RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 PMPCBO75439 489 aa8.46□□□□□ -1.06
TPM1-213ENST00000558400 CLDN7O95471 211 aa8.46□□□□□ -1.06
TPM1-213ENST00000558400 MT-CYBP00156 380 aaPredicted RBP8.46□□□□□ -1.06
TPM1-213ENST00000558400 ATXN1LP0C7T5 689 aaKnown RBP8.46□□□□□ -1.06
TPM1-213ENST00000558400 MYCLP1P12525 358 aaPredicted RBP8.46□□□□□ -1.06
TPM1-213ENST00000558400 CKMT1AP12532 417 aa8.46□□□□□ -1.06
TPM1-213ENST00000558400 GM2AP17900 193 aa8.46□□□□□ -1.06
TPM1-213ENST00000558400 HLA-DPA1P20036 260 aa8.46□□□□□ -1.06
TPM1-213ENST00000558400 LHCGRP22888 699 aa8.46□□□□□ -1.06
TPM1-213ENST00000558400 ACP1P24666 158 aa8.46□□□□□ -1.06
TPM1-213ENST00000558400 RBL1P28749 1068 aa8.46□□□□□ -1.06
TPM1-213ENST00000558400 CD68P34810 354 aaPredicted RBP8.46□□□□□ -1.06
TPM1-213ENST00000558400 ETV3P41162 512 aa8.46□□□□□ -1.06
TPM1-213ENST00000558400 SPINT3P49223 89 aa8.46□□□□□ -1.06
TPM1-213ENST00000558400 STC1P52823 247 aa8.46□□□□□ -1.06
TPM1-213ENST00000558400 GEMP55040 296 aa8.46□□□□□ -1.06
TPM1-213ENST00000558400 DAB2P98082 770 aa8.46□□□□□ -1.06
TPM1-213ENST00000558400 FOXC1Q12948 553 aa8.46□□□□□ -1.06
TPM1-213ENST00000558400 IHHQ14623 411 aa8.46□□□□□ -1.06
TPM1-213ENST00000558400 ANKRD20A2Q5SQ80 823 aa8.46□□□□□ -1.06
TPM1-213ENST00000558400 SEL1L2Q5TEA6 688 aa8.46□□□□□ -1.06
TPM1-213ENST00000558400 ANKRD20A1Q5TYW2 823 aa8.46□□□□□ -1.06
TPM1-213ENST00000558400 ANKRD20A3Q5VUR7 823 aa8.46□□□□□ -1.06
TPM1-213ENST00000558400 ZDHHC20Q5W0Z9 365 aa8.46□□□□□ -1.06
TPM1-213ENST00000558400 RAET1GQ6H3X3 334 aa8.46□□□□□ -1.06
TPM1-213ENST00000558400 ZCCHC8Q6NZY4 707 aaKnown RBP8.46□□□□□ -1.06
TPM1-213ENST00000558400 TSPAN33Q86UF1 283 aa8.46□□□□□ -1.06
TPM1-213ENST00000558400 TMPRSS12Q86WS5 348 aa8.46□□□□□ -1.06
TPM1-213ENST00000558400 HID1Q8IV36 788 aa8.46□□□□□ -1.06
TPM1-213ENST00000558400 ZNF567Q8N184 647 aa8.46□□□□□ -1.06
TPM1-213ENST00000558400 CACTIN-AS1Q8N1I8 211 aa8.46□□□□□ -1.06
TPM1-213ENST00000558400 PLA2G15Q8NCC3 412 aa8.46□□□□□ -1.06
TPM1-213ENST00000558400 ZNF548Q8NEK5 533 aaPredicted RBP8.46□□□□□ -1.06
TPM1-213ENST00000558400 OR6C4Q8NGE1 309 aa8.46□□□□□ -1.06
TPM1-213ENST00000558400 LMX1AQ8TE12 382 aa8.46□□□□□ -1.06
TPM1-213ENST00000558400 MAIP1Q8WWC4 291 aa8.46□□□□□ -1.06
TPM1-213ENST00000558400 ZCCHC14Q8WYQ9 949 aaKnown RBP8.46□□□□□ -1.06
TPM1-213ENST00000558400 FUBP1Q96AE4 644 aaKnown RBP8.46□□□□□ -1.06
TPM1-213ENST00000558400 HIC2Q96JB3 615 aa8.46□□□□□ -1.06
TPM1-213ENST00000558400 TRIB3Q96RU7 358 aa8.46□□□□□ -1.06
TPM1-213ENST00000558400 MFRPQ9BY79 579 aa8.46□□□□□ -1.06
TPM1-213ENST00000558400 CEP41Q9BYV8 373 aa8.46□□□□□ -1.06
TPM1-213ENST00000558400 GPR63Q9BZJ6 419 aa8.46□□□□□ -1.06
TPM1-213ENST00000558400 ABCG8Q9H221 673 aa8.46□□□□□ -1.06
TPM1-213ENST00000558400 FAM83DQ9H4H8 585 aa8.46□□□□□ -1.06
TPM1-213ENST00000558400 UCKL1Q9NWZ5 548 aa8.46□□□□□ -1.06
TPM1-213ENST00000558400 KLF15Q9UIH9 416 aa8.46□□□□□ -1.06
TPM1-213ENST00000558400 MSRB2Q9Y3D2 182 aa8.46□□□□□ -1.06
TPM1-213ENST00000558400 NEUROG3Q9Y4Z2 214 aa8.46□□□□□ -1.06
TPM1-213ENST00000558400 PLXNA2O75051 1894 aa8.45□□□□□ -1.06
TPM1-213ENST00000558400 C5orf60A6NFR6 353 aa8.45□□□□□ -1.06
TPM1-213ENST00000558400 TRIM38O00635 465 aa8.45□□□□□ -1.06
TPM1-213ENST00000558400 YY2O15391 372 aa8.45□□□□□ -1.06
TPM1-213ENST00000558400 FFAR2O15552 330 aa8.45□□□□□ -1.06
TPM1-213ENST00000558400 KCNN4O15554 427 aa8.45□□□□□ -1.06
TPM1-213ENST00000558400 PSMD3O43242 534 aa8.45□□□□□ -1.06
TPM1-213ENST00000558400 ZSCAN12O43309 604 aa8.45□□□□□ -1.06
TPM1-213ENST00000558400 PPFIA2O75334 1257 aa8.45□□□□□ -1.06
TPM1-213ENST00000558400 RFPL3O75679 317 aa8.45□□□□□ -1.06
TPM1-213ENST00000558400 GP1BAP07359 652 aa8.45□□□□□ -1.06
TPM1-213ENST00000558400 GIMD1P0DJR0 217 aa8.45□□□□□ -1.06
TPM1-213ENST00000558400 NFKB1P19838 968 aa8.45□□□□□ -1.06
TPM1-213ENST00000558400 ACTN2P35609 894 aa8.45□□□□□ -1.06
TPM1-213ENST00000558400 HMGCLP35914 325 aa8.45□□□□□ -1.06
TPM1-213ENST00000558400 WNT3AP56704 352 aa8.45□□□□□ -1.06
TPM1-213ENST00000558400 CCZ1BP86790 482 aa8.45□□□□□ -1.06
TPM1-213ENST00000558400 CCZ1P86791 482 aaPredicted RBP8.45□□□□□ -1.06
TPM1-213ENST00000558400 CDK3Q00526 305 aa8.45□□□□□ -1.06
TPM1-213ENST00000558400 KLF1Q13351 362 aaPredicted RBP8.45□□□□□ -1.06
TPM1-213ENST00000558400 PCSK7Q16549 785 aa8.45□□□□□ -1.06
TPM1-213ENST00000558400 CDKN3Q16667 212 aa8.45□□□□□ -1.06
TPM1-213ENST00000558400 PARP6Q2NL67 630 aa8.45□□□□□ -1.06
TPM1-213ENST00000558400 ALG11Q2TAA5 492 aa8.45□□□□□ -1.06
TPM1-213ENST00000558400 PROX2Q3B8N5 592 aa8.45□□□□□ -1.06
TPM1-213ENST00000558400 SOWAHCQ53LP3 525 aaPredicted RBP8.45□□□□□ -1.06
TPM1-213ENST00000558400 TPRG1LQ5T0D9 272 aa8.45□□□□□ -1.06
TPM1-213ENST00000558400 MEI1Q5TIA1 1274 aa8.45□□□□□ -1.06
TPM1-213ENST00000558400 PDPK2PQ6A1A2 396 aa8.45□□□□□ -1.06
TPM1-213ENST00000558400 ADAMTSL4Q6UY14 1074 aa8.45□□□□□ -1.06
TPM1-213ENST00000558400 B4GALNT4Q76KP1 1039 aa8.45□□□□□ -1.06
TPM1-213ENST00000558400 TMPRSS7Q7RTY8 843 aa8.45□□□□□ -1.06
TPM1-213ENST00000558400 RD3Q7Z3Z2 195 aa8.45□□□□□ -1.06
TPM1-213ENST00000558400 KDELC2Q7Z4H8 507 aa8.45□□□□□ -1.06
TPM1-213ENST00000558400 TMC3Q7Z5M5 1100 aa8.45□□□□□ -1.06
TPM1-213ENST00000558400 HEATR4Q86WZ0 1026 aa8.45□□□□□ -1.06
TPM1-213ENST00000558400 SPNS2Q8IVW8 549 aa8.45□□□□□ -1.06
TPM1-213ENST00000558400 CHCHD4Q8N4Q1 142 aa8.45□□□□□ -1.06
TPM1-213ENST00000558400 PNPLA1Q8N8W4 532 aa8.45□□□□□ -1.06
TPM1-213ENST00000558400 SPATA22Q8NHS9 363 aa8.45□□□□□ -1.06
TPM1-213ENST00000558400 DTX3LQ8TDB6 740 aa8.45□□□□□ -1.06
TPM1-213ENST00000558400 GATA6Q92908 595 aa8.45□□□□□ -1.06
TPM1-213ENST00000558400 TSACCQ96A04 125 aaPredicted RBP8.45□□□□□ -1.06
TPM1-213ENST00000558400 APOLD1Q96LR9 279 aa8.45□□□□□ -1.06
TPM1-213ENST00000558400 SCNM1Q9BWG6 230 aa8.45□□□□□ -1.06
TPM1-213ENST00000558400 FSD1LQ9BXM9 530 aa8.45□□□□□ -1.06
TPM1-213ENST00000558400 KRTAP3-3Q9BYR6 98 aa8.45□□□□□ -1.06
TPM1-213ENST00000558400 KRTAP3-2Q9BYR7 98 aa8.45□□□□□ -1.06
TPM1-213ENST00000558400 GBA3Q9H227 469 aa8.45□□□□□ -1.06
TPM1-213ENST00000558400 CARD9Q9H257 536 aa8.45□□□□□ -1.06
TPM1-213ENST00000558400 LZTFL1Q9NQ48 299 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms