11-213ENST00000558988 FAM72AQ5TYM5 149 aa7.44□□□□□ -1.22
SPG11-213ENST00000558988 FAM72DQ6L9T8 149 aa7.44□□□□□ -1.22
SPG11-213ENST00000558988 DNAJC24Q6P3W2 148 aa7.44□□□□□ -1.22
SPG11-213ENST00000558988 KDM7AQ6ZMT4 941 aa7.44□□□□□ -1.22
SPG11-213ENST00000558988 ERN2Q76MJ5 926 aaKnown RBP7.44□□□□□ -1.22
SPG11-213ENST00000558988 PARS2Q7L3T8 475 aaKnown RBP7.44□□□□□ -1.22
SPG11-213ENST00000558988 HORMAD1Q86X24 394 aa7.44□□□□□ -1.22
SPG11-213ENST00000558988 FAM72BQ86X60 149 aa7.44□□□□□ -1.22
SPG11-213ENST00000558988 PHACTR4Q8IZ21 702 aa7.44□□□□□ -1.22
SPG11-213ENST00000558988 PYROXD2Q8N2H3 581 aa7.44□□□□□ -1.22
SPG11-213ENST00000558988 PAF1Q8N7H5 531 aa7.44□□□□□ -1.22
SPG11-213ENST00000558988 NT5C3BQ969T7 300 aa7.44□□□□□ -1.22
SPG11-213ENST00000558988 TBC1D31Q96DN5 1066 aa7.44□□□□□ -1.22
SPG11-213ENST00000558988 PGAP3Q96FM1 320 aaPredicted RBP7.44□□□□□ -1.22
SPG11-213ENST00000558988 MCEEQ96PE7 176 aa7.44□□□□□ -1.22
SPG11-213ENST00000558988 HAPLN3Q96S86 360 aa7.44□□□□□ -1.22
SPG11-213ENST00000558988 PCDHB18PQ96TA0 734 aa7.44□□□□□ -1.22
SPG11-213ENST00000558988 HEPHQ9BQS7 1158 aa7.44□□□□□ -1.22
SPG11-213ENST00000558988 UCKL1Q9NWZ5 548 aa7.44□□□□□ -1.22
SPG11-213ENST00000558988 DNAJC28Q9NX36 388 aa7.44□□□□□ -1.22
SPG11-213ENST00000558988 ARHGAP20Q9P2F6 1191 aa7.44□□□□□ -1.22
SPG11-213ENST00000558988 HPCAL4Q9UM19 191 aa7.44□□□□□ -1.22
SPG11-213ENST00000558988 DMTF1Q9Y222 760 aa7.44□□□□□ -1.22
SPG11-213ENST00000558988 AK5Q9Y6K8 562 aa7.44□□□□□ -1.22
SPG11-213ENST00000558988 DOCK4Q8N1I0 1966 aa7.43□□□□□ -1.22
SPG11-213ENST00000558988 IGLV3-10A0A075B6K4 115 aa7.43□□□□□ -1.22
SPG11-213ENST00000558988 C2CD4BA6NLJ0 364 aa7.43□□□□□ -1.22
SPG11-213ENST00000558988 LGALS16A8MUM7 142 aa7.43□□□□□ -1.22
SPG11-213ENST00000558988 TRIM38O00635 465 aa7.43□□□□□ -1.22
SPG11-213ENST00000558988 CCP110O43303 1012 aa7.43□□□□□ -1.22
SPG11-213ENST00000558988 BUB1O43683 1085 aa7.43□□□□□ -1.22
SPG11-213ENST00000558988 SIGLEC6O43699 453 aa7.43□□□□□ -1.22
SPG11-213ENST00000558988 MAGEC1O60732 1142 aa7.43□□□□□ -1.22
SPG11-213ENST00000558988 RAMP2O60895 175 aa7.43□□□□□ -1.22
SPG11-213ENST00000558988 PAK4O96013 591 aaPredicted RBP7.43□□□□□ -1.22
SPG11-213ENST00000558988 CYP1A1P04798 512 aaPredicted RBP7.43□□□□□ -1.22
SPG11-213ENST00000558988 CALB1P05937 261 aa7.43□□□□□ -1.22
SPG11-213ENST00000558988 UGT2B4P06133 528 aa7.43□□□□□ -1.22
SPG11-213ENST00000558988 PLEKP08567 350 aaPredicted RBP7.43□□□□□ -1.22
SPG11-213ENST00000558988 ADRB3P13945 408 aa7.43□□□□□ -1.22
SPG11-213ENST00000558988 HNRNPA2B1P22626 353 aaKnown RBP7.43□□□□□ -1.22
SPG11-213ENST00000558988 EPHB2P29323 1055 aa7.43□□□□□ -1.22
SPG11-213ENST00000558988 RFC1P35251 1148 aaPredicted RBP7.43□□□□□ -1.22
SPG11-213ENST00000558988 ACADVLP49748 655 aa7.43□□□□□ -1.22
SPG11-213ENST00000558988 HDAC4P56524 1084 aa7.43□□□□□ -1.22
SPG11-213ENST00000558988 JAM2P57087 298 aa7.43□□□□□ -1.22
SPG11-213ENST00000558988 TAGLNQ01995 201 aaKnown RBP7.43□□□□□ -1.22
SPG11-213ENST00000558988 SEMG2Q02383 582 aa7.43□□□□□ -1.22
SPG11-213ENST00000558988 CCDC15Q0P6D6 951 aa7.43□□□□□ -1.22
SPG11-213ENST00000558988 ZNF284Q2VY69 593 aa7.43□□□□□ -1.22
SPG11-213ENST00000558988 BICRALQ6AI39 1079 aa7.43□□□□□ -1.22
SPG11-213ENST00000558988 DCUN1D2Q6PH85 259 aa7.43□□□□□ -1.22
SPG11-213ENST00000558988 TRIM72Q6ZMU5 477 aa7.43□□□□□ -1.22
SPG11-213ENST00000558988 Q6ZSR6 202 aa7.43□□□□□ -1.22
SPG11-213ENST00000558988 ZNF677Q86XU0 584 aa7.43□□□□□ -1.22
SPG11-213ENST00000558988 DNAAF5Q86Y56 855 aa7.43□□□□□ -1.22
SPG11-213ENST00000558988 PCDH20Q8N6Y1 951 aaKnown RBP7.43□□□□□ -1.22
SPG11-213ENST00000558988 TMIEQ8NEW7 156 aa7.43□□□□□ -1.22
SPG11-213ENST00000558988 ZBTB8AQ96BR9 441 aa7.43□□□□□ -1.22
SPG11-213ENST00000558988 LRIG1Q96JA1 1093 aa7.43□□□□□ -1.22
SPG11-213ENST00000558988 EXOC2Q96KP1 924 aa7.43□□□□□ -1.22
SPG11-213ENST00000558988 C1orf74Q96LT6 269 aa7.43□□□□□ -1.22
SPG11-213ENST00000558988 OSBPL2Q9H1P3 480 aa7.43□□□□□ -1.22
SPG11-213ENST00000558988 ANO10Q9NW15 660 aa7.43□□□□□ -1.22
SPG11-213ENST00000558988 GPATCH2LQ9NWQ4 482 aa7.43□□□□□ -1.22
SPG11-213ENST00000558988 PPP4R1LQ9P1A2 415 aa7.43□□□□□ -1.22
SPG11-213ENST00000558988 HECAQ9UBI9 543 aaPredicted RBP7.43□□□□□ -1.22
SPG11-213ENST00000558988 IPO11Q9UI26 975 aaKnown RBP7.43□□□□□ -1.22
SPG11-213ENST00000558988 GGT7Q9UJ14 662 aa7.43□□□□□ -1.22
SPG11-213ENST00000558988 ZFR2Q9UPR6 939 aaKnown RBP7.43□□□□□ -1.22
SPG11-213ENST00000558988 SIK3Q9Y2K2 1263 aa7.43□□□□□ -1.22
SPG11-213ENST00000558988 TRPM6Q9BX84 2022 aa7.43□□□□□ -1.22
SPG11-213ENST00000558988 FAM221BA6H8Z2 402 aa7.42□□□□□ -1.22
SPG11-213ENST00000558988 IGLON5A6NGN9 336 aa7.42□□□□□ -1.22
SPG11-213ENST00000558988 A6NNZ2 444 aa7.42□□□□□ -1.22
SPG11-213ENST00000558988 NPIPB8E9PQR5 432 aa7.42□□□□□ -1.22
SPG11-213ENST00000558988 SCAMP1O15126 338 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms